RNA–Protein interactions for RNA: ENST00000527013.5

CHEK1-209, Transcript of checkpoint kinase 1, humanhuman

TSL 3

Gene CHEK1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-209ENST00000527013 ERO1AQ96HE7 468 aa20.31■□□□□ 0.84
CHEK1-209ENST00000527013 ZNF521Q96K83 1311 aa20.3■□□□□ 0.84
CHEK1-209ENST00000527013 CRKP46108 304 aa20.3■□□□□ 0.84
CHEK1-209ENST00000527013 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.3■□□□□ 0.84
CHEK1-209ENST00000527013 MS4A4AQ96JQ5 239 aa20.3■□□□□ 0.84
CHEK1-209ENST00000527013 VGLL2Q8N8G2 317 aa20.29■□□□□ 0.84
CHEK1-209ENST00000527013 TBC1D22AQ8WUA7 517 aa20.29■□□□□ 0.84
CHEK1-209ENST00000527013 OPTNQ96CV9 577 aa20.29■□□□□ 0.84
CHEK1-209ENST00000527013 MRIQ9BWK5 157 aa20.29■□□□□ 0.84
CHEK1-209ENST00000527013 BICC1Q9H694 974 aaKnown RBP20.29■□□□□ 0.84
CHEK1-209ENST00000527013 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.29■□□□□ 0.84
CHEK1-209ENST00000527013 TNNI2P48788 182 aa20.28■□□□□ 0.84
CHEK1-209ENST00000527013 CDAN1Q8IWY9 1227 aa20.28■□□□□ 0.84
CHEK1-209ENST00000527013 ANKRD44Q8N8A2 993 aa20.28■□□□□ 0.84
CHEK1-209ENST00000527013 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.28■□□□□ 0.84
CHEK1-209ENST00000527013 ELP3Q9H9T3 547 aa20.28■□□□□ 0.84
CHEK1-209ENST00000527013 PTPN22Q9Y2R2 807 aa20.28■□□□□ 0.84
CHEK1-209ENST00000527013 RBBP6Q7Z6E9 1792 aaKnown RBP20.27■□□□□ 0.84
CHEK1-209ENST00000527013 PDE8BO95263 885 aa20.27■□□□□ 0.84
CHEK1-209ENST00000527013 SP3Q02447 781 aa20.27■□□□□ 0.84
CHEK1-209ENST00000527013 GRIK5Q16478 980 aa20.27■□□□□ 0.84
CHEK1-209ENST00000527013 LRRC24Q50LG9 513 aa20.27■□□□□ 0.84
CHEK1-209ENST00000527013 CAVIN4Q5BKX8 364 aa20.27■□□□□ 0.84
CHEK1-209ENST00000527013 TMEM39BQ9GZU3 492 aa20.27■□□□□ 0.84
CHEK1-209ENST00000527013 KIF16BQ96L93 1317 aa20.27■□□□□ 0.83
CHEK1-209ENST00000527013 TCP10L2B9ZVM9 353 aa20.26■□□□□ 0.83
CHEK1-209ENST00000527013 MAP3K9P80192 1104 aa20.26■□□□□ 0.83
CHEK1-209ENST00000527013 VGLL4Q14135 290 aa20.26■□□□□ 0.83
CHEK1-209ENST00000527013 VPS37DQ86XT2 251 aa20.26■□□□□ 0.83
CHEK1-209ENST00000527013 FAM9BQ8IZU0 186 aa20.26■□□□□ 0.83
CHEK1-209ENST00000527013 MRPL50Q8N5N7 158 aaKnown RBP20.26■□□□□ 0.83
CHEK1-209ENST00000527013 CD99L2Q8TCZ2 262 aa20.26■□□□□ 0.83
CHEK1-209ENST00000527013 PTPRCP08575 1304 aa20.26■□□□□ 0.83
CHEK1-209ENST00000527013 GTF2A2P52657 109 aa20.25■□□□□ 0.83
CHEK1-209ENST00000527013 METTL24Q5JXM2 366 aa20.25■□□□□ 0.83
CHEK1-209ENST00000527013 FKBP1CQ5VVH2 108 aa20.25■□□□□ 0.83
CHEK1-209ENST00000527013 BRI3BPQ8WY22 251 aa20.25■□□□□ 0.83
CHEK1-209ENST00000527013 TEKT1Q969V4 418 aa20.25■□□□□ 0.83
CHEK1-209ENST00000527013 ARMC5Q96C12 935 aa20.25■□□□□ 0.83
CHEK1-209ENST00000527013 ZDHHC15Q96MV8 337 aa20.25■□□□□ 0.83
CHEK1-209ENST00000527013 EFCC1Q9HA90 598 aa20.25■□□□□ 0.83
CHEK1-209ENST00000527013 SUGT1Q9Y2Z0 365 aa20.25■□□□□ 0.83
CHEK1-209ENST00000527013 CENPFP49454 3210 aa20.25■□□□□ 0.83
CHEK1-209ENST00000527013 ZNF316A6NFI3 1004 aaPredicted RBP20.24■□□□□ 0.83
CHEK1-209ENST00000527013 FAM83AQ86UY5 434 aa20.24■□□□□ 0.83
CHEK1-209ENST00000527013 IQSEC3Q9UPP2 1182 aaPredicted RBP20.24■□□□□ 0.83
CHEK1-209ENST00000527013 CSADQ9Y600 493 aa20.24■□□□□ 0.83
CHEK1-209ENST00000527013 POTEFA5A3E0 1075 aa20.23■□□□□ 0.83
CHEK1-209ENST00000527013 FGFR2P21802 821 aa20.23■□□□□ 0.83
CHEK1-209ENST00000527013 CAP1Q01518 475 aa20.23■□□□□ 0.83
CHEK1-209ENST00000527013 CNKSR2Q8WXI2 1034 aa20.23■□□□□ 0.83
CHEK1-209ENST00000527013 USP44Q9H0E7 712 aa20.23■□□□□ 0.83
CHEK1-209ENST00000527013 MKI67P46013 3256 aaKnown RBP20.23■□□□□ 0.83
CHEK1-209ENST00000527013 SPDYE5A6NIY4 337 aa20.22■□□□□ 0.83
CHEK1-209ENST00000527013 FRAT2O75474 233 aaPredicted RBP20.22■□□□□ 0.83
CHEK1-209ENST00000527013 BCAMP50895 628 aa20.22■□□□□ 0.83
CHEK1-209ENST00000527013 CHAF1AQ13111 956 aaPredicted RBP20.22■□□□□ 0.83
CHEK1-209ENST00000527013 APOBEC3HQ6NTF7 200 aaKnown RBP20.22■□□□□ 0.83
CHEK1-209ENST00000527013 ZCCHC17Q9NP64 241 aaKnown RBP20.22■□□□□ 0.83
CHEK1-209ENST00000527013 MAST3O60307 1309 aa20.22■□□□□ 0.83
CHEK1-209ENST00000527013 CCL15-CCL14A0A0B4J2E2 113 aa20.21■□□□□ 0.83
CHEK1-209ENST00000527013 ARHGEF6Q15052 776 aa20.21■□□□□ 0.83
CHEK1-209ENST00000527013 PUM3Q15397 648 aaKnown RBP20.21■□□□□ 0.83
CHEK1-209ENST00000527013 CCL15Q16663 113 aa20.21■□□□□ 0.83
CHEK1-209ENST00000527013 HHIPL2Q6UWX4 724 aa20.21■□□□□ 0.83
CHEK1-209ENST00000527013 HOOK2Q96ED9 719 aa20.21■□□□□ 0.83
CHEK1-209ENST00000527013 OTUD5Q96G74 571 aa20.21■□□□□ 0.83
CHEK1-209ENST00000527013 ZFYVE28Q9HCC9 887 aa20.21■□□□□ 0.83
CHEK1-209ENST00000527013 RPAP1Q9BWH6 1393 aaPredicted RBP20.21■□□□□ 0.83
CHEK1-209ENST00000527013 IFIT1P09914 478 aaKnown RBP20.2■□□□□ 0.82
CHEK1-209ENST00000527013 ZEB1P37275 1124 aaPredicted RBP20.2■□□□□ 0.82
CHEK1-209ENST00000527013 TAF1CQ15572 869 aaPredicted RBP20.2■□□□□ 0.82
CHEK1-209ENST00000527013 ERO1BQ86YB8 467 aa20.2■□□□□ 0.82
CHEK1-209ENST00000527013 FAM43AQ8N2R8 423 aa20.2■□□□□ 0.82
CHEK1-209ENST00000527013 KLHDC4Q8TBB5 520 aa20.2■□□□□ 0.82
CHEK1-209ENST00000527013 TMOD2Q9NZR1 351 aa20.2■□□□□ 0.82
CHEK1-209ENST00000527013 SNCAIPQ9Y6H5 919 aa20.2■□□□□ 0.82
CHEK1-209ENST00000527013 CACNB3P54284 484 aa20.19■□□□□ 0.82
CHEK1-209ENST00000527013 SSH1Q8WYL5 1049 aa20.19■□□□□ 0.82
CHEK1-209ENST00000527013 GCC1Q96CN9 775 aa20.19■□□□□ 0.82
CHEK1-209ENST00000527013 E9PSI1 815 aa20.18■□□□□ 0.82
CHEK1-209ENST00000527013 CETPP11597 493 aa20.18■□□□□ 0.82
CHEK1-209ENST00000527013 RFX5P48382 616 aaPredicted RBP20.18■□□□□ 0.82
CHEK1-209ENST00000527013 ZNF333Q96JL9 665 aa20.18■□□□□ 0.82
CHEK1-209ENST00000527013 WRNIP1Q96S55 665 aa20.18■□□□□ 0.82
CHEK1-209ENST00000527013 KIAA0100Q14667 2235 aaKnown RBP20.17■□□□□ 0.82
CHEK1-209ENST00000527013 EYA2O00167 538 aa20.17■□□□□ 0.82
CHEK1-209ENST00000527013 TLR2O60603 784 aa20.17■□□□□ 0.82
CHEK1-209ENST00000527013 WDR66Q8TBY9 1149 aa20.17■□□□□ 0.82
CHEK1-209ENST00000527013 BRCA2P51587 3418 aa20.17■□□□□ 0.82
CHEK1-209ENST00000527013 IRF6O14896 467 aa20.16■□□□□ 0.82
CHEK1-209ENST00000527013 WDHD1O75717 1129 aaPredicted RBP20.16■□□□□ 0.82
CHEK1-209ENST00000527013 SNAPC2Q13487 334 aa20.16■□□□□ 0.82
CHEK1-209ENST00000527013 DCAF15Q66K64 600 aa20.16■□□□□ 0.82
CHEK1-209ENST00000527013 LPIN2Q92539 896 aa20.16■□□□□ 0.82
CHEK1-209ENST00000527013 ZKSCAN4Q969J2 545 aaPredicted RBP20.16■□□□□ 0.82
CHEK1-209ENST00000527013 FBXO3Q9UK99 471 aa20.16■□□□□ 0.82
CHEK1-209ENST00000527013 BTBD19C9JJ37 291 aa20.15■□□□□ 0.82
CHEK1-209ENST00000527013 SLC5A1P13866 664 aa20.15■□□□□ 0.82
CHEK1-209ENST00000527013 EN2P19622 333 aaPredicted RBP20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms