RNA–Protein interactions for RNA: ENST00000525367.1

USP47-206, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 434 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-206ENST00000525367 TFE3P19532 575 aaPredicted RBP7.33□□□□□ -1.24
USP47-206ENST00000525367 ALAS2P22557 587 aa7.33□□□□□ -1.24
USP47-206ENST00000525367 CDC27P30260 824 aa7.33□□□□□ -1.24
USP47-206ENST00000525367 AFF1P51825 1210 aaKnown RBP7.33□□□□□ -1.24
USP47-206ENST00000525367 RPS26P11Q5JNZ5 115 aaPredicted RBP7.33□□□□□ -1.24
USP47-206ENST00000525367 TTBK2Q6IQ55 1244 aa7.33□□□□□ -1.24
USP47-206ENST00000525367 CHSY3Q70JA7 882 aa7.33□□□□□ -1.24
USP47-206ENST00000525367 IL22RA1Q8N6P7 574 aa7.33□□□□□ -1.24
USP47-206ENST00000525367 GALNT6Q8NCL4 622 aa7.33□□□□□ -1.24
USP47-206ENST00000525367 ZNF417Q8TAU3 575 aa7.33□□□□□ -1.24
USP47-206ENST00000525367 ZNF587Q96SQ5 575 aaPredicted RBP7.33□□□□□ -1.24
USP47-206ENST00000525367 PPP1R1BQ9UD71 204 aaPredicted RBP7.33□□□□□ -1.24
USP47-206ENST00000525367 PCDHB5Q9Y5E4 795 aa7.33□□□□□ -1.24
USP47-206ENST00000525367 LINC01387J3KSC0 135 aa7.32□□□□□ -1.24
USP47-206ENST00000525367 SOX1O00570 391 aaPredicted RBP7.32□□□□□ -1.24
USP47-206ENST00000525367 GARTP22102 1010 aa7.32□□□□□ -1.24
USP47-206ENST00000525367 CANXP27824 592 aaKnown RBP7.32□□□□□ -1.24
USP47-206ENST00000525367 DNAJA1P31689 397 aaKnown RBP7.32□□□□□ -1.24
USP47-206ENST00000525367 FBXL19Q6PCT2 694 aa7.32□□□□□ -1.24
USP47-206ENST00000525367 MPRIPQ6WCQ1 1025 aa7.32□□□□□ -1.24
USP47-206ENST00000525367 RELL1Q8IUW5 271 aa7.32□□□□□ -1.24
USP47-206ENST00000525367 GRIN3AQ8TCU5 1115 aa7.32□□□□□ -1.24
USP47-206ENST00000525367 EDARADDQ8WWZ3 215 aa7.32□□□□□ -1.24
USP47-206ENST00000525367 DRC1Q96MC2 740 aa7.32□□□□□ -1.24
USP47-206ENST00000525367 SPON2Q9BUD6 331 aa7.32□□□□□ -1.24
USP47-206ENST00000525367 CARD10Q9BWT7 1032 aa7.32□□□□□ -1.24
USP47-206ENST00000525367 CEP44Q9C0F1 390 aa7.32□□□□□ -1.24
USP47-206ENST00000525367 TMEM39AQ9NV64 488 aa7.32□□□□□ -1.24
USP47-206ENST00000525367 KRTAP9-6A0A140TA67 174 aa7.31□□□□□ -1.24
USP47-206ENST00000525367 ECEL1O95672 775 aa7.31□□□□□ -1.24
USP47-206ENST00000525367 BMP6P22004 513 aa7.31□□□□□ -1.24
USP47-206ENST00000525367 EIF4A3P38919 411 aaKnown RBP7.31□□□□□ -1.24
USP47-206ENST00000525367 SEPT6Q14141 434 aa7.31□□□□□ -1.24
USP47-206ENST00000525367 IKBKEQ14164 716 aa7.31□□□□□ -1.24
USP47-206ENST00000525367 SLC7A3Q8WY07 619 aa7.31□□□□□ -1.24
USP47-206ENST00000525367 TTC9Q92623 222 aa7.31□□□□□ -1.24
USP47-206ENST00000525367 EAF1Q96JC9 268 aaPredicted RBP7.31□□□□□ -1.24
USP47-206ENST00000525367 PSMG3-AS1Q96PY0 264 aa7.31□□□□□ -1.24
USP47-206ENST00000525367 H3BRJ5 948 aa7.3□□□□□ -1.24
USP47-206ENST00000525367 OIP5O43482 229 aa7.3□□□□□ -1.24
USP47-206ENST00000525367 CAMK2GQ13555 558 aaPredicted RBP7.3□□□□□ -1.24
USP47-206ENST00000525367 AGMOQ6ZNB7 445 aa7.3□□□□□ -1.24
USP47-206ENST00000525367 KIAA0825Q8IV33 1275 aa7.3□□□□□ -1.24
USP47-206ENST00000525367 SULF2Q8IWU5 870 aa7.3□□□□□ -1.24
USP47-206ENST00000525367 ZNF296Q8WUU4 475 aaPredicted RBP7.3□□□□□ -1.24
USP47-206ENST00000525367 GPRASP2Q96D09 838 aa7.3□□□□□ -1.24
USP47-206ENST00000525367 BTBD6Q96KE9 485 aa7.3□□□□□ -1.24
USP47-206ENST00000525367 TANGO6Q9C0B7 1094 aa7.3□□□□□ -1.24
USP47-206ENST00000525367 ZFYVE1Q9HBF4 777 aa7.3□□□□□ -1.24
USP47-206ENST00000525367 ENAMQ9NRM1 1142 aa7.3□□□□□ -1.24
USP47-206ENST00000525367 UBP1Q9NZI7 540 aa7.3□□□□□ -1.24
USP47-206ENST00000525367 PRKAG2Q9UGJ0 569 aa7.3□□□□□ -1.24
USP47-206ENST00000525367 CNTNAP5Q8WYK1 1306 aa7.29□□□□□ -1.24
USP47-206ENST00000525367 K7ELQ4 463 aaPredicted RBP7.29□□□□□ -1.24
USP47-206ENST00000525367 CRKP46108 304 aa7.29□□□□□ -1.24
USP47-206ENST00000525367 GJA8P48165 433 aa7.29□□□□□ -1.24
USP47-206ENST00000525367 COL9A3Q14050 684 aaPredicted RBP7.29□□□□□ -1.24
USP47-206ENST00000525367 BNC2Q6ZN30 1099 aaPredicted RBP7.29□□□□□ -1.24
USP47-206ENST00000525367 Q8N3U1 123 aa7.29□□□□□ -1.24
USP47-206ENST00000525367 SLC43A3Q8NBI5 491 aa7.29□□□□□ -1.24
USP47-206ENST00000525367 GOLM1Q8NBJ4 401 aa7.29□□□□□ -1.24
USP47-206ENST00000525367 FBXO27Q8NI29 283 aa7.29□□□□□ -1.24
USP47-206ENST00000525367 DHX38Q92620 1227 aaKnown RBP7.29□□□□□ -1.24
USP47-206ENST00000525367 ZC3H12CQ9C0D7 883 aaKnown RBP7.29□□□□□ -1.24
USP47-206ENST00000525367 LILRB5O75023 590 aa7.28□□□□□ -1.24
USP47-206ENST00000525367 F13A1P00488 732 aa7.28□□□□□ -1.24
USP47-206ENST00000525367 CTSBP07858 339 aa7.28□□□□□ -1.24
USP47-206ENST00000525367 BCRP11274 1271 aa7.28□□□□□ -1.24
USP47-206ENST00000525367 HOXB4P17483 251 aaPredicted RBP7.28□□□□□ -1.24
USP47-206ENST00000525367 NME2P22392 152 aa7.28□□□□□ -1.24
USP47-206ENST00000525367 GSTM4Q03013 218 aa7.28□□□□□ -1.24
USP47-206ENST00000525367 PTPN11Q06124 597 aaPredicted RBP7.28□□□□□ -1.24
USP47-206ENST00000525367 PWP1Q13610 501 aa7.28□□□□□ -1.24
USP47-206ENST00000525367 SNAP47Q5SQN1 464 aa7.28□□□□□ -1.24
USP47-206ENST00000525367 BEND7Q8N7W2 519 aaPredicted RBP7.28□□□□□ -1.24
USP47-206ENST00000525367 GAL3ST3Q96A11 431 aa7.28□□□□□ -1.24
USP47-206ENST00000525367 CBX8Q9HC52 389 aa7.28□□□□□ -1.24
USP47-206ENST00000525367 TM4SF5O14894 197 aa7.27□□□□□ -1.25
USP47-206ENST00000525367 TLR3O15455 904 aaKnown RBP7.27□□□□□ -1.25
USP47-206ENST00000525367 AMPD1P23109 780 aa7.27□□□□□ -1.25
USP47-206ENST00000525367 CABP4P57796 275 aa7.27□□□□□ -1.25
USP47-206ENST00000525367 LMNB2Q03252 620 aa7.27□□□□□ -1.25
USP47-206ENST00000525367 PPP2R3AQ06190 1150 aa7.27□□□□□ -1.25
USP47-206ENST00000525367 SF3A1Q15459 793 aaKnown RBP7.27□□□□□ -1.25
USP47-206ENST00000525367 PDZD3Q86UT5 571 aa7.27□□□□□ -1.25
USP47-206ENST00000525367 MCF2L2Q86YR7 1114 aa7.27□□□□□ -1.25
USP47-206ENST00000525367 JARID2Q92833 1246 aaPredicted RBP7.27□□□□□ -1.25
USP47-206ENST00000525367 KCNQ5Q9NR82 932 aa7.27□□□□□ -1.25
USP47-206ENST00000525367 PPME1Q9Y570 386 aa7.27□□□□□ -1.25
USP47-206ENST00000525367 FAM177BA6PVY3 158 aa7.26□□□□□ -1.25
USP47-206ENST00000525367 FSCN2O14926 492 aa7.26□□□□□ -1.25
USP47-206ENST00000525367 GREM1O60565 184 aa7.26□□□□□ -1.25
USP47-206ENST00000525367 FGRP09769 529 aa7.26□□□□□ -1.25
USP47-206ENST00000525367 RLBP1P12271 317 aa7.26□□□□□ -1.25
USP47-206ENST00000525367 NID1P14543 1247 aa7.26□□□□□ -1.25
USP47-206ENST00000525367 ARNTP27540 789 aa7.26□□□□□ -1.25
USP47-206ENST00000525367 CDK8P49336 464 aa7.26□□□□□ -1.25
USP47-206ENST00000525367 ZNF252P-AS1Q0IIN9 211 aa7.26□□□□□ -1.25
USP47-206ENST00000525367 GNL2Q13823 731 aaKnown RBP7.26□□□□□ -1.25
USP47-206ENST00000525367 MSL1Q68DK7 614 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms