RNA–Protein interactions for RNA: ENST00000521327.1

SPARC-203, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 864 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-203ENST00000521327 MAP3K9P80192 1104 aa17.16■□□□□ 0.34
SPARC-203ENST00000521327 WDR63Q8IWG1 891 aa17.16■□□□□ 0.34
SPARC-203ENST00000521327 TMEM106CQ9BVX2 250 aa17.16■□□□□ 0.34
SPARC-203ENST00000521327 PUS3Q9BZE2 481 aaKnown RBP17.16■□□□□ 0.34
SPARC-203ENST00000521327 CCL15-CCL14A0A0B4J2E2 113 aa17.15■□□□□ 0.34
SPARC-203ENST00000521327 CRKP46108 304 aa17.15■□□□□ 0.34
SPARC-203ENST00000521327 GTF2A2P52657 109 aa17.15■□□□□ 0.34
SPARC-203ENST00000521327 VGLL4Q14135 290 aa17.15■□□□□ 0.34
SPARC-203ENST00000521327 TAF1CQ15572 869 aaPredicted RBP17.15■□□□□ 0.34
SPARC-203ENST00000521327 CCL15Q16663 113 aa17.15■□□□□ 0.34
SPARC-203ENST00000521327 SLC4A10Q6U841 1118 aa17.15■□□□□ 0.34
SPARC-203ENST00000521327 ZFYVE28Q9HCC9 887 aa17.15■□□□□ 0.34
SPARC-203ENST00000521327 TNNI2P48788 182 aa17.14■□□□□ 0.33
SPARC-203ENST00000521327 ARHGEF6Q15052 776 aa17.14■□□□□ 0.33
SPARC-203ENST00000521327 GRIK5Q16478 980 aa17.14■□□□□ 0.33
SPARC-203ENST00000521327 OTUD5Q96G74 571 aa17.14■□□□□ 0.33
SPARC-203ENST00000521327 IQSEC3Q9UPP2 1182 aaPredicted RBP17.14■□□□□ 0.33
SPARC-203ENST00000521327 CSADQ9Y600 493 aa17.14■□□□□ 0.33
SPARC-203ENST00000521327 ALDH1L1O75891 902 aa17.13■□□□□ 0.33
SPARC-203ENST00000521327 VPS37DQ86XT2 251 aa17.13■□□□□ 0.33
SPARC-203ENST00000521327 FAM43AQ8N2R8 423 aa17.13■□□□□ 0.33
SPARC-203ENST00000521327 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.13■□□□□ 0.33
SPARC-203ENST00000521327 SUCLG2Q96I99 432 aa17.13■□□□□ 0.33
SPARC-203ENST00000521327 ZNF333Q96JL9 665 aa17.13■□□□□ 0.33
SPARC-203ENST00000521327 SRCIN1Q9C0H9 1055 aa17.13■□□□□ 0.33
SPARC-203ENST00000521327 SPINK5Q9NQ38 1064 aaPredicted RBP17.13■□□□□ 0.33
SPARC-203ENST00000521327 PTCH2Q9Y6C5 1203 aa17.13■□□□□ 0.33
SPARC-203ENST00000521327 BRCA2P51587 3418 aa17.13■□□□□ 0.33
SPARC-203ENST00000521327 CACNB3P54284 484 aa17.12■□□□□ 0.33
SPARC-203ENST00000521327 CHAF1AQ13111 956 aaPredicted RBP17.12■□□□□ 0.33
SPARC-203ENST00000521327 SLC9C1Q4G0N8 1177 aa17.12■□□□□ 0.33
SPARC-203ENST00000521327 FBXO33Q7Z6M2 555 aa17.12■□□□□ 0.33
SPARC-203ENST00000521327 NBPF11Q86T75 865 aa17.12■□□□□ 0.33
SPARC-203ENST00000521327 MRS2Q9HD23 443 aa17.12■□□□□ 0.33
SPARC-203ENST00000521327 RIPOR2Q9Y4F9 1068 aa17.12■□□□□ 0.33
SPARC-203ENST00000521327 FRAT2O75474 233 aaPredicted RBP17.11■□□□□ 0.33
SPARC-203ENST00000521327 MYCP01106 439 aaPredicted RBP17.11■□□□□ 0.33
SPARC-203ENST00000521327 SLC4A8Q2Y0W8 1093 aa17.11■□□□□ 0.33
SPARC-203ENST00000521327 KAZALD1Q96I82 304 aa17.11■□□□□ 0.33
SPARC-203ENST00000521327 MROH5Q6ZUA9 1318 aa17.11■□□□□ 0.33
SPARC-203ENST00000521327 KIAA0100Q14667 2235 aaKnown RBP17.11■□□□□ 0.33
SPARC-203ENST00000521327 WDHD1O75717 1129 aaPredicted RBP17.1■□□□□ 0.33
SPARC-203ENST00000521327 NBPF7P0C2Y1 421 aaPredicted RBP17.1■□□□□ 0.33
SPARC-203ENST00000521327 SPDYE5A6NIY4 337 aa17.09■□□□□ 0.33
SPARC-203ENST00000521327 CETPP11597 493 aa17.09■□□□□ 0.33
SPARC-203ENST00000521327 HDLBPQ00341 1268 aaKnown RBP17.09■□□□□ 0.33
SPARC-203ENST00000521327 CAVIN4Q5BKX8 364 aa17.09■□□□□ 0.33
SPARC-203ENST00000521327 ERO1BQ86YB8 467 aa17.09■□□□□ 0.33
SPARC-203ENST00000521327 TBC1D22AQ8WUA7 517 aa17.09■□□□□ 0.33
SPARC-203ENST00000521327 ZKSCAN4Q969J2 545 aaPredicted RBP17.09■□□□□ 0.33
SPARC-203ENST00000521327 TEKT1Q969V4 418 aa17.09■□□□□ 0.33
SPARC-203ENST00000521327 ARHGAP39Q9C0H5 1083 aa17.09■□□□□ 0.33
SPARC-203ENST00000521327 TLR2O60603 784 aa17.08■□□□□ 0.32
SPARC-203ENST00000521327 LRRC24Q50LG9 513 aa17.08■□□□□ 0.32
SPARC-203ENST00000521327 METTL24Q5JXM2 366 aa17.08■□□□□ 0.32
SPARC-203ENST00000521327 WRNIP1Q96S55 665 aa17.08■□□□□ 0.32
SPARC-203ENST00000521327 SNCAIPQ9Y6H5 919 aa17.08■□□□□ 0.32
SPARC-203ENST00000521327 BTBD19C9JJ37 291 aa17.07■□□□□ 0.32
SPARC-203ENST00000521327 IRF6O14896 467 aa17.07■□□□□ 0.32
SPARC-203ENST00000521327 BCAMP50895 628 aa17.07■□□□□ 0.32
SPARC-203ENST00000521327 SNAPC2Q13487 334 aa17.07■□□□□ 0.32
SPARC-203ENST00000521327 KIF22Q14807 665 aa17.07■□□□□ 0.32
SPARC-203ENST00000521327 APOBEC3HQ6NTF7 200 aaKnown RBP17.07■□□□□ 0.32
SPARC-203ENST00000521327 SH3TC2Q8TF17 1288 aa17.07■□□□□ 0.32
SPARC-203ENST00000521327 BICC1Q9H694 974 aaKnown RBP17.07■□□□□ 0.32
SPARC-203ENST00000521327 TMOD2Q9NZR1 351 aa17.07■□□□□ 0.32
SPARC-203ENST00000521327 ECM2O94769 699 aaPredicted RBP17.06■□□□□ 0.32
SPARC-203ENST00000521327 FXR1P51114 621 aaKnown RBP eCLIP17.06■□□□□ 0.32
SPARC-203ENST00000521327 LACTBP83111 547 aaPredicted RBP17.06■□□□□ 0.32
SPARC-203ENST00000521327 FAM83AQ86UY5 434 aa17.06■□□□□ 0.32
SPARC-203ENST00000521327 ZDHHC15Q96MV8 337 aa17.06■□□□□ 0.32
SPARC-203ENST00000521327 MRIQ9BWK5 157 aa17.06■□□□□ 0.32
SPARC-203ENST00000521327 COLQQ9Y215 455 aaPredicted RBP17.06■□□□□ 0.32
SPARC-203ENST00000521327 UTYO14607 1347 aa17.05■□□□□ 0.32
SPARC-203ENST00000521327 PDE8BO95263 885 aa17.05■□□□□ 0.32
SPARC-203ENST00000521327 RABL6Q3YEC7 729 aaPredicted RBP17.05■□□□□ 0.32
SPARC-203ENST00000521327 MIGA2Q7L4E1 593 aa17.05■□□□□ 0.32
SPARC-203ENST00000521327 ANKRD44Q8N8A2 993 aa17.05■□□□□ 0.32
SPARC-203ENST00000521327 HOOK2Q96ED9 719 aa17.05■□□□□ 0.32
SPARC-203ENST00000521327 PPIL2Q13356 520 aa17.04■□□□□ 0.32
SPARC-203ENST00000521327 FKBP1CQ5VVH2 108 aa17.04■□□□□ 0.32
SPARC-203ENST00000521327 VGLL2Q8N8G2 317 aa17.04■□□□□ 0.32
SPARC-203ENST00000521327 KLHDC4Q8TBB5 520 aa17.04■□□□□ 0.32
SPARC-203ENST00000521327 ZCCHC17Q9NP64 241 aaKnown RBP17.04■□□□□ 0.32
SPARC-203ENST00000521327 GNRH1P01148 92 aa17.03■□□□□ 0.32
SPARC-203ENST00000521327 DCAF15Q66K64 600 aa17.03■□□□□ 0.32
SPARC-203ENST00000521327 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.03■□□□□ 0.32
SPARC-203ENST00000521327 CPA4Q9UI42 421 aa17.03■□□□□ 0.32
SPARC-203ENST00000521327 SUGT1Q9Y2Z0 365 aa17.03■□□□□ 0.32
SPARC-203ENST00000521327 ECM29Q5VYK3 1845 aa17.03■□□□□ 0.32
SPARC-203ENST00000521327 H0YGN5 161 aa17.02■□□□□ 0.32
SPARC-203ENST00000521327 INPP5BP32019 993 aa17.02■□□□□ 0.32
SPARC-203ENST00000521327 PPATQ06203 517 aa17.02■□□□□ 0.32
SPARC-203ENST00000521327 HHIPL2Q6UWX4 724 aa17.02■□□□□ 0.32
SPARC-203ENST00000521327 C17orf99Q6UX52 265 aa17.02■□□□□ 0.32
SPARC-203ENST00000521327 ZNF341Q9BYN7 854 aa17.02■□□□□ 0.32
SPARC-203ENST00000521327 MAST3O60307 1309 aa17.01■□□□□ 0.31
SPARC-203ENST00000521327 IFIT1P09914 478 aaKnown RBP17.01■□□□□ 0.31
SPARC-203ENST00000521327 PSMC4P43686 418 aa17.01■□□□□ 0.31
SPARC-203ENST00000521327 PRMT2P55345 433 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms