RNA–Protein interactions for RNA: ENST00000524257.5

PTK2-256, Transcript of protein tyrosine kinase 2, human

TSL 4

Gene PTK2, Length 430 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTK2-256	ENST00000524257	SUGT1	Q9Y2Z0	365 aa		13.18	□□□□□ -0.3
PTK2-256	ENST00000524257	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	13.18	□□□□□ -0.3
PTK2-256	ENST00000524257	MAST3	O60307	1309 aa		13.17	□□□□□ -0.3
PTK2-256	ENST00000524257	TTLL12	Q14166	644 aa	Predicted RBP	13.17	□□□□□ -0.3
PTK2-256	ENST00000524257	SPDYE2	Q495Y8	402 aa		13.17	□□□□□ -0.3
PTK2-256	ENST00000524257	CCDC102B	Q68D86	513 aa		13.17	□□□□□ -0.3
PTK2-256	ENST00000524257	MOB2	Q70IA6	237 aa		13.17	□□□□□ -0.3
PTK2-256	ENST00000524257	TEKT1	Q969V4	418 aa		13.17	□□□□□ -0.3
PTK2-256	ENST00000524257	XAGE2	Q96GT9	111 aa		13.17	□□□□□ -0.3
PTK2-256	ENST00000524257	NEUROD6	Q96NK8	337 aa		13.17	□□□□□ -0.3
PTK2-256	ENST00000524257	TDRD3	Q9H7E2	651 aa	Known RBP	13.17	□□□□□ -0.3
PTK2-256	ENST00000524257	ZNF70	Q9UC06	446 aa	Predicted RBP	13.17	□□□□□ -0.3
PTK2-256	ENST00000524257	DENND2A	Q9ULE3	1009 aa		13.17	□□□□□ -0.3
PTK2-256	ENST00000524257	PPP2R3B	Q9Y5P8	575 aa		13.17	□□□□□ -0.3
PTK2-256	ENST00000524257	UBE2Q2L	H0YL09	131 aa		13.16	□□□□□ -0.3
PTK2-256	ENST00000524257	SEMA3E	O15041	775 aa		13.16	□□□□□ -0.3
PTK2-256	ENST00000524257	HDLBP	Q00341	1268 aa	Known RBP	13.16	□□□□□ -0.3
PTK2-256	ENST00000524257	NOG	Q13253	232 aa		13.16	□□□□□ -0.3
PTK2-256	ENST00000524257	OS9	Q13438	667 aa	Predicted RBP	13.16	□□□□□ -0.3
PTK2-256	ENST00000524257	PRKG1	Q13976	671 aa		13.16	□□□□□ -0.3
PTK2-256	ENST00000524257	MVP	Q14764	893 aa	Known RBP	13.16	□□□□□ -0.3
PTK2-256	ENST00000524257	CCDC102A	Q96A19	550 aa		13.16	□□□□□ -0.3
PTK2-256	ENST00000524257	FAM155A	B1AL88	458 aa	Predicted RBP	13.15	□□□□□ -0.3
PTK2-256	ENST00000524257	SURF6	O75683	361 aa	Known RBP	13.15	□□□□□ -0.3
PTK2-256	ENST00000524257	SLC10A3	P09131	477 aa		13.15	□□□□□ -0.3
PTK2-256	ENST00000524257	CTCF	P49711	727 aa	Predicted RBP	13.15	□□□□□ -0.3
PTK2-256	ENST00000524257	TNFAIP1	Q13829	316 aa		13.15	□□□□□ -0.3
PTK2-256	ENST00000524257	CEP85	Q6P2H3	762 aa		13.15	□□□□□ -0.3
PTK2-256	ENST00000524257	ARMC9	Q7Z3E5	817 aa		13.15	□□□□□ -0.3
PTK2-256	ENST00000524257	ZIC5	Q96T25	663 aa		13.15	□□□□□ -0.3
PTK2-256	ENST00000524257	BEGAIN	Q9BUH8	593 aa		13.15	□□□□□ -0.3
PTK2-256	ENST00000524257	MRI	Q9BWK5	157 aa		13.15	□□□□□ -0.3
PTK2-256	ENST00000524257	COG6	Q9Y2V7	657 aa		13.15	□□□□□ -0.3
PTK2-256	ENST00000524257	SALL1	Q9NSC2	1324 aa		13.14	□□□□□ -0.31
PTK2-256	ENST00000524257	TCP10L2	B9ZVM9	353 aa		13.14	□□□□□ -0.31
PTK2-256	ENST00000524257	ZBTB22	O15209	634 aa		13.14	□□□□□ -0.31
PTK2-256	ENST00000524257	LDHB	P07195	334 aa	Known RBP	13.14	□□□□□ -0.31
PTK2-256	ENST00000524257	PRDX5	P30044	214 aa		13.14	□□□□□ -0.31
PTK2-256	ENST00000524257	RASGRF1	Q13972	1273 aa		13.14	□□□□□ -0.31
PTK2-256	ENST00000524257	RASA3	Q14644	834 aa		13.14	□□□□□ -0.31
PTK2-256	ENST00000524257	GORAB	Q5T7V8	394 aa		13.14	□□□□□ -0.31
PTK2-256	ENST00000524257	COL13A1	Q5TAT6	717 aa	Predicted RBP	13.14	□□□□□ -0.31
PTK2-256	ENST00000524257	RASAL3	Q86YV0	1011 aa		13.14	□□□□□ -0.31
PTK2-256	ENST00000524257	ZDHHC15	Q96MV8	337 aa		13.14	□□□□□ -0.31
PTK2-256	ENST00000524257	DDX19B	Q9UMR2	479 aa		13.14	□□□□□ -0.31
PTK2-256	ENST00000524257	NOP58	Q9Y2X3	529 aa	Known RBP	13.14	□□□□□ -0.31
PTK2-256	ENST00000524257	SSC5D	A1L4H1	1573 aa		13.14	□□□□□ -0.31
PTK2-256	ENST00000524257	MYH2	Q9UKX2	1941 aa		13.13	□□□□□ -0.31
PTK2-256	ENST00000524257	DIXDC1	Q155Q3	683 aa		13.13	□□□□□ -0.31
PTK2-256	ENST00000524257	SUPT20HL1	Q3ZLR7	823 aa		13.13	□□□□□ -0.31
PTK2-256	ENST00000524257	NBPF12	Q5TAG4	269 aa	Predicted RBP	13.13	□□□□□ -0.31
PTK2-256	ENST00000524257	HHIPL2	Q6UWX4	724 aa		13.13	□□□□□ -0.31
PTK2-256	ENST00000524257	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	13.13	□□□□□ -0.31
PTK2-256	ENST00000524257	GPR108	Q9NPR9	543 aa		13.13	□□□□□ -0.31
PTK2-256	ENST00000524257	ANGEL1	Q9UNK9	670 aa	Known RBP	13.13	□□□□□ -0.31
PTK2-256	ENST00000524257	FZD1	Q9UP38	647 aa		13.13	□□□□□ -0.31
PTK2-256	ENST00000524257	PDS5A	Q29RF7	1337 aa	Known RBP	13.13	□□□□□ -0.31
PTK2-256	ENST00000524257	AKAP11	Q9UKA4	1901 aa		13.12	□□□□□ -0.31
PTK2-256	ENST00000524257	HSPA8	P11142	646 aa	Known RBP	13.12	□□□□□ -0.31
PTK2-256	ENST00000524257	TNNI2	P48788	182 aa		13.12	□□□□□ -0.31
PTK2-256	ENST00000524257	LBX1	P52954	281 aa		13.12	□□□□□ -0.31
PTK2-256	ENST00000524257	CACNB3	P54284	484 aa		13.12	□□□□□ -0.31
PTK2-256	ENST00000524257	KIF23	Q02241	960 aa	Predicted RBP	13.12	□□□□□ -0.31
PTK2-256	ENST00000524257	TNNI3K	Q59H18	835 aa		13.12	□□□□□ -0.31
PTK2-256	ENST00000524257	APOBEC3H	Q6NTF7	200 aa	Known RBP	13.12	□□□□□ -0.31
PTK2-256	ENST00000524257	ZGPAT	Q8N5A5	531 aa	Known RBP	13.12	□□□□□ -0.31
PTK2-256	ENST00000524257	TMOD2	Q9NZR1	351 aa		13.12	□□□□□ -0.31
PTK2-256	ENST00000524257	DAGLA	Q9Y4D2	1042 aa		13.12	□□□□□ -0.31
PTK2-256	ENST00000524257	FPGT-TNNI3K	V9GXZ4	949 aa		13.12	□□□□□ -0.31
PTK2-256	ENST00000524257	PPP1R12B	O60237	982 aa	Predicted RBP	13.11	□□□□□ -0.31
PTK2-256	ENST00000524257	ARID4A	P29374	1257 aa	Predicted RBP	13.11	□□□□□ -0.31
PTK2-256	ENST00000524257	MAP3K11	Q16584	847 aa		13.11	□□□□□ -0.31
PTK2-256	ENST00000524257	C20orf194	Q5TEA3	1177 aa		13.11	□□□□□ -0.31
PTK2-256	ENST00000524257	YTHDC1	Q96MU7	727 aa	Known RBP	13.11	□□□□□ -0.31
PTK2-256	ENST00000524257	TMEM39B	Q9GZU3	492 aa		13.11	□□□□□ -0.31
PTK2-256	ENST00000524257	CHMP4B	Q9H444	224 aa	Known RBP	13.11	□□□□□ -0.31
PTK2-256	ENST00000524257	PRDM10	Q9NQV6	1147 aa		13.11	□□□□□ -0.31
PTK2-256	ENST00000524257	ZBTB40	Q9NUA8	1239 aa		13.11	□□□□□ -0.31
PTK2-256	ENST00000524257	HMG20B	Q9P0W2	317 aa		13.11	□□□□□ -0.31
PTK2-256	ENST00000524257	ABCF2	Q9UG63	623 aa		13.11	□□□□□ -0.31
PTK2-256	ENST00000524257	CA12	O43570	354 aa		13.1	□□□□□ -0.31
PTK2-256	ENST00000524257	UQCRFS1P1	P0C7P4	283 aa		13.1	□□□□□ -0.31
PTK2-256	ENST00000524257	PDE3A	Q14432	1141 aa		13.1	□□□□□ -0.31
PTK2-256	ENST00000524257	LDLRAD1	Q5T700	205 aa		13.1	□□□□□ -0.31
PTK2-256	ENST00000524257	SPTY2D1	Q68D10	685 aa	Predicted RBP	13.1	□□□□□ -0.31
PTK2-256	ENST00000524257	PI16	Q6UXB8	463 aa		13.1	□□□□□ -0.31
PTK2-256	ENST00000524257	CDAN1	Q8IWY9	1227 aa		13.1	□□□□□ -0.31
PTK2-256	ENST00000524257	SPATA5	Q8NB90	893 aa		13.1	□□□□□ -0.31
PTK2-256	ENST00000524257	TEPSIN	Q96N21	525 aa		13.1	□□□□□ -0.31
PTK2-256	ENST00000524257	DBNDD2	Q9BQY9	259 aa		13.1	□□□□□ -0.31
PTK2-256	ENST00000524257	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	13.1	□□□□□ -0.31
PTK2-256	ENST00000524257	TSKS	Q9UJT2	592 aa		13.1	□□□□□ -0.31
PTK2-256	ENST00000524257	EXOC6B	Q9Y2D4	811 aa		13.1	□□□□□ -0.31
PTK2-256	ENST00000524257	OTOF	Q9HC10	1997 aa		13.1	□□□□□ -0.31
PTK2-256	ENST00000524257	AK9	Q5TCS8	1911 aa		13.09	□□□□□ -0.31
PTK2-256	ENST00000524257	MCAM	P43121	646 aa		13.09	□□□□□ -0.31
PTK2-256	ENST00000524257	IREB2	P48200	963 aa	Known RBP	13.09	□□□□□ -0.31
PTK2-256	ENST00000524257	TTC39A	Q5SRH9	613 aa		13.09	□□□□□ -0.31
PTK2-256	ENST00000524257	FKBP1C	Q5VVH2	108 aa		13.09	□□□□□ -0.31
PTK2-256	ENST00000524257	CDC42EP5	Q6NZY7	148 aa		13.09	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms