RNA–Protein interactions for RNA: ENST00000523417.5

TOP1MT-217, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 3

Gene TOP1MT, Length 698 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-217ENST00000523417 TESPA1A2RU30 521 aaPredicted RBP15.85■□□□□ 0.13
TOP1MT-217ENST00000523417 EYA2O00167 538 aa15.85■□□□□ 0.13
TOP1MT-217ENST00000523417 CRKP46108 304 aa15.85■□□□□ 0.13
TOP1MT-217ENST00000523417 FKBP1CQ5VVH2 108 aa15.85■□□□□ 0.13
TOP1MT-217ENST00000523417 ANKRD13AQ8IZ07 590 aa15.85■□□□□ 0.13
TOP1MT-217ENST00000523417 TDRD3Q9H7E2 651 aaKnown RBP15.85■□□□□ 0.13
TOP1MT-217ENST00000523417 VEZTQ9HBM0 779 aa15.85■□□□□ 0.13
TOP1MT-217ENST00000523417 HDAC5Q9UQL6 1122 aa15.85■□□□□ 0.13
TOP1MT-217ENST00000523417 AKAP11Q9UKA4 1901 aa15.85■□□□□ 0.13
TOP1MT-217ENST00000523417 SSC5DA1L4H1 1573 aa15.84■□□□□ 0.13
TOP1MT-217ENST00000523417 IFIT1P09914 478 aaKnown RBP15.84■□□□□ 0.13
TOP1MT-217ENST00000523417 BCAMP50895 628 aa15.84■□□□□ 0.13
TOP1MT-217ENST00000523417 PUM3Q15397 648 aaKnown RBP15.84■□□□□ 0.13
TOP1MT-217ENST00000523417 ATG9AQ7Z3C6 839 aa15.84■□□□□ 0.13
TOP1MT-217ENST00000523417 IFNL1Q8IU54 200 aa15.84■□□□□ 0.13
TOP1MT-217ENST00000523417 WNK4Q96J92 1243 aa15.84■□□□□ 0.13
TOP1MT-217ENST00000523417 FZD1Q9UP38 647 aa15.84■□□□□ 0.13
TOP1MT-217ENST00000523417 A0A1B0GUL6 1792 aa15.83■□□□□ 0.12
TOP1MT-217ENST00000523417 FKTNO75072 461 aa15.83■□□□□ 0.12
TOP1MT-217ENST00000523417 CIAO1O76071 339 aa15.83■□□□□ 0.12
TOP1MT-217ENST00000523417 TNNI2P48788 182 aa15.83■□□□□ 0.12
TOP1MT-217ENST00000523417 GRIK5Q16478 980 aa15.83■□□□□ 0.12
TOP1MT-217ENST00000523417 HHIPL2Q6UWX4 724 aa15.83■□□□□ 0.12
TOP1MT-217ENST00000523417 KLHDC4Q8TBB5 520 aa15.83■□□□□ 0.12
TOP1MT-217ENST00000523417 LPIN2Q92539 896 aa15.83■□□□□ 0.12
TOP1MT-217ENST00000523417 ARHGAP45Q92619 1136 aa15.83■□□□□ 0.12
TOP1MT-217ENST00000523417 CLMNQ96JQ2 1002 aa15.83■□□□□ 0.12
TOP1MT-217ENST00000523417 ZDHHC15Q96MV8 337 aa15.83■□□□□ 0.12
TOP1MT-217ENST00000523417 SMC4Q9NTJ3 1288 aa15.83■□□□□ 0.12
TOP1MT-217ENST00000523417 MKRN3Q13064 507 aaKnown RBP15.82■□□□□ 0.12
TOP1MT-217ENST00000523417 FAM83AQ86UY5 434 aa15.82■□□□□ 0.12
TOP1MT-217ENST00000523417 TEKT1Q969V4 418 aa15.82■□□□□ 0.12
TOP1MT-217ENST00000523417 API5Q9BZZ5 524 aaKnown RBP15.82■□□□□ 0.12
TOP1MT-217ENST00000523417 R3HDMLQ9H3Y0 253 aa15.82■□□□□ 0.12
TOP1MT-217ENST00000523417 NOB1Q9ULX3 412 aaKnown RBP15.82■□□□□ 0.12
TOP1MT-217ENST00000523417 MAST3O60307 1309 aa15.81■□□□□ 0.12
TOP1MT-217ENST00000523417 FRAT2O75474 233 aaPredicted RBP15.81■□□□□ 0.12
TOP1MT-217ENST00000523417 OTUD7BQ6GQQ9 843 aa15.81■□□□□ 0.12
TOP1MT-217ENST00000523417 APOBEC3HQ6NTF7 200 aaKnown RBP15.81■□□□□ 0.12
TOP1MT-217ENST00000523417 WDR66Q8TBY9 1149 aa15.81■□□□□ 0.12
TOP1MT-217ENST00000523417 HPS5Q9UPZ3 1129 aa15.81■□□□□ 0.12
TOP1MT-217ENST00000523417 UBTFL1P0CB47 393 aaPredicted RBP15.8■□□□□ 0.12
TOP1MT-217ENST00000523417 SLC5A1P13866 664 aa15.8■□□□□ 0.12
TOP1MT-217ENST00000523417 GJA5P36382 358 aa15.8■□□□□ 0.12
TOP1MT-217ENST00000523417 MAP3K9P80192 1104 aa15.8■□□□□ 0.12
TOP1MT-217ENST00000523417 FBXO46Q6PJ61 603 aaPredicted RBP15.8■□□□□ 0.12
TOP1MT-217ENST00000523417 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.8■□□□□ 0.12
TOP1MT-217ENST00000523417 MS4A4AQ96JQ5 239 aa15.8■□□□□ 0.12
TOP1MT-217ENST00000523417 IQSEC3Q9UPP2 1182 aaPredicted RBP15.8■□□□□ 0.12
TOP1MT-217ENST00000523417 TCP10L2B9ZVM9 353 aa15.79■□□□□ 0.12
TOP1MT-217ENST00000523417 IGF2BP3O00425 579 aaKnown RBP eCLIP15.79■□□□□ 0.12
TOP1MT-217ENST00000523417 RARSP54136 660 aaKnown RBP15.79■□□□□ 0.12
TOP1MT-217ENST00000523417 CHAF1AQ13111 956 aaPredicted RBP15.79■□□□□ 0.12
TOP1MT-217ENST00000523417 INTS3Q68E01 1043 aaKnown RBP15.79■□□□□ 0.12
TOP1MT-217ENST00000523417 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.79■□□□□ 0.12
TOP1MT-217ENST00000523417 HOOK2Q96ED9 719 aa15.79■□□□□ 0.12
TOP1MT-217ENST00000523417 TMEM39BQ9GZU3 492 aa15.79■□□□□ 0.12
TOP1MT-217ENST00000523417 COPRSQ9NQ92 184 aa15.79■□□□□ 0.12
TOP1MT-217ENST00000523417 CEP126Q9P2H0 1117 aa15.79■□□□□ 0.12
TOP1MT-217ENST00000523417 IL15P40933 162 aaPredicted RBP15.78■□□□□ 0.12
TOP1MT-217ENST00000523417 PTPN18Q99952 460 aa15.78■□□□□ 0.12
TOP1MT-217ENST00000523417 SEMA3EO15041 775 aa15.77■□□□□ 0.12
TOP1MT-217ENST00000523417 CDAN1Q8IWY9 1227 aa15.77■□□□□ 0.12
TOP1MT-217ENST00000523417 OPTNQ96CV9 577 aa15.77■□□□□ 0.12
TOP1MT-217ENST00000523417 ECM29Q5VYK3 1845 aa15.77■□□□□ 0.11
TOP1MT-217ENST00000523417 SALL1Q9NSC2 1324 aa15.76■□□□□ 0.11
TOP1MT-217ENST00000523417 GTF2A2P52657 109 aa15.76■□□□□ 0.11
TOP1MT-217ENST00000523417 MTX1Q13505 466 aa15.76■□□□□ 0.11
TOP1MT-217ENST00000523417 ELP3Q9H9T3 547 aa15.76■□□□□ 0.11
TOP1MT-217ENST00000523417 GNL3LQ9NVN8 582 aaKnown RBP15.76■□□□□ 0.11
TOP1MT-217ENST00000523417 TMOD2Q9NZR1 351 aa15.76■□□□□ 0.11
TOP1MT-217ENST00000523417 GNAI3P08754 354 aa15.75■□□□□ 0.11
TOP1MT-217ENST00000523417 VGLL4Q14135 290 aa15.75■□□□□ 0.11
TOP1MT-217ENST00000523417 ATP2B3Q16720 1220 aa15.75■□□□□ 0.11
TOP1MT-217ENST00000523417 FAM151AQ8WW52 585 aa15.75■□□□□ 0.11
TOP1MT-217ENST00000523417 LRRFIP2Q9Y608 721 aaKnown RBP15.75■□□□□ 0.11
TOP1MT-217ENST00000523417 RPAP1Q9BWH6 1393 aaPredicted RBP15.75■□□□□ 0.11
TOP1MT-217ENST00000523417 SPDYE5A6NIY4 337 aa15.74■□□□□ 0.11
TOP1MT-217ENST00000523417 IPO8O15397 1037 aaKnown RBP15.74■□□□□ 0.11
TOP1MT-217ENST00000523417 CRHR2Q13324 411 aa15.74■□□□□ 0.11
TOP1MT-217ENST00000523417 ERO1BQ86YB8 467 aa15.74■□□□□ 0.11
TOP1MT-217ENST00000523417 ERO1AQ96HE7 468 aa15.74■□□□□ 0.11
TOP1MT-217ENST00000523417 ZCCHC17Q9NP64 241 aaKnown RBP15.74■□□□□ 0.11
TOP1MT-217ENST00000523417 DENND2AQ9ULE3 1009 aa15.74■□□□□ 0.11
TOP1MT-217ENST00000523417 CSADQ9Y600 493 aa15.74■□□□□ 0.11
TOP1MT-217ENST00000523417 PDS5AQ29RF7 1337 aaKnown RBP15.73■□□□□ 0.11
TOP1MT-217ENST00000523417 CACNB3P54284 484 aa15.73■□□□□ 0.11
TOP1MT-217ENST00000523417 SOX10P56693 466 aa15.73■□□□□ 0.11
TOP1MT-217ENST00000523417 DCAF15Q66K64 600 aa15.73■□□□□ 0.11
TOP1MT-217ENST00000523417 OTOP1Q7RTM1 612 aa15.73■□□□□ 0.11
TOP1MT-217ENST00000523417 BRI3BPQ8WY22 251 aa15.73■□□□□ 0.11
TOP1MT-217ENST00000523417 FAM163AQ96GL9 167 aaPredicted RBP15.73■□□□□ 0.11
TOP1MT-217ENST00000523417 MEIS3Q99687 375 aa15.73■□□□□ 0.11
TOP1MT-217ENST00000523417 ZNF112Q9UJU3 913 aa15.73■□□□□ 0.11
TOP1MT-217ENST00000523417 DAGLAQ9Y4D2 1042 aa15.73■□□□□ 0.11
TOP1MT-217ENST00000523417 SP3Q02447 781 aa15.72■□□□□ 0.11
TOP1MT-217ENST00000523417 CDC42EP5Q6NZY7 148 aa15.72■□□□□ 0.11
TOP1MT-217ENST00000523417 SIL1Q9H173 461 aa15.72■□□□□ 0.11
TOP1MT-217ENST00000523417 SNCAIPQ9Y6H5 919 aa15.72■□□□□ 0.11
TOP1MT-217ENST00000523417 LAMB1P07942 1786 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms