RNA–Protein interactions for RNA: ENST00000523824.5

NSMCE2-213, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-213ENST00000523824 TTF2Q9UNY4 1162 aaKnown RBP10.1□□□□□ -0.79
NSMCE2-213ENST00000523824 COLQQ9Y215 455 aaPredicted RBP10.1□□□□□ -0.79
NSMCE2-213ENST00000523824 PTCH2Q9Y6C5 1203 aa10.1□□□□□ -0.79
NSMCE2-213ENST00000523824 MKI67P46013 3256 aaKnown RBP10.09□□□□□ -0.79
NSMCE2-213ENST00000523824 KIAA0100Q14667 2235 aaKnown RBP10.09□□□□□ -0.79
NSMCE2-213ENST00000523824 TCP10L2B9ZVM9 353 aa10.09□□□□□ -0.79
NSMCE2-213ENST00000523824 TNNI2P48788 182 aa10.09□□□□□ -0.79
NSMCE2-213ENST00000523824 FOXO4P98177 505 aa10.09□□□□□ -0.79
NSMCE2-213ENST00000523824 KIF22Q14807 665 aa10.09□□□□□ -0.79
NSMCE2-213ENST00000523824 CCDC57Q2TAC2 916 aa10.09□□□□□ -0.79
NSMCE2-213ENST00000523824 MFSD14BQ5SR56 506 aa10.09□□□□□ -0.79
NSMCE2-213ENST00000523824 LDHAL6AQ6ZMR3 332 aa10.09□□□□□ -0.79
NSMCE2-213ENST00000523824 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.09□□□□□ -0.79
NSMCE2-213ENST00000523824 BRI3BPQ8WY22 251 aa10.09□□□□□ -0.79
NSMCE2-213ENST00000523824 SERPINA10Q9UK55 444 aa10.09□□□□□ -0.79
NSMCE2-213ENST00000523824 CSADQ9Y600 493 aa10.09□□□□□ -0.79
NSMCE2-213ENST00000523824 CENPFP49454 3210 aa10.09□□□□□ -0.79
NSMCE2-213ENST00000523824 FAM205AQ6ZU69 1335 aa10.08□□□□□ -0.8
NSMCE2-213ENST00000523824 HIBADHP31937 336 aaKnown RBP10.08□□□□□ -0.8
NSMCE2-213ENST00000523824 VGLL4Q14135 290 aa10.08□□□□□ -0.8
NSMCE2-213ENST00000523824 LMBR1LQ6UX01 489 aa10.08□□□□□ -0.8
NSMCE2-213ENST00000523824 DZIP1LQ8IYY4 767 aaKnown RBP10.08□□□□□ -0.8
NSMCE2-213ENST00000523824 FAM43AQ8N2R8 423 aa10.08□□□□□ -0.8
NSMCE2-213ENST00000523824 OTUD5Q96G74 571 aa10.08□□□□□ -0.8
NSMCE2-213ENST00000523824 ZNF594Q96JF6 807 aaPredicted RBP10.08□□□□□ -0.8
NSMCE2-213ENST00000523824 TEPSINQ96N21 525 aa10.08□□□□□ -0.8
NSMCE2-213ENST00000523824 TMEM39BQ9GZU3 492 aa10.08□□□□□ -0.8
NSMCE2-213ENST00000523824 H0YGN5 161 aa10.07□□□□□ -0.8
NSMCE2-213ENST00000523824 CDAN1Q8IWY9 1227 aa10.07□□□□□ -0.8
NSMCE2-213ENST00000523824 WWC1Q8IX03 1113 aa10.07□□□□□ -0.8
NSMCE2-213ENST00000523824 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.07□□□□□ -0.8
NSMCE2-213ENST00000523824 TDRD7Q8NHU6 1098 aaKnown RBP10.07□□□□□ -0.8
NSMCE2-213ENST00000523824 SH3TC2Q8TF17 1288 aa10.07□□□□□ -0.8
NSMCE2-213ENST00000523824 BRCA2P51587 3418 aa10.06□□□□□ -0.8
NSMCE2-213ENST00000523824 TLR2O60603 784 aa10.06□□□□□ -0.8
NSMCE2-213ENST00000523824 CETPP11597 493 aa10.06□□□□□ -0.8
NSMCE2-213ENST00000523824 CRKP46108 304 aa10.06□□□□□ -0.8
NSMCE2-213ENST00000523824 GYG1P46976 350 aa10.06□□□□□ -0.8
NSMCE2-213ENST00000523824 UBE4AQ14139 1066 aa10.06□□□□□ -0.8
NSMCE2-213ENST00000523824 CCDC27Q2M243 656 aa10.06□□□□□ -0.8
NSMCE2-213ENST00000523824 DPF3Q92784 378 aa10.06□□□□□ -0.8
NSMCE2-213ENST00000523824 FAM84BQ96KN1 310 aaPredicted RBP10.06□□□□□ -0.8
NSMCE2-213ENST00000523824 RBBP6Q7Z6E9 1792 aaKnown RBP10.06□□□□□ -0.8
NSMCE2-213ENST00000523824 ECM29Q5VYK3 1845 aa10.05□□□□□ -0.8
NSMCE2-213ENST00000523824 SPDYE5A6NIY4 337 aa10.05□□□□□ -0.8
NSMCE2-213ENST00000523824 F6X3S4 739 aa10.05□□□□□ -0.8
NSMCE2-213ENST00000523824 FRAT2O75474 233 aaPredicted RBP10.05□□□□□ -0.8
NSMCE2-213ENST00000523824 ECM2O94769 699 aaPredicted RBP10.05□□□□□ -0.8
NSMCE2-213ENST00000523824 GNRH1P01148 92 aa10.05□□□□□ -0.8
NSMCE2-213ENST00000523824 PRMT2P55345 433 aa10.05□□□□□ -0.8
NSMCE2-213ENST00000523824 LACTBP83111 547 aaPredicted RBP10.05□□□□□ -0.8
NSMCE2-213ENST00000523824 SNAPC2Q13487 334 aa10.05□□□□□ -0.8
NSMCE2-213ENST00000523824 EPHA10Q5JZY3 1008 aa10.05□□□□□ -0.8
NSMCE2-213ENST00000523824 BEND3Q5T5X7 828 aa10.05□□□□□ -0.8
NSMCE2-213ENST00000523824 VPS37DQ86XT2 251 aa10.05□□□□□ -0.8
NSMCE2-213ENST00000523824 ERO1BQ86YB8 467 aa10.05□□□□□ -0.8
NSMCE2-213ENST00000523824 HOOK2Q96ED9 719 aa10.05□□□□□ -0.8
NSMCE2-213ENST00000523824 ARHGAP39Q9C0H5 1083 aa10.05□□□□□ -0.8
NSMCE2-213ENST00000523824 ZCCHC17Q9NP64 241 aaKnown RBP10.05□□□□□ -0.8
NSMCE2-213ENST00000523824 C9orf78Q9NZ63 289 aaPredicted RBP10.05□□□□□ -0.8
NSMCE2-213ENST00000523824 IL16Q14005 1332 aa10.05□□□□□ -0.8
NSMCE2-213ENST00000523824 CEP290O15078 2479 aa10.05□□□□□ -0.8
NSMCE2-213ENST00000523824 LAMB1P07942 1786 aa10.04□□□□□ -0.8
NSMCE2-213ENST00000523824 BTBD19C9JJ37 291 aa10.04□□□□□ -0.8
NSMCE2-213ENST00000523824 GRM8O00222 908 aa10.04□□□□□ -0.8
NSMCE2-213ENST00000523824 VAMP4O75379 141 aa10.04□□□□□ -0.8
NSMCE2-213ENST00000523824 HDLBPQ00341 1268 aaKnown RBP10.04□□□□□ -0.8
NSMCE2-213ENST00000523824 CHAF1AQ13111 956 aaPredicted RBP10.04□□□□□ -0.8
NSMCE2-213ENST00000523824 CHRDL2Q6WN34 429 aa10.04□□□□□ -0.8
NSMCE2-213ENST00000523824 ZKSCAN4Q969J2 545 aaPredicted RBP10.04□□□□□ -0.8
NSMCE2-213ENST00000523824 WRNIP1Q96S55 665 aa10.04□□□□□ -0.8
NSMCE2-213ENST00000523824 TMOD2Q9NZR1 351 aa10.04□□□□□ -0.8
NSMCE2-213ENST00000523824 IRF6O14896 467 aa10.03□□□□□ -0.8
NSMCE2-213ENST00000523824 FMNL1O95466 1100 aaPredicted RBP10.03□□□□□ -0.8
NSMCE2-213ENST00000523824 HOXD10P28358 340 aa10.03□□□□□ -0.8
NSMCE2-213ENST00000523824 CACNB3P54284 484 aa10.03□□□□□ -0.8
NSMCE2-213ENST00000523824 PPIL2Q13356 520 aa10.03□□□□□ -0.8
NSMCE2-213ENST00000523824 MTFR1Q15390 333 aa10.03□□□□□ -0.8
NSMCE2-213ENST00000523824 GRIK5Q16478 980 aa10.03□□□□□ -0.8
NSMCE2-213ENST00000523824 NKX2-3Q8TAU0 364 aa10.03□□□□□ -0.8
NSMCE2-213ENST00000523824 TBC1D22AQ8WUA7 517 aa10.03□□□□□ -0.8
NSMCE2-213ENST00000523824 TEKT1Q969V4 418 aa10.03□□□□□ -0.8
NSMCE2-213ENST00000523824 PUS3Q9BZE2 481 aaKnown RBP10.03□□□□□ -0.8
NSMCE2-213ENST00000523824 IQSEC3Q9UPP2 1182 aaPredicted RBP10.03□□□□□ -0.8
NSMCE2-213ENST00000523824 SNCAIPQ9Y6H5 919 aa10.03□□□□□ -0.8
NSMCE2-213ENST00000523824 FANCIQ9NVI1 1328 aa10.03□□□□□ -0.8
NSMCE2-213ENST00000523824 PSMC4P43686 418 aa10.02□□□□□ -0.81
NSMCE2-213ENST00000523824 EXOSC9Q06265 439 aaKnown RBP10.02□□□□□ -0.81
NSMCE2-213ENST00000523824 CAVIN4Q5BKX8 364 aa10.02□□□□□ -0.81
NSMCE2-213ENST00000523824 DCAF15Q66K64 600 aa10.02□□□□□ -0.81
NSMCE2-213ENST00000523824 C17orf99Q6UX52 265 aa10.02□□□□□ -0.81
NSMCE2-213ENST00000523824 FBXO33Q7Z6M2 555 aa10.02□□□□□ -0.81
NSMCE2-213ENST00000523824 FAM83AQ86UY5 434 aa10.02□□□□□ -0.81
NSMCE2-213ENST00000523824 RAET1EQ8TD07 263 aa10.02□□□□□ -0.81
NSMCE2-213ENST00000523824 RBM27Q9P2N5 1060 aaKnown RBP10.02□□□□□ -0.81
NSMCE2-213ENST00000523824 BIN2Q9UBW5 565 aaPredicted RBP10.02□□□□□ -0.81
NSMCE2-213ENST00000523824 SRRDQ9UH36 339 aa10.02□□□□□ -0.81
NSMCE2-213ENST00000523824 CPA4Q9UI42 421 aa10.02□□□□□ -0.81
NSMCE2-213ENST00000523824 RIPOR2Q9Y4F9 1068 aa10.02□□□□□ -0.81
NSMCE2-213ENST00000523824 TRIOBPQ9H2D6 2365 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms