RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 MMP14P50281 582 aa22.03■■□□□ 1.12
CLK4-211ENST00000522556 GRM1Q13255 1194 aa22.03■■□□□ 1.12
CLK4-211ENST00000522556 DIXDC1Q155Q3 683 aa22.03■■□□□ 1.12
CLK4-211ENST00000522556 DEFB115Q30KQ5 88 aa22.03■■□□□ 1.12
CLK4-211ENST00000522556 WDR66Q8TBY9 1149 aa22.03■■□□□ 1.12
CLK4-211ENST00000522556 EAF2Q96CJ1 260 aaPredicted RBP22.03■■□□□ 1.12
CLK4-211ENST00000522556 VEZTQ9HBM0 779 aa22.03■■□□□ 1.12
CLK4-211ENST00000522556 GBA2Q9HCG7 927 aaPredicted RBP22.03■■□□□ 1.12
CLK4-211ENST00000522556 GNL3LQ9NVN8 582 aaKnown RBP22.03■■□□□ 1.12
CLK4-211ENST00000522556 SERPINA10Q9UK55 444 aa22.03■■□□□ 1.12
CLK4-211ENST00000522556 DENND2AQ9ULE3 1009 aa22.03■■□□□ 1.12
CLK4-211ENST00000522556 FZD1Q9UP38 647 aa22.03■■□□□ 1.12
CLK4-211ENST00000522556 MYH2Q9UKX2 1941 aa22.02■■□□□ 1.12
CLK4-211ENST00000522556 APBB1O00213 710 aa22.02■■□□□ 1.12
CLK4-211ENST00000522556 CACNB3P54284 484 aa22.02■■□□□ 1.12
CLK4-211ENST00000522556 PAXIP1Q6ZW49 1069 aaPredicted RBP22.02■■□□□ 1.12
CLK4-211ENST00000522556 CDAN1Q8IWY9 1227 aa22.02■■□□□ 1.12
CLK4-211ENST00000522556 CCDC8Q9H0W5 538 aaPredicted RBP22.02■■□□□ 1.12
CLK4-211ENST00000522556 HMG20BQ9P0W2 317 aa22.02■■□□□ 1.12
CLK4-211ENST00000522556 DBNLQ9UJU6 430 aaKnown RBP22.02■■□□□ 1.12
CLK4-211ENST00000522556 SEMA3EO15041 775 aa22.01■■□□□ 1.11
CLK4-211ENST00000522556 ARID4AP29374 1257 aaPredicted RBP22.01■■□□□ 1.11
CLK4-211ENST00000522556 MCAMP43121 646 aa22.01■■□□□ 1.11
CLK4-211ENST00000522556 SPDYE2Q495Y8 402 aa22.01■■□□□ 1.11
CLK4-211ENST00000522556 APOBEC3FQ8IUX4 373 aaKnown RBP22.01■■□□□ 1.11
CLK4-211ENST00000522556 RPAP2Q8IXW5 612 aaPredicted RBP22.01■■□□□ 1.11
CLK4-211ENST00000522556 IL1RAPL2Q9NP60 686 aa22.01■■□□□ 1.11
CLK4-211ENST00000522556 GPR108Q9NPR9 543 aa22.01■■□□□ 1.11
CLK4-211ENST00000522556 ZNF70Q9UC06 446 aaPredicted RBP22.01■■□□□ 1.11
CLK4-211ENST00000522556 SALL1Q9NSC2 1324 aa22.01■■□□□ 1.11
CLK4-211ENST00000522556 HUNKP57058 714 aa22■■□□□ 1.11
CLK4-211ENST00000522556 TEKT1Q969V4 418 aa22■■□□□ 1.11
CLK4-211ENST00000522556 CAPNS2Q96L46 248 aa22■■□□□ 1.11
CLK4-211ENST00000522556 AOC2O75106 756 aa21.99■■□□□ 1.11
CLK4-211ENST00000522556 GORABQ5T7V8 394 aa21.99■■□□□ 1.11
CLK4-211ENST00000522556 APOBEC3HQ6NTF7 200 aaKnown RBP21.99■■□□□ 1.11
CLK4-211ENST00000522556 TBC1D9Q6ZT07 1266 aa21.99■■□□□ 1.11
CLK4-211ENST00000522556 CRBNQ96SW2 442 aa21.99■■□□□ 1.11
CLK4-211ENST00000522556 DEFB129Q9H1M3 183 aa21.99■■□□□ 1.11
CLK4-211ENST00000522556 SNRKQ9NRH2 765 aa21.99■■□□□ 1.11
CLK4-211ENST00000522556 DAGLAQ9Y4D2 1042 aa21.99■■□□□ 1.11
CLK4-211ENST00000522556 WDR33Q9C0J8 1336 aaKnown RBP21.99■■□□□ 1.11
CLK4-211ENST00000522556 PCNTO95613 3336 aa21.98■■□□□ 1.11
CLK4-211ENST00000522556 ZBTB22O15209 634 aa21.98■■□□□ 1.11
CLK4-211ENST00000522556 LDHBP07195 334 aaKnown RBP21.98■■□□□ 1.11
CLK4-211ENST00000522556 HDLBPQ00341 1268 aaKnown RBP21.98■■□□□ 1.11
CLK4-211ENST00000522556 RHPN1Q8TCX5 695 aa21.98■■□□□ 1.11
CLK4-211ENST00000522556 ZNF384Q8TF68 577 aa21.98■■□□□ 1.11
CLK4-211ENST00000522556 ZDHHC15Q96MV8 337 aa21.98■■□□□ 1.11
CLK4-211ENST00000522556 BCL11AQ9H165 835 aa21.98■■□□□ 1.11
CLK4-211ENST00000522556 ABCF2Q9UG63 623 aa21.98■■□□□ 1.11
CLK4-211ENST00000522556 SUGT1Q9Y2Z0 365 aa21.98■■□□□ 1.11
CLK4-211ENST00000522556 PDS5AQ29RF7 1337 aaKnown RBP21.98■■□□□ 1.11
CLK4-211ENST00000522556 TCP10L2B9ZVM9 353 aa21.97■■□□□ 1.11
CLK4-211ENST00000522556 MYO1BO43795 1136 aa21.97■■□□□ 1.11
CLK4-211ENST00000522556 PRKG1Q13976 671 aa21.97■■□□□ 1.11
CLK4-211ENST00000522556 C2orf69Q8N8R5 385 aa21.97■■□□□ 1.11
CLK4-211ENST00000522556 SPATA5Q8NB90 893 aa21.97■■□□□ 1.11
CLK4-211ENST00000522556 ZIC5Q96T25 663 aa21.97■■□□□ 1.11
CLK4-211ENST00000522556 OTOFQ9HC10 1997 aa21.97■■□□□ 1.11
CLK4-211ENST00000522556 MAST3O60307 1309 aa21.97■■□□□ 1.11
CLK4-211ENST00000522556 MAST2Q6P0Q8 1798 aa21.97■■□□□ 1.11
CLK4-211ENST00000522556 HMMRO75330 724 aa21.96■■□□□ 1.11
CLK4-211ENST00000522556 RASA3Q14644 834 aa21.96■■□□□ 1.11
CLK4-211ENST00000522556 TTC39AQ5SRH9 613 aa21.96■■□□□ 1.11
CLK4-211ENST00000522556 AACSQ86V21 672 aa21.96■■□□□ 1.11
CLK4-211ENST00000522556 PCDHB15Q9Y5E8 787 aa21.96■■□□□ 1.11
CLK4-211ENST00000522556 NDUFB9Q9Y6M9 179 aa21.96■■□□□ 1.11
CLK4-211ENST00000522556 UBE2Q2LH0YL09 131 aa21.95■■□□□ 1.1
CLK4-211ENST00000522556 NBPF12Q5TAG4 269 aaPredicted RBP21.95■■□□□ 1.1
CLK4-211ENST00000522556 HHIPL2Q6UWX4 724 aa21.95■■□□□ 1.1
CLK4-211ENST00000522556 CHMP4BQ9H444 224 aaKnown RBP21.95■■□□□ 1.1
CLK4-211ENST00000522556 HSPA1AP0DMV8 641 aaKnown RBP21.94■■□□□ 1.1
CLK4-211ENST00000522556 HSPA1BP0DMV9 641 aaKnown RBP21.94■■□□□ 1.1
CLK4-211ENST00000522556 ERC1Q8IUD2 1116 aa21.94■■□□□ 1.1
CLK4-211ENST00000522556 TMEM39BQ9GZU3 492 aa21.94■■□□□ 1.1
CLK4-211ENST00000522556 FAM155AB1AL88 458 aaPredicted RBP21.93■■□□□ 1.1
CLK4-211ENST00000522556 UQCRFS1P1P0C7P4 283 aa21.93■■□□□ 1.1
CLK4-211ENST00000522556 MECOMQ03112 1051 aa21.93■■□□□ 1.1
CLK4-211ENST00000522556 HHIPL1Q96JK4 782 aa21.93■■□□□ 1.1
CLK4-211ENST00000522556 TEPSINQ96N21 525 aa21.93■■□□□ 1.1
CLK4-211ENST00000522556 MRIQ9BWK5 157 aa21.93■■□□□ 1.1
CLK4-211ENST00000522556 GAKO14976 1311 aa21.92■■□□□ 1.1
CLK4-211ENST00000522556 SMARCA5O60264 1052 aaPredicted RBP21.92■■□□□ 1.1
CLK4-211ENST00000522556 ZAP70P43403 619 aa21.92■■□□□ 1.1
CLK4-211ENST00000522556 TTLL12Q14166 644 aaPredicted RBP21.92■■□□□ 1.1
CLK4-211ENST00000522556 CCDC158Q5M9N0 1113 aa21.92■■□□□ 1.1
CLK4-211ENST00000522556 RGMBQ6NW40 437 aa21.92■■□□□ 1.1
CLK4-211ENST00000522556 CDC42EP5Q6NZY7 148 aa21.92■■□□□ 1.1
CLK4-211ENST00000522556 DZIP1Q86YF9 867 aaKnown RBP21.92■■□□□ 1.1
CLK4-211ENST00000522556 KIF1BPQ96EK5 621 aa21.92■■□□□ 1.1
CLK4-211ENST00000522556 DOCK2Q92608 1830 aa21.92■■□□□ 1.1
CLK4-211ENST00000522556 CYP2E1P05181 493 aaPredicted RBP21.91■■□□□ 1.1
CLK4-211ENST00000522556 NFIAQ12857 509 aa21.91■■□□□ 1.1
CLK4-211ENST00000522556 HSP90AB4PQ58FF6 505 aa21.91■■□□□ 1.1
CLK4-211ENST00000522556 ZGPATQ8N5A5 531 aaKnown RBP21.91■■□□□ 1.1
CLK4-211ENST00000522556 PIH1D3Q9NQM4 214 aaKnown RBP21.91■■□□□ 1.1
CLK4-211ENST00000522556 PPP2R3BQ9Y5P8 575 aa21.91■■□□□ 1.1
CLK4-211ENST00000522556 ECE1P42892 770 aa21.9■■□□□ 1.1
CLK4-211ENST00000522556 ERICH6Q7L0X2 663 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms