RNA–Protein interactions for RNA: ENST00000524797.1

TRAPPC4-204, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,924 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-204ENST00000524797 ZNF70Q9UC06 446 aaPredicted RBP13.88□□□□□ -0.19
TRAPPC4-204ENST00000524797 OTOFQ9HC10 1997 aa13.87□□□□□ -0.19
TRAPPC4-204ENST00000524797 HDLBPQ00341 1268 aaKnown RBP13.87□□□□□ -0.19
TRAPPC4-204ENST00000524797 DZIP1LQ8IYY4 767 aaKnown RBP13.87□□□□□ -0.19
TRAPPC4-204ENST00000524797 LAMB1P07942 1786 aa13.86□□□□□ -0.19
TRAPPC4-204ENST00000524797 CA12O43570 354 aa13.86□□□□□ -0.19
TRAPPC4-204ENST00000524797 ARMC9Q7Z3E5 817 aa13.86□□□□□ -0.19
TRAPPC4-204ENST00000524797 TDRD3Q9H7E2 651 aaKnown RBP13.86□□□□□ -0.19
TRAPPC4-204ENST00000524797 TSKSQ9UJT2 592 aa13.86□□□□□ -0.19
TRAPPC4-204ENST00000524797 SUGT1Q9Y2Z0 365 aa13.86□□□□□ -0.19
TRAPPC4-204ENST00000524797 CASP8AP2Q9UKL3 1982 aa13.86□□□□□ -0.19
TRAPPC4-204ENST00000524797 RLBP1P12271 317 aa13.86□□□□□ -0.19
TRAPPC4-204ENST00000524797 ADORA1P30542 326 aa13.86□□□□□ -0.19
TRAPPC4-204ENST00000524797 PHKA1P46020 1223 aa13.86□□□□□ -0.19
TRAPPC4-204ENST00000524797 PRKG1Q13976 671 aa13.86□□□□□ -0.19
TRAPPC4-204ENST00000524797 FTSJ3Q8IY81 847 aaKnown RBP13.86□□□□□ -0.19
TRAPPC4-204ENST00000524797 WDR66Q8TBY9 1149 aa13.86□□□□□ -0.19
TRAPPC4-204ENST00000524797 MAST3O60307 1309 aa13.86□□□□□ -0.19
TRAPPC4-204ENST00000524797 MYH2Q9UKX2 1941 aa13.85□□□□□ -0.19
TRAPPC4-204ENST00000524797 PNMA6EA0A0J9YXQ4 647 aa13.85□□□□□ -0.19
TRAPPC4-204ENST00000524797 TFCP2Q12800 502 aa13.85□□□□□ -0.19
TRAPPC4-204ENST00000524797 TEKT1Q969V4 418 aa13.85□□□□□ -0.19
TRAPPC4-204ENST00000524797 MRIQ9BWK5 157 aa13.85□□□□□ -0.19
TRAPPC4-204ENST00000524797 GNL3LQ9NVN8 582 aaKnown RBP13.85□□□□□ -0.19
TRAPPC4-204ENST00000524797 ANGEL1Q9UNK9 670 aaKnown RBP13.85□□□□□ -0.19
TRAPPC4-204ENST00000524797 ZBTB22O15209 634 aa13.84□□□□□ -0.19
TRAPPC4-204ENST00000524797 RASA3Q14644 834 aa13.84□□□□□ -0.19
TRAPPC4-204ENST00000524797 SEMA3EO15041 775 aa13.84□□□□□ -0.19
TRAPPC4-204ENST00000524797 TIMM10P62072 90 aa13.84□□□□□ -0.19
TRAPPC4-204ENST00000524797 TNFAIP1Q13829 316 aa13.84□□□□□ -0.19
TRAPPC4-204ENST00000524797 MAP3K11Q16584 847 aa13.84□□□□□ -0.19
TRAPPC4-204ENST00000524797 SUPT20HL1Q3ZLR7 823 aa13.84□□□□□ -0.19
TRAPPC4-204ENST00000524797 LDLRAD1Q5T700 205 aa13.84□□□□□ -0.19
TRAPPC4-204ENST00000524797 NBPF12Q5TAG4 269 aaPredicted RBP13.84□□□□□ -0.19
TRAPPC4-204ENST00000524797 ITPRIPQ8IWB1 547 aa13.84□□□□□ -0.19
TRAPPC4-204ENST00000524797 ZDHHC15Q96MV8 337 aa13.84□□□□□ -0.19
TRAPPC4-204ENST00000524797 CSRNP1Q96S65 589 aa13.84□□□□□ -0.19
TRAPPC4-204ENST00000524797 DENND2AQ9ULE3 1009 aa13.84□□□□□ -0.19
TRAPPC4-204ENST00000524797 FZD1Q9UP38 647 aa13.84□□□□□ -0.19
TRAPPC4-204ENST00000524797 AKAP2Q9Y2D5 859 aa13.84□□□□□ -0.19
TRAPPC4-204ENST00000524797 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.84□□□□□ -0.19
TRAPPC4-204ENST00000524797 A0A1B0GUL7 405 aa13.83□□□□□ -0.2
TRAPPC4-204ENST00000524797 ATP8B2P98198 1209 aa13.83□□□□□ -0.2
TRAPPC4-204ENST00000524797 POLA2Q14181 598 aa13.83□□□□□ -0.2
TRAPPC4-204ENST00000524797 CCDC102BQ68D86 513 aa13.83□□□□□ -0.2
TRAPPC4-204ENST00000524797 REM2Q8IYK8 340 aaPredicted RBP13.83□□□□□ -0.2
TRAPPC4-204ENST00000524797 C1orf115Q9H7X2 142 aa13.83□□□□□ -0.2
TRAPPC4-204ENST00000524797 SALL1Q9NSC2 1324 aa13.82□□□□□ -0.2
TRAPPC4-204ENST00000524797 TCP10L2B9ZVM9 353 aa13.82□□□□□ -0.2
TRAPPC4-204ENST00000524797 ZBTB7BO15156 539 aaPredicted RBP13.82□□□□□ -0.2
TRAPPC4-204ENST00000524797 G3BP1Q13283 466 aaKnown RBP eCLIP13.82□□□□□ -0.2
TRAPPC4-204ENST00000524797 HHIPL2Q6UWX4 724 aa13.82□□□□□ -0.2
TRAPPC4-204ENST00000524797 XAGE2Q96GT9 111 aa13.82□□□□□ -0.2
TRAPPC4-204ENST00000524797 TEPSINQ96N21 525 aa13.82□□□□□ -0.2
TRAPPC4-204ENST00000524797 SAGE1Q9NXZ1 904 aa13.82□□□□□ -0.2
TRAPPC4-204ENST00000524797 TNNI2P48788 182 aa13.82□□□□□ -0.2
TRAPPC4-204ENST00000524797 APOBEC3HQ6NTF7 200 aaKnown RBP13.82□□□□□ -0.2
TRAPPC4-204ENST00000524797 PANK1Q8TE04 598 aa13.82□□□□□ -0.2
TRAPPC4-204ENST00000524797 SSH3Q8TE77 659 aa13.82□□□□□ -0.2
TRAPPC4-204ENST00000524797 RNF186Q9NXI6 227 aa13.82□□□□□ -0.2
TRAPPC4-204ENST00000524797 AK9Q5TCS8 1911 aa13.81□□□□□ -0.2
TRAPPC4-204ENST00000524797 PPP1R12BO60237 982 aaPredicted RBP13.81□□□□□ -0.2
TRAPPC4-204ENST00000524797 CDAN1Q8IWY9 1227 aa13.81□□□□□ -0.2
TRAPPC4-204ENST00000524797 PCNTO95613 3336 aa13.81□□□□□ -0.2
TRAPPC4-204ENST00000524797 PDS5AQ29RF7 1337 aaKnown RBP13.8□□□□□ -0.2
TRAPPC4-204ENST00000524797 USP2O75604 605 aaPredicted RBP13.8□□□□□ -0.2
TRAPPC4-204ENST00000524797 LDHBP07195 334 aaKnown RBP13.8□□□□□ -0.2
TRAPPC4-204ENST00000524797 PRDX5P30044 214 aa13.8□□□□□ -0.2
TRAPPC4-204ENST00000524797 CACNB3P54284 484 aa13.8□□□□□ -0.2
TRAPPC4-204ENST00000524797 RASGRF1Q13972 1273 aa13.8□□□□□ -0.2
TRAPPC4-204ENST00000524797 MVPQ14764 893 aaKnown RBP13.8□□□□□ -0.2
TRAPPC4-204ENST00000524797 NEUROD6Q96NK8 337 aa13.8□□□□□ -0.2
TRAPPC4-204ENST00000524797 TMOD2Q9NZR1 351 aa13.8□□□□□ -0.2
TRAPPC4-204ENST00000524797 TRPA1O75762 1119 aa13.8□□□□□ -0.2
TRAPPC4-204ENST00000524797 IREB2P48200 963 aaKnown RBP13.8□□□□□ -0.2
TRAPPC4-204ENST00000524797 MKRN3Q13064 507 aaKnown RBP13.8□□□□□ -0.2
TRAPPC4-204ENST00000524797 SPRYD7Q5W111 196 aa13.8□□□□□ -0.2
TRAPPC4-204ENST00000524797 CLMNQ96JQ2 1002 aa13.8□□□□□ -0.2
TRAPPC4-204ENST00000524797 TMEM39BQ9GZU3 492 aa13.8□□□□□ -0.2
TRAPPC4-204ENST00000524797 DAGLAQ9Y4D2 1042 aa13.8□□□□□ -0.2
TRAPPC4-204ENST00000524797 UNCXA6NJT0 531 aa13.79□□□□□ -0.2
TRAPPC4-204ENST00000524797 DIXDC1Q155Q3 683 aa13.79□□□□□ -0.2
TRAPPC4-204ENST00000524797 FKBP1CQ5VVH2 108 aa13.79□□□□□ -0.2
TRAPPC4-204ENST00000524797 SLC10A4Q96EP9 437 aa13.79□□□□□ -0.2
TRAPPC4-204ENST00000524797 WNK4Q96J92 1243 aa13.79□□□□□ -0.2
TRAPPC4-204ENST00000524797 DOCK2Q92608 1830 aa13.78□□□□□ -0.2
TRAPPC4-204ENST00000524797 CAPN15O75808 1086 aa13.78□□□□□ -0.2
TRAPPC4-204ENST00000524797 MS4A1P11836 297 aa13.78□□□□□ -0.2
TRAPPC4-204ENST00000524797 TM4SF4P48230 202 aa13.78□□□□□ -0.2
TRAPPC4-204ENST00000524797 FAM83AQ86UY5 434 aa13.78□□□□□ -0.2
TRAPPC4-204ENST00000524797 ZGPATQ8N5A5 531 aaKnown RBP13.78□□□□□ -0.2
TRAPPC4-204ENST00000524797 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.78□□□□□ -0.2
TRAPPC4-204ENST00000524797 RPAP1Q9BWH6 1393 aaPredicted RBP13.78□□□□□ -0.2
TRAPPC4-204ENST00000524797 MAST2Q6P0Q8 1798 aa13.78□□□□□ -0.2
TRAPPC4-204ENST00000524797 MYO5AQ9Y4I1 1855 aaKnown RBP13.78□□□□□ -0.2
TRAPPC4-204ENST00000524797 CDC42EP5Q6NZY7 148 aa13.78□□□□□ -0.2
TRAPPC4-204ENST00000524797 GPR108Q9NPR9 543 aa13.78□□□□□ -0.2
TRAPPC4-204ENST00000524797 NOP58Q9Y2X3 529 aaKnown RBP13.78□□□□□ -0.2
TRAPPC4-204ENST00000524797 SURF6O75683 361 aaKnown RBP13.77□□□□□ -0.21
TRAPPC4-204ENST00000524797 ARID4AP29374 1257 aaPredicted RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms