RNA–Protein interactions for RNA: ENST00000522468.1

HMBOX1-209, Transcript of homeobox containing 1, humanhuman

TSL 3

Gene HMBOX1, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-209ENST00000522468 SLC10A4Q96EP9 437 aa17.69■□□□□ 0.42
HMBOX1-209ENST00000522468 BRCA2P51587 3418 aa17.69■□□□□ 0.42
HMBOX1-209ENST00000522468 KIF16BQ96L93 1317 aa17.69■□□□□ 0.42
HMBOX1-209ENST00000522468 MANSC4A6NHS7 340 aaPredicted RBP17.68■□□□□ 0.42
HMBOX1-209ENST00000522468 GJA5P36382 358 aa17.68■□□□□ 0.42
HMBOX1-209ENST00000522468 CRKP46108 304 aa17.68■□□□□ 0.42
HMBOX1-209ENST00000522468 INHBEP58166 350 aa17.68■□□□□ 0.42
HMBOX1-209ENST00000522468 HDLBPQ00341 1268 aaKnown RBP17.68■□□□□ 0.42
HMBOX1-209ENST00000522468 PKN2Q16513 984 aaKnown RBP17.68■□□□□ 0.42
HMBOX1-209ENST00000522468 IFNL1Q8IU54 200 aa17.68■□□□□ 0.42
HMBOX1-209ENST00000522468 TDRD3Q9H7E2 651 aaKnown RBP17.68■□□□□ 0.42
HMBOX1-209ENST00000522468 IQSEC3Q9UPP2 1182 aaPredicted RBP17.68■□□□□ 0.42
HMBOX1-209ENST00000522468 HPS5Q9UPZ3 1129 aa17.68■□□□□ 0.42
HMBOX1-209ENST00000522468 IGF2BP3O00425 579 aaKnown RBP eCLIP17.67■□□□□ 0.42
HMBOX1-209ENST00000522468 ALDH1A1P00352 501 aa17.67■□□□□ 0.42
HMBOX1-209ENST00000522468 TNFAIP1Q13829 316 aa17.67■□□□□ 0.42
HMBOX1-209ENST00000522468 MKI67P46013 3256 aaKnown RBP17.66■□□□□ 0.42
HMBOX1-209ENST00000522468 IREB2P48200 963 aaKnown RBP17.66■□□□□ 0.42
HMBOX1-209ENST00000522468 BCAMP50895 628 aa17.66■□□□□ 0.42
HMBOX1-209ENST00000522468 SOX10P56693 466 aa17.66■□□□□ 0.42
HMBOX1-209ENST00000522468 ANKRD13AQ8IZ07 590 aa17.66■□□□□ 0.42
HMBOX1-209ENST00000522468 TBC1D22AQ8WUA7 517 aa17.66■□□□□ 0.42
HMBOX1-209ENST00000522468 MRIQ9BWK5 157 aa17.66■□□□□ 0.42
HMBOX1-209ENST00000522468 TESPA1A2RU30 521 aaPredicted RBP17.65■□□□□ 0.42
HMBOX1-209ENST00000522468 EYA2O00167 538 aa17.65■□□□□ 0.42
HMBOX1-209ENST00000522468 FKTNO75072 461 aa17.65■□□□□ 0.42
HMBOX1-209ENST00000522468 PUM3Q15397 648 aaKnown RBP17.65■□□□□ 0.42
HMBOX1-209ENST00000522468 CAVIN4Q5BKX8 364 aa17.65■□□□□ 0.42
HMBOX1-209ENST00000522468 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.65■□□□□ 0.42
HMBOX1-209ENST00000522468 ATG9AQ7Z3C6 839 aa17.65■□□□□ 0.42
HMBOX1-209ENST00000522468 VPS37DQ86XT2 251 aa17.65■□□□□ 0.42
HMBOX1-209ENST00000522468 TMEM39BQ9GZU3 492 aa17.65■□□□□ 0.42
HMBOX1-209ENST00000522468 CHAF1AQ13111 956 aaPredicted RBP17.64■□□□□ 0.41
HMBOX1-209ENST00000522468 PTPN18Q99952 460 aa17.64■□□□□ 0.41
HMBOX1-209ENST00000522468 SMC4Q9NTJ3 1288 aa17.64■□□□□ 0.41
HMBOX1-209ENST00000522468 TCP10L2B9ZVM9 353 aa17.63■□□□□ 0.41
HMBOX1-209ENST00000522468 CT47B1P0C2W7 299 aaPredicted RBP17.63■□□□□ 0.41
HMBOX1-209ENST00000522468 APOBEC3HQ6NTF7 200 aaKnown RBP17.63■□□□□ 0.41
HMBOX1-209ENST00000522468 FBXO46Q6PJ61 603 aaPredicted RBP17.63■□□□□ 0.41
HMBOX1-209ENST00000522468 MS4A4AQ96JQ5 239 aa17.63■□□□□ 0.41
HMBOX1-209ENST00000522468 ZDHHC15Q96MV8 337 aa17.63■□□□□ 0.41
HMBOX1-209ENST00000522468 SUGT1Q9Y2Z0 365 aa17.63■□□□□ 0.41
HMBOX1-209ENST00000522468 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.62■□□□□ 0.411e-11■■□□□ 13.1
HMBOX1-209ENST00000522468 LPIN2Q92539 896 aa17.62■□□□□ 0.41
HMBOX1-209ENST00000522468 TEKT1Q969V4 418 aa17.62■□□□□ 0.41
HMBOX1-209ENST00000522468 IFIT1P09914 478 aaKnown RBP17.61■□□□□ 0.41
HMBOX1-209ENST00000522468 TNNI2P48788 182 aa17.61■□□□□ 0.41
HMBOX1-209ENST00000522468 FKBP1CQ5VVH2 108 aa17.61■□□□□ 0.41
HMBOX1-209ENST00000522468 HHIPL2Q6UWX4 724 aa17.61■□□□□ 0.41
HMBOX1-209ENST00000522468 MIER1Q8N108 512 aa17.61■□□□□ 0.41
HMBOX1-209ENST00000522468 CNKSR2Q8WXI2 1034 aa17.61■□□□□ 0.41
HMBOX1-209ENST00000522468 OPTNQ96CV9 577 aa17.61■□□□□ 0.41
HMBOX1-209ENST00000522468 ELP3Q9H9T3 547 aa17.61■□□□□ 0.41
HMBOX1-209ENST00000522468 FBXO3Q9UK99 471 aa17.61■□□□□ 0.41
HMBOX1-209ENST00000522468 FRAT2O75474 233 aaPredicted RBP17.6■□□□□ 0.41
HMBOX1-209ENST00000522468 CIAO1O76071 339 aa17.6■□□□□ 0.41
HMBOX1-209ENST00000522468 CACNB3P54284 484 aa17.6■□□□□ 0.41
HMBOX1-209ENST00000522468 CRHR2Q13324 411 aa17.6■□□□□ 0.41
HMBOX1-209ENST00000522468 VGLL4Q14135 290 aa17.6■□□□□ 0.41
HMBOX1-209ENST00000522468 FAM83AQ86UY5 434 aa17.6■□□□□ 0.41
HMBOX1-209ENST00000522468 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.6■□□□□ 0.41
HMBOX1-209ENST00000522468 NOB1Q9ULX3 412 aaKnown RBP17.6■□□□□ 0.41
HMBOX1-209ENST00000522468 RPAP1Q9BWH6 1393 aaPredicted RBP17.6■□□□□ 0.41
HMBOX1-209ENST00000522468 RBBP6Q7Z6E9 1792 aaKnown RBP17.59■□□□□ 0.41
HMBOX1-209ENST00000522468 MAST3O60307 1309 aa17.59■□□□□ 0.41
HMBOX1-209ENST00000522468 ZBTB22O15209 634 aa17.59■□□□□ 0.41
HMBOX1-209ENST00000522468 UBTFL1P0CB47 393 aaPredicted RBP17.59■□□□□ 0.41
HMBOX1-209ENST00000522468 SLC5A1P13866 664 aa17.59■□□□□ 0.41
HMBOX1-209ENST00000522468 MAP3K9P80192 1104 aa17.59■□□□□ 0.41
HMBOX1-209ENST00000522468 CAP1Q01518 475 aa17.59■□□□□ 0.41
HMBOX1-209ENST00000522468 OTOP1Q7RTM1 612 aa17.58■□□□□ 0.4
HMBOX1-209ENST00000522468 WDR66Q8TBY9 1149 aa17.58■□□□□ 0.4
HMBOX1-209ENST00000522468 BRI3BPQ8WY22 251 aa17.58■□□□□ 0.4
HMBOX1-209ENST00000522468 CCER2I3L3R5 266 aa17.57■□□□□ 0.4
HMBOX1-209ENST00000522468 OTUD7BQ6GQQ9 843 aa17.57■□□□□ 0.4
HMBOX1-209ENST00000522468 API5Q9BZZ5 524 aaKnown RBP17.57■□□□□ 0.4
HMBOX1-209ENST00000522468 LRRFIP2Q9Y608 721 aaKnown RBP17.57■□□□□ 0.4
HMBOX1-209ENST00000522468 SNCAIPQ9Y6H5 919 aa17.57■□□□□ 0.4
HMBOX1-209ENST00000522468 SPDYE5A6NIY4 337 aa17.56■□□□□ 0.4
HMBOX1-209ENST00000522468 SLC34A2O95436 690 aa17.56■□□□□ 0.4
HMBOX1-209ENST00000522468 RARSP54136 660 aaKnown RBP17.56■□□□□ 0.4
HMBOX1-209ENST00000522468 ATP2B3Q16720 1220 aa17.56■□□□□ 0.4
HMBOX1-209ENST00000522468 MEIS3Q99687 375 aa17.56■□□□□ 0.4
HMBOX1-209ENST00000522468 SIL1Q9H173 461 aa17.56■□□□□ 0.4
HMBOX1-209ENST00000522468 COPRSQ9NQ92 184 aa17.56■□□□□ 0.4
HMBOX1-209ENST00000522468 TRIM17Q9Y577 477 aa17.56■□□□□ 0.4
HMBOX1-209ENST00000522468 KIAA0100Q14667 2235 aaKnown RBP17.56■□□□□ 0.4
HMBOX1-209ENST00000522468 MYH2Q9UKX2 1941 aa17.55■□□□□ 0.4
HMBOX1-209ENST00000522468 SALL1Q9NSC2 1324 aa17.55■□□□□ 0.4
HMBOX1-209ENST00000522468 IL15P40933 162 aaPredicted RBP17.55■□□□□ 0.4
HMBOX1-209ENST00000522468 GTF2A2P52657 109 aa17.55■□□□□ 0.4
HMBOX1-209ENST00000522468 PA2G4Q9UQ80 394 aaKnown RBP17.55■□□□□ 0.4
HMBOX1-209ENST00000522468 DAGLAQ9Y4D2 1042 aa17.55■□□□□ 0.4
HMBOX1-209ENST00000522468 CCL15-CCL14A0A0B4J2E2 113 aa17.54■□□□□ 0.4
HMBOX1-209ENST00000522468 PRDX5P30044 214 aa17.54■□□□□ 0.4
HMBOX1-209ENST00000522468 DIXDC1Q155Q3 683 aa17.54■□□□□ 0.4
HMBOX1-209ENST00000522468 CCL15Q16663 113 aa17.54■□□□□ 0.4
HMBOX1-209ENST00000522468 INTS3Q68E01 1043 aaKnown RBP17.54■□□□□ 0.4
HMBOX1-209ENST00000522468 FAM43AQ8N2R8 423 aa17.54■□□□□ 0.4
HMBOX1-209ENST00000522468 CD99L2Q8TCZ2 262 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms