RNA–Protein interactions for RNA: ENST00000524784.1

PACS1-202, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 4

Gene PACS1, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-202ENST00000524784 NSUN4Q96CB9 384 aaKnown RBP12.69□□□□□ -0.38
PACS1-202ENST00000524784 PUS7LQ9H0K6 701 aaKnown RBP12.69□□□□□ -0.38
PACS1-202ENST00000524784 SNED1Q8TER0 1413 aa12.69□□□□□ -0.38
PACS1-202ENST00000524784 KIAA1551Q9HCM1 1747 aa12.68□□□□□ -0.38
PACS1-202ENST00000524784 MAGEB6P1A0A0J9YX57 407 aa12.68□□□□□ -0.38
PACS1-202ENST00000524784 USP17L3A6NCW0 530 aa12.68□□□□□ -0.38
PACS1-202ENST00000524784 USP17L4A6NCW7 530 aa12.68□□□□□ -0.38
PACS1-202ENST00000524784 GPAA1O43292 621 aa12.68□□□□□ -0.38
PACS1-202ENST00000524784 PRDX5P30044 214 aa12.68□□□□□ -0.38
PACS1-202ENST00000524784 FKBP1AP62942 108 aaKnown RBP12.68□□□□□ -0.38
PACS1-202ENST00000524784 PTH1RQ03431 593 aa12.68□□□□□ -0.38
PACS1-202ENST00000524784 STRIP1Q5VSL9 837 aa12.68□□□□□ -0.38
PACS1-202ENST00000524784 RNF20Q5VTR2 975 aa12.68□□□□□ -0.38
PACS1-202ENST00000524784 USP17L1Q7RTZ2 530 aa12.68□□□□□ -0.38
PACS1-202ENST00000524784 JDP2Q8WYK2 163 aa12.68□□□□□ -0.38
PACS1-202ENST00000524784 MAP4K1Q92918 833 aa12.68□□□□□ -0.38
PACS1-202ENST00000524784 NOL10Q9BSC4 688 aaKnown RBP12.68□□□□□ -0.38
PACS1-202ENST00000524784 DSCC1Q9BVC3 393 aa12.68□□□□□ -0.38
PACS1-202ENST00000524784 U3KPZ7 1027 aaPredicted RBP12.68□□□□□ -0.38
PACS1-202ENST00000524784 MBD4O95243 580 aa12.67□□□□□ -0.38
PACS1-202ENST00000524784 APPP05067 770 aa12.67□□□□□ -0.38
PACS1-202ENST00000524784 GNAT2P19087 354 aa12.67□□□□□ -0.38
PACS1-202ENST00000524784 HSPA4P34932 840 aa12.67□□□□□ -0.38
PACS1-202ENST00000524784 CTNNA3Q9UI47 895 aa12.67□□□□□ -0.38
PACS1-202ENST00000524784 ZNRF3Q9ULT6 936 aa12.67□□□□□ -0.38
PACS1-202ENST00000524784 RBM8AQ9Y5S9 174 aaKnown RBP12.67□□□□□ -0.38
PACS1-202ENST00000524784 LTBP3Q9NS15 1303 aa12.66□□□□□ -0.38
PACS1-202ENST00000524784 BAG3O95817 575 aa12.66□□□□□ -0.38
PACS1-202ENST00000524784 HSPD1P10809 573 aaKnown RBP12.66□□□□□ -0.38
PACS1-202ENST00000524784 ZKSCAN1P17029 563 aaPredicted RBP12.66□□□□□ -0.38
PACS1-202ENST00000524784 ARHGAP27Q6ZUM4 889 aa12.66□□□□□ -0.38
PACS1-202ENST00000524784 MIGA1Q8NAN2 632 aa12.66□□□□□ -0.38
PACS1-202ENST00000524784 STRBPQ96SI9 672 aaKnown RBP12.66□□□□□ -0.38
PACS1-202ENST00000524784 NACAP1Q9BZK3 213 aa12.66□□□□□ -0.38
PACS1-202ENST00000524784 ARMT1Q9H993 441 aa12.66□□□□□ -0.38
PACS1-202ENST00000524784 PATL2C9JE40 543 aaKnown RBP12.65□□□□□ -0.38
PACS1-202ENST00000524784 F8W031 263 aaPredicted RBP12.65□□□□□ -0.38
PACS1-202ENST00000524784 NFKBIEO00221 500 aa12.65□□□□□ -0.38
PACS1-202ENST00000524784 ANAPC15P60006 121 aa12.65□□□□□ -0.38
PACS1-202ENST00000524784 DACT2Q5SW24 774 aa12.65□□□□□ -0.38
PACS1-202ENST00000524784 CERS3Q8IU89 383 aa12.65□□□□□ -0.38
PACS1-202ENST00000524784 KCNQ5Q9NR82 932 aa12.65□□□□□ -0.38
PACS1-202ENST00000524784 TTF2Q9UNY4 1162 aaKnown RBP12.65□□□□□ -0.38
PACS1-202ENST00000524784 SLC4A4Q9Y6R1 1079 aa12.65□□□□□ -0.38
PACS1-202ENST00000524784 MYH13Q9UKX3 1938 aa12.64□□□□□ -0.39
PACS1-202ENST00000524784 YDJCA8MPS7 323 aa12.64□□□□□ -0.39
PACS1-202ENST00000524784 NECTIN1Q15223 517 aa12.64□□□□□ -0.39
PACS1-202ENST00000524784 GRIK5Q16478 980 aa12.64□□□□□ -0.39
PACS1-202ENST00000524784 VPS53Q5VIR6 699 aa12.64□□□□□ -0.39
PACS1-202ENST00000524784 ADGRA1Q86SQ6 560 aa12.64□□□□□ -0.39
PACS1-202ENST00000524784 LCORLQ8N3X6 602 aa12.64□□□□□ -0.39
PACS1-202ENST00000524784 CERS5Q8N5B7 392 aa12.64□□□□□ -0.39
PACS1-202ENST00000524784 FAM163AQ96GL9 167 aaPredicted RBP12.64□□□□□ -0.39
PACS1-202ENST00000524784 DDRGK1Q96HY6 314 aa12.64□□□□□ -0.39
PACS1-202ENST00000524784 MXD3Q9BW11 206 aa12.64□□□□□ -0.39
PACS1-202ENST00000524784 AATFQ9NY61 560 aaKnown RBP eCLIP12.64□□□□□ -0.39
PACS1-202ENST00000524784 RPAP1Q9BWH6 1393 aaPredicted RBP12.64□□□□□ -0.39
PACS1-202ENST00000524784 MYO3BQ8WXR4 1341 aa12.63□□□□□ -0.39
PACS1-202ENST00000524784 BRCA1P38398 1863 aaKnown RBP12.63□□□□□ -0.39
PACS1-202ENST00000524784 DOCK2Q92608 1830 aa12.63□□□□□ -0.39
PACS1-202ENST00000524784 MYH7P12883 1935 aa12.63□□□□□ -0.39
PACS1-202ENST00000524784 RAD17O75943 681 aa12.63□□□□□ -0.39
PACS1-202ENST00000524784 PLCG2P16885 1265 aa12.63□□□□□ -0.39
PACS1-202ENST00000524784 PPP4CP60510 307 aa12.63□□□□□ -0.39
PACS1-202ENST00000524784 TNIP1Q15025 636 aa12.63□□□□□ -0.39
PACS1-202ENST00000524784 RABEP1Q15276 862 aa12.63□□□□□ -0.39
PACS1-202ENST00000524784 DIXDC1Q155Q3 683 aa12.63□□□□□ -0.39
PACS1-202ENST00000524784 IMMTQ16891 758 aaKnown RBP12.63□□□□□ -0.39
PACS1-202ENST00000524784 CREB3L3Q68CJ9 461 aa12.63□□□□□ -0.39
PACS1-202ENST00000524784 ZNF384Q8TF68 577 aa12.63□□□□□ -0.39
PACS1-202ENST00000524784 RIOK1Q9BRS2 568 aaKnown RBP12.63□□□□□ -0.39
PACS1-202ENST00000524784 MRIQ9BWK5 157 aa12.63□□□□□ -0.39
PACS1-202ENST00000524784 CRNKL1Q9BZJ0 848 aaKnown RBP12.63□□□□□ -0.39
PACS1-202ENST00000524784 MROH7-TTC4A0A0A0MT08 1334 aa12.62□□□□□ -0.39
PACS1-202ENST00000524784 GPR75-ASB3A0A0A6YYF3 556 aa12.62□□□□□ -0.39
PACS1-202ENST00000524784 SLC27A2O14975 620 aa12.62□□□□□ -0.39
PACS1-202ENST00000524784 FGAP02671 866 aa12.62□□□□□ -0.39
PACS1-202ENST00000524784 VIL1P09327 827 aaKnown RBP12.62□□□□□ -0.39
PACS1-202ENST00000524784 EIF6P56537 245 aaKnown RBP12.62□□□□□ -0.39
PACS1-202ENST00000524784 DYNLL1P63167 89 aaKnown RBP12.62□□□□□ -0.39
PACS1-202ENST00000524784 HDLBPQ00341 1268 aaKnown RBP12.62□□□□□ -0.39
PACS1-202ENST00000524784 RASSF7Q02833 373 aa12.62□□□□□ -0.39
PACS1-202ENST00000524784 KRT32Q14532 448 aa12.62□□□□□ -0.39
PACS1-202ENST00000524784 ALX1Q15699 326 aa12.62□□□□□ -0.39
PACS1-202ENST00000524784 CIAPIN1Q6FI81 312 aa12.62□□□□□ -0.39
PACS1-202ENST00000524784 RSBN1LQ6PCB5 846 aaPredicted RBP12.62□□□□□ -0.39
PACS1-202ENST00000524784 HHIPL2Q6UWX4 724 aa12.62□□□□□ -0.39
PACS1-202ENST00000524784 KIAA0825Q8IV33 1275 aa12.62□□□□□ -0.39
PACS1-202ENST00000524784 IL27Q8NEV9 243 aa12.62□□□□□ -0.39
PACS1-202ENST00000524784 KCNB2Q92953 911 aa12.62□□□□□ -0.39
PACS1-202ENST00000524784 TEKT1Q969V4 418 aa12.62□□□□□ -0.39
PACS1-202ENST00000524784 NAPBQ9H115 298 aa12.62□□□□□ -0.39
PACS1-202ENST00000524784 HDAC9Q9UKV0 1011 aa12.62□□□□□ -0.39
PACS1-202ENST00000524784 PSMD14O00487 310 aa12.61□□□□□ -0.39
PACS1-202ENST00000524784 ZNF213O14771 459 aa12.61□□□□□ -0.39
PACS1-202ENST00000524784 PRKAB2O43741 272 aa12.61□□□□□ -0.39
PACS1-202ENST00000524784 LMNB1P20700 586 aa12.61□□□□□ -0.39
PACS1-202ENST00000524784 PSMA5P28066 241 aa12.61□□□□□ -0.39
PACS1-202ENST00000524784 BTDP43251 543 aa12.61□□□□□ -0.39
PACS1-202ENST00000524784 TDO2P48775 406 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms