RNA–Protein interactions for RNA: ENST00000526866.5

CDC27-203, Transcript of cell division cycle 27, humanhuman

TSL 2

Gene CDC27, Length 1,420 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-203ENST00000526866 HTTP42858 3142 aa23.33■■□□□ 1.33
CDC27-203ENST00000526866 TESPA1A2RU30 521 aaPredicted RBP23.33■■□□□ 1.32
CDC27-203ENST00000526866 TCP10L2B9ZVM9 353 aa23.33■■□□□ 1.32
CDC27-203ENST00000526866 CD99L2Q8TCZ2 262 aa23.33■■□□□ 1.32
CDC27-203ENST00000526866 OPTNQ96CV9 577 aa23.33■■□□□ 1.32
CDC27-203ENST00000526866 BICC1Q9H694 974 aaKnown RBP23.33■■□□□ 1.32
CDC27-203ENST00000526866 RABL6Q3YEC7 729 aaPredicted RBP23.32■■□□□ 1.32
CDC27-203ENST00000526866 LRRC24Q50LG9 513 aa23.32■■□□□ 1.32
CDC27-203ENST00000526866 FBXO33Q7Z6M2 555 aa23.32■■□□□ 1.32
CDC27-203ENST00000526866 ERO1AQ96HE7 468 aa23.32■■□□□ 1.32
CDC27-203ENST00000526866 TMEM39BQ9GZU3 492 aa23.32■■□□□ 1.32
CDC27-203ENST00000526866 CHAF1AQ13111 956 aaPredicted RBP23.31■■□□□ 1.32
CDC27-203ENST00000526866 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.31■■□□□ 1.32
CDC27-203ENST00000526866 ANKRD44Q8N8A2 993 aa23.31■■□□□ 1.32
CDC27-203ENST00000526866 METTL24Q5JXM2 366 aa23.3■■□□□ 1.32
CDC27-203ENST00000526866 VPS37DQ86XT2 251 aa23.3■■□□□ 1.32
CDC27-203ENST00000526866 CNKSR2Q8WXI2 1034 aa23.3■■□□□ 1.32
CDC27-203ENST00000526866 MS4A4AQ96JQ5 239 aa23.3■■□□□ 1.32
CDC27-203ENST00000526866 PTPN22Q9Y2R2 807 aa23.3■■□□□ 1.32
CDC27-203ENST00000526866 TNNI2P48788 182 aa23.29■■□□□ 1.32
CDC27-203ENST00000526866 MRPL50Q8N5N7 158 aaKnown RBP23.29■■□□□ 1.32
CDC27-203ENST00000526866 POTEFA5A3E0 1075 aa23.28■■□□□ 1.32
CDC27-203ENST00000526866 CAP1Q01518 475 aa23.28■■□□□ 1.32
CDC27-203ENST00000526866 SP3Q02447 781 aa23.28■■□□□ 1.32
CDC27-203ENST00000526866 VGLL4Q14135 290 aa23.28■■□□□ 1.32
CDC27-203ENST00000526866 VGLL2Q8N8G2 317 aa23.28■■□□□ 1.32
CDC27-203ENST00000526866 ZNF521Q96K83 1311 aa23.28■■□□□ 1.32
CDC27-203ENST00000526866 ZNF316A6NFI3 1004 aaPredicted RBP23.27■■□□□ 1.32
CDC27-203ENST00000526866 FRAT2O75474 233 aaPredicted RBP23.27■■□□□ 1.32
CDC27-203ENST00000526866 PDE8BO95263 885 aa23.27■■□□□ 1.32
CDC27-203ENST00000526866 MAP3K9P80192 1104 aa23.27■■□□□ 1.32
CDC27-203ENST00000526866 CAVIN4Q5BKX8 364 aa23.27■■□□□ 1.32
CDC27-203ENST00000526866 INTS3Q68E01 1043 aaKnown RBP23.27■■□□□ 1.32
CDC27-203ENST00000526866 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.27■■□□□ 1.32
CDC27-203ENST00000526866 KLHDC4Q8TBB5 520 aa23.27■■□□□ 1.32
CDC27-203ENST00000526866 TBC1D22AQ8WUA7 517 aa23.27■■□□□ 1.32
CDC27-203ENST00000526866 BRI3BPQ8WY22 251 aa23.27■■□□□ 1.32
CDC27-203ENST00000526866 EFCC1Q9HA90 598 aa23.27■■□□□ 1.32
CDC27-203ENST00000526866 PCDH10Q9P2E7 1040 aa23.27■■□□□ 1.32
CDC27-203ENST00000526866 CACNB3P54284 484 aa23.26■■□□□ 1.31
CDC27-203ENST00000526866 HDLBPQ00341 1268 aaKnown RBP23.26■■□□□ 1.31
CDC27-203ENST00000526866 RBBP6Q7Z6E9 1792 aaKnown RBP23.26■■□□□ 1.31
CDC27-203ENST00000526866 CENPFP49454 3210 aa23.26■■□□□ 1.31
CDC27-203ENST00000526866 CCL15-CCL14A0A0B4J2E2 113 aa23.25■■□□□ 1.31
CDC27-203ENST00000526866 BCAMP50895 628 aa23.25■■□□□ 1.31
CDC27-203ENST00000526866 CCL15Q16663 113 aa23.25■■□□□ 1.31
CDC27-203ENST00000526866 TEKT1Q969V4 418 aa23.25■■□□□ 1.31
CDC27-203ENST00000526866 CSADQ9Y600 493 aa23.25■■□□□ 1.31
CDC27-203ENST00000526866 GTF2A2P52657 109 aa23.24■■□□□ 1.31
CDC27-203ENST00000526866 TAF1CQ15572 869 aaPredicted RBP23.24■■□□□ 1.31
CDC27-203ENST00000526866 OTUD5Q96G74 571 aa23.24■■□□□ 1.31
CDC27-203ENST00000526866 PTPRCP08575 1304 aa23.23■■□□□ 1.31
CDC27-203ENST00000526866 FAM43AQ8N2R8 423 aa23.23■■□□□ 1.31
CDC27-203ENST00000526866 ARMC5Q96C12 935 aa23.23■■□□□ 1.31
CDC27-203ENST00000526866 ZDHHC15Q96MV8 337 aa23.23■■□□□ 1.31
CDC27-203ENST00000526866 USP44Q9H0E7 712 aa23.23■■□□□ 1.31
CDC27-203ENST00000526866 MKI67P46013 3256 aaKnown RBP23.22■■□□□ 1.31
CDC27-203ENST00000526866 FGFR2P21802 821 aa23.22■■□□□ 1.31
CDC27-203ENST00000526866 MRIQ9BWK5 157 aa23.22■■□□□ 1.31
CDC27-203ENST00000526866 ZFYVE28Q9HCC9 887 aa23.22■■□□□ 1.31
CDC27-203ENST00000526866 SNCAIPQ9Y6H5 919 aa23.22■■□□□ 1.31
CDC27-203ENST00000526866 SPDYE5A6NIY4 337 aa23.21■■□□□ 1.31
CDC27-203ENST00000526866 APOBEC3HQ6NTF7 200 aaKnown RBP23.21■■□□□ 1.31
CDC27-203ENST00000526866 SSH1Q8WYL5 1049 aa23.21■■□□□ 1.31
CDC27-203ENST00000526866 TMOD2Q9NZR1 351 aa23.21■■□□□ 1.31
CDC27-203ENST00000526866 MYH13Q9UKX3 1938 aa23.21■■□□□ 1.31
CDC27-203ENST00000526866 IFIT1P09914 478 aaKnown RBP23.2■■□□□ 1.3
CDC27-203ENST00000526866 PUM3Q15397 648 aaKnown RBP23.2■■□□□ 1.3
CDC27-203ENST00000526866 FAM83AQ86UY5 434 aa23.2■■□□□ 1.3
CDC27-203ENST00000526866 WRNIP1Q96S55 665 aa23.2■■□□□ 1.3
CDC27-203ENST00000526866 MAST3O60307 1309 aa23.19■■□□□ 1.3
CDC27-203ENST00000526866 KIF16BQ96L93 1317 aa23.19■■□□□ 1.3
CDC27-203ENST00000526866 BRCA2P51587 3418 aa23.19■■□□□ 1.3
CDC27-203ENST00000526866 ZKSCAN4Q969J2 545 aaPredicted RBP23.19■■□□□ 1.3
CDC27-203ENST00000526866 SUGT1Q9Y2Z0 365 aa23.19■■□□□ 1.3
CDC27-203ENST00000526866 KIAA0100Q14667 2235 aaKnown RBP23.19■■□□□ 1.3
CDC27-203ENST00000526866 EN2P19622 333 aaPredicted RBP23.18■■□□□ 1.3
CDC27-203ENST00000526866 RFX5P48382 616 aaPredicted RBP23.18■■□□□ 1.3
CDC27-203ENST00000526866 FKBP1CQ5VVH2 108 aa23.18■■□□□ 1.3
CDC27-203ENST00000526866 HHIPL2Q6UWX4 724 aa23.18■■□□□ 1.3
CDC27-203ENST00000526866 ERO1BQ86YB8 467 aa23.18■■□□□ 1.3
CDC27-203ENST00000526866 EYA2O00167 538 aa23.17■■□□□ 1.3
CDC27-203ENST00000526866 PTCH2Q9Y6C5 1203 aa23.17■■□□□ 1.3
CDC27-203ENST00000526866 ZSWIM8A7E2V4 1837 aa23.17■■□□□ 1.3
CDC27-203ENST00000526866 CETPP11597 493 aa23.16■■□□□ 1.3
CDC27-203ENST00000526866 ZEB1P37275 1124 aaPredicted RBP23.16■■□□□ 1.3
CDC27-203ENST00000526866 RPAP1Q9BWH6 1393 aaPredicted RBP23.16■■□□□ 1.3
CDC27-203ENST00000526866 BTBD19C9JJ37 291 aa23.16■■□□□ 1.3
CDC27-203ENST00000526866 E9PSI1 815 aa23.16■■□□□ 1.3
CDC27-203ENST00000526866 IRF6O14896 467 aa23.16■■□□□ 1.3
CDC27-203ENST00000526866 SLC5A1P13866 664 aa23.16■■□□□ 1.3
CDC27-203ENST00000526866 ARHGEF6Q15052 776 aa23.16■■□□□ 1.3
CDC27-203ENST00000526866 HOOK2Q96ED9 719 aa23.16■■□□□ 1.3
CDC27-203ENST00000526866 ZNF333Q96JL9 665 aa23.16■■□□□ 1.3
CDC27-203ENST00000526866 PPIL2Q13356 520 aa23.15■■□□□ 1.3
CDC27-203ENST00000526866 DCAF15Q66K64 600 aa23.15■■□□□ 1.3
CDC27-203ENST00000526866 MIGA2Q7L4E1 593 aa23.15■■□□□ 1.3
CDC27-203ENST00000526866 LPIN2Q92539 896 aa23.15■■□□□ 1.3
CDC27-203ENST00000526866 TLR2O60603 784 aa23.14■■□□□ 1.29
CDC27-203ENST00000526866 SNAPC2Q13487 334 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms