RNA–Protein interactions for RNA: ENST00000527237.1

TRIM3-205, Transcript of tripartite motif containing 3, humanhuman

TSL 1 (best)

Gene TRIM3, Length 339 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-205ENST00000527237 SERPINA10Q9UK55 444 aa22.44■■□□□ 1.18
TRIM3-205ENST00000527237 MS4A1P11836 297 aa22.43■■□□□ 1.18
TRIM3-205ENST00000527237 PRDX5P30044 214 aa22.43■■□□□ 1.18
TRIM3-205ENST00000527237 RASGRF1Q13972 1273 aa22.43■■□□□ 1.18
TRIM3-205ENST00000527237 C2orf69Q8N8R5 385 aa22.43■■□□□ 1.18
TRIM3-205ENST00000527237 TDRD3Q9H7E2 651 aaKnown RBP22.43■■□□□ 1.18
TRIM3-205ENST00000527237 SURF6O75683 361 aaKnown RBP22.42■■□□□ 1.18
TRIM3-205ENST00000527237 ECE1P42892 770 aa22.42■■□□□ 1.18
TRIM3-205ENST00000527237 SPDYE2Q495Y8 402 aa22.42■■□□□ 1.18
TRIM3-205ENST00000527237 HHIPL1Q96JK4 782 aa22.42■■□□□ 1.18
TRIM3-205ENST00000527237 NEUROD6Q96NK8 337 aa22.42■■□□□ 1.18
TRIM3-205ENST00000527237 DDX19BQ9UMR2 479 aa22.42■■□□□ 1.18
TRIM3-205ENST00000527237 FZD1Q9UP38 647 aa22.42■■□□□ 1.18
TRIM3-205ENST00000527237 AKAP2Q9Y2D5 859 aa22.42■■□□□ 1.18
TRIM3-205ENST00000527237 OS9Q13438 667 aaPredicted RBP22.41■■□□□ 1.18
TRIM3-205ENST00000527237 WDR66Q8TBY9 1149 aa22.41■■□□□ 1.18
TRIM3-205ENST00000527237 ZIC5Q96T25 663 aa22.41■■□□□ 1.18
TRIM3-205ENST00000527237 GNL3LQ9NVN8 582 aaKnown RBP22.41■■□□□ 1.18
TRIM3-205ENST00000527237 ZNF70Q9UC06 446 aaPredicted RBP22.41■■□□□ 1.18
TRIM3-205ENST00000527237 MYO1BO43795 1136 aa22.4■■□□□ 1.18
TRIM3-205ENST00000527237 PI16Q6UXB8 463 aa22.4■■□□□ 1.18
TRIM3-205ENST00000527237 DEFB129Q9H1M3 183 aa22.4■■□□□ 1.18
TRIM3-205ENST00000527237 ZBTB40Q9NUA8 1239 aa22.4■■□□□ 1.18
TRIM3-205ENST00000527237 DENND2AQ9ULE3 1009 aa22.4■■□□□ 1.18
TRIM3-205ENST00000527237 NOP58Q9Y2X3 529 aaKnown RBP22.4■■□□□ 1.18
TRIM3-205ENST00000527237 FOCADQ5VW36 1801 aa22.4■■□□□ 1.18
TRIM3-205ENST00000527237 FAM155AB1AL88 458 aaPredicted RBP22.39■■□□□ 1.17
TRIM3-205ENST00000527237 SEMA3EO15041 775 aa22.39■■□□□ 1.17
TRIM3-205ENST00000527237 FOXN1O15353 648 aa22.39■■□□□ 1.17
TRIM3-205ENST00000527237 CACNB3P54284 484 aa22.39■■□□□ 1.17
TRIM3-205ENST00000527237 PRKG1Q13976 671 aa22.39■■□□□ 1.17
TRIM3-205ENST00000527237 DIXDC1Q155Q3 683 aa22.39■■□□□ 1.17
TRIM3-205ENST00000527237 TNNI3KQ59H18 835 aa22.39■■□□□ 1.17
TRIM3-205ENST00000527237 RGMBQ6NW40 437 aa22.39■■□□□ 1.17
TRIM3-205ENST00000527237 CDAN1Q8IWY9 1227 aa22.39■■□□□ 1.17
TRIM3-205ENST00000527237 TEKT1Q969V4 418 aa22.39■■□□□ 1.17
TRIM3-205ENST00000527237 EXOC6BQ9Y2D4 811 aa22.39■■□□□ 1.17
TRIM3-205ENST00000527237 FPGT-TNNI3KV9GXZ4 949 aa22.39■■□□□ 1.17
TRIM3-205ENST00000527237 MAST3O60307 1309 aa22.38■■□□□ 1.17
TRIM3-205ENST00000527237 SALL1Q9NSC2 1324 aa22.38■■□□□ 1.17
TRIM3-205ENST00000527237 HDLBPQ00341 1268 aaKnown RBP22.38■■□□□ 1.17
TRIM3-205ENST00000527237 SUGT1Q9Y2Z0 365 aa22.38■■□□□ 1.17
TRIM3-205ENST00000527237 UBE2Q2LH0YL09 131 aa22.37■■□□□ 1.17
TRIM3-205ENST00000527237 TTLL12Q14166 644 aaPredicted RBP22.37■■□□□ 1.17
TRIM3-205ENST00000527237 SIRT2Q8IXJ6 389 aa22.37■■□□□ 1.17
TRIM3-205ENST00000527237 ZDHHC15Q96MV8 337 aa22.37■■□□□ 1.17
TRIM3-205ENST00000527237 DBNDD2Q9BQY9 259 aa22.37■■□□□ 1.17
TRIM3-205ENST00000527237 WBP1LQ9NX94 342 aa22.37■■□□□ 1.17
TRIM3-205ENST00000527237 TLR7Q9NYK1 1049 aaKnown RBP22.37■■□□□ 1.17
TRIM3-205ENST00000527237 TCP10L2B9ZVM9 353 aa22.36■■□□□ 1.17
TRIM3-205ENST00000527237 PDE3AQ14432 1141 aa22.36■■□□□ 1.17
TRIM3-205ENST00000527237 RASA3Q14644 834 aa22.36■■□□□ 1.17
TRIM3-205ENST00000527237 APOBEC3HQ6NTF7 200 aaKnown RBP22.36■■□□□ 1.17
TRIM3-205ENST00000527237 RASAL3Q86YV0 1011 aa22.36■■□□□ 1.17
TRIM3-205ENST00000527237 DAGLAQ9Y4D2 1042 aa22.36■■□□□ 1.17
TRIM3-205ENST00000527237 CASP8AP2Q9UKL3 1982 aa22.36■■□□□ 1.17
TRIM3-205ENST00000527237 MYH7P12883 1935 aa22.35■■□□□ 1.17
TRIM3-205ENST00000527237 PDS5AQ29RF7 1337 aaKnown RBP22.35■■□□□ 1.17
TRIM3-205ENST00000527237 ZBTB22O15209 634 aa22.35■■□□□ 1.17
TRIM3-205ENST00000527237 LDHBP07195 334 aaKnown RBP22.35■■□□□ 1.17
TRIM3-205ENST00000527237 SLC10A3P09131 477 aa22.35■■□□□ 1.17
TRIM3-205ENST00000527237 ARID4AP29374 1257 aaPredicted RBP22.35■■□□□ 1.17
TRIM3-205ENST00000527237 NF2P35240 595 aa22.35■■□□□ 1.17
TRIM3-205ENST00000527237 MCAMP43121 646 aa22.35■■□□□ 1.17
TRIM3-205ENST00000527237 ZNF157P51786 506 aaPredicted RBP22.35■■□□□ 1.17
TRIM3-205ENST00000527237 FKBP1BP68106 108 aa22.35■■□□□ 1.17
TRIM3-205ENST00000527237 GORABQ5T7V8 394 aa22.35■■□□□ 1.17
TRIM3-205ENST00000527237 NBPF12Q5TAG4 269 aaPredicted RBP22.35■■□□□ 1.17
TRIM3-205ENST00000527237 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.35■■□□□ 1.17
TRIM3-205ENST00000527237 GPR108Q9NPR9 543 aa22.35■■□□□ 1.17
TRIM3-205ENST00000527237 HMG20BQ9P0W2 317 aa22.35■■□□□ 1.17
TRIM3-205ENST00000527237 PPP2R3BQ9Y5P8 575 aa22.35■■□□□ 1.17
TRIM3-205ENST00000527237 HHIPL2Q6UWX4 724 aa22.34■■□□□ 1.17
TRIM3-205ENST00000527237 ABCF2Q9UG63 623 aa22.34■■□□□ 1.17
TRIM3-205ENST00000527237 TMEM39BQ9GZU3 492 aa22.33■■□□□ 1.17
TRIM3-205ENST00000527237 CCDC8Q9H0W5 538 aaPredicted RBP22.33■■□□□ 1.17
TRIM3-205ENST00000527237 DBNLQ9UJU6 430 aaKnown RBP22.33■■□□□ 1.17
TRIM3-205ENST00000527237 ANGEL1Q9UNK9 670 aaKnown RBP22.33■■□□□ 1.17
TRIM3-205ENST00000527237 MAP2K2P36507 400 aa22.32■■□□□ 1.16
TRIM3-205ENST00000527237 MAP2K1Q02750 393 aaPredicted RBP22.32■■□□□ 1.16
TRIM3-205ENST00000527237 NOGQ13253 232 aa22.32■■□□□ 1.16
TRIM3-205ENST00000527237 SPATA5Q8NB90 893 aa22.32■■□□□ 1.16
TRIM3-205ENST00000527237 ZNF384Q8TF68 577 aa22.32■■□□□ 1.16
TRIM3-205ENST00000527237 EAF2Q96CJ1 260 aaPredicted RBP22.32■■□□□ 1.16
TRIM3-205ENST00000527237 TEPSINQ96N21 525 aa22.32■■□□□ 1.16
TRIM3-205ENST00000527237 SIPA1L1O43166 1804 aa22.31■■□□□ 1.16
TRIM3-205ENST00000527237 ATAD5Q96QE3 1844 aa22.31■■□□□ 1.16
TRIM3-205ENST00000527237 TNFAIP1Q13829 316 aa22.31■■□□□ 1.16
TRIM3-205ENST00000527237 COL13A1Q5TAT6 717 aaPredicted RBP22.31■■□□□ 1.16
TRIM3-205ENST00000527237 TBC1D9Q6ZT07 1266 aa22.31■■□□□ 1.16
TRIM3-205ENST00000527237 AIDAQ96BJ3 306 aa22.31■■□□□ 1.16
TRIM3-205ENST00000527237 MRIQ9BWK5 157 aa22.31■■□□□ 1.16
TRIM3-205ENST00000527237 SNRKQ9NRH2 765 aa22.31■■□□□ 1.16
TRIM3-205ENST00000527237 TSKSQ9UJT2 592 aa22.31■■□□□ 1.16
TRIM3-205ENST00000527237 APBB1O00213 710 aa22.3■■□□□ 1.16
TRIM3-205ENST00000527237 RRP1P56182 461 aaKnown RBP22.3■■□□□ 1.16
TRIM3-205ENST00000527237 TTC39AQ5SRH9 613 aa22.3■■□□□ 1.16
TRIM3-205ENST00000527237 DZIP1Q86YF9 867 aaKnown RBP22.3■■□□□ 1.16
TRIM3-205ENST00000527237 RPAP2Q8IXW5 612 aaPredicted RBP22.3■■□□□ 1.16
TRIM3-205ENST00000527237 ZGPATQ8N5A5 531 aaKnown RBP22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms