RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 SIRT2Q8IXJ6 389 aa25.46■■□□□ 1.67
TRIM35-203ENST00000521253 C2orf69Q8N8R5 385 aa25.46■■□□□ 1.67
TRIM35-203ENST00000521253 EXOC6BQ9Y2D4 811 aa25.46■■□□□ 1.67
TRIM35-203ENST00000521253 FPGT-TNNI3KV9GXZ4 949 aa25.46■■□□□ 1.67
TRIM35-203ENST00000521253 HUNKP57058 714 aa25.45■■□□□ 1.66
TRIM35-203ENST00000521253 GORABQ5T7V8 394 aa25.45■■□□□ 1.66
TRIM35-203ENST00000521253 CYP4F22Q6NT55 531 aa25.45■■□□□ 1.66
TRIM35-203ENST00000521253 TEKT1Q969V4 418 aa25.45■■□□□ 1.66
TRIM35-203ENST00000521253 HHIPL1Q96JK4 782 aa25.45■■□□□ 1.66
TRIM35-203ENST00000521253 VEZTQ9HBM0 779 aa25.45■■□□□ 1.66
TRIM35-203ENST00000521253 MAST3O60307 1309 aa25.44■■□□□ 1.66
TRIM35-203ENST00000521253 WDR33Q9C0J8 1336 aaKnown RBP25.44■■□□□ 1.66
TRIM35-203ENST00000521253 SALL1Q9NSC2 1324 aa25.44■■□□□ 1.66
TRIM35-203ENST00000521253 CAPNS2Q96L46 248 aa25.44■■□□□ 1.66
TRIM35-203ENST00000521253 MRIQ9BWK5 157 aa25.44■■□□□ 1.66
TRIM35-203ENST00000521253 DEFB129Q9H1M3 183 aa25.44■■□□□ 1.66
TRIM35-203ENST00000521253 TDRD3Q9H7E2 651 aaKnown RBP25.44■■□□□ 1.66
TRIM35-203ENST00000521253 PDS5AQ29RF7 1337 aaKnown RBP25.43■■□□□ 1.66
TRIM35-203ENST00000521253 PRDX5P30044 214 aa25.43■■□□□ 1.66
TRIM35-203ENST00000521253 RRP1P56182 461 aaKnown RBP25.43■■□□□ 1.66
TRIM35-203ENST00000521253 SPDYE2Q495Y8 402 aa25.43■■□□□ 1.66
TRIM35-203ENST00000521253 ZNF70Q9UC06 446 aaPredicted RBP25.43■■□□□ 1.66
TRIM35-203ENST00000521253 HMMRO75330 724 aa25.42■■□□□ 1.66
TRIM35-203ENST00000521253 ECE1P42892 770 aa25.42■■□□□ 1.66
TRIM35-203ENST00000521253 GRM1Q13255 1194 aa25.42■■□□□ 1.66
TRIM35-203ENST00000521253 ZDHHC15Q96MV8 337 aa25.42■■□□□ 1.66
TRIM35-203ENST00000521253 MYH13Q9UKX3 1938 aa25.41■■□□□ 1.66
TRIM35-203ENST00000521253 LDHBP07195 334 aaKnown RBP25.41■■□□□ 1.66
TRIM35-203ENST00000521253 ARID4AP29374 1257 aaPredicted RBP25.41■■□□□ 1.66
TRIM35-203ENST00000521253 DBNDD2Q9BQY9 259 aa25.41■■□□□ 1.66
TRIM35-203ENST00000521253 HMG20BQ9P0W2 317 aa25.41■■□□□ 1.66
TRIM35-203ENST00000521253 APOBEC3HQ6NTF7 200 aaKnown RBP25.4■■□□□ 1.66
TRIM35-203ENST00000521253 HHIPL2Q6UWX4 724 aa25.4■■□□□ 1.66
TRIM35-203ENST00000521253 PI16Q6UXB8 463 aa25.4■■□□□ 1.66
TRIM35-203ENST00000521253 ERC1Q8IUD2 1116 aa25.4■■□□□ 1.66
TRIM35-203ENST00000521253 ZGPATQ8N5A5 531 aaKnown RBP25.4■■□□□ 1.66
TRIM35-203ENST00000521253 PPP2R3BQ9Y5P8 575 aa25.4■■□□□ 1.66
TRIM35-203ENST00000521253 NF2P35240 595 aa25.39■■□□□ 1.66
TRIM35-203ENST00000521253 FKBP1BP68106 108 aa25.39■■□□□ 1.66
TRIM35-203ENST00000521253 DIXDC1Q155Q3 683 aa25.39■■□□□ 1.66
TRIM35-203ENST00000521253 HSP90AB4PQ58FF6 505 aa25.39■■□□□ 1.66
TRIM35-203ENST00000521253 MOB2Q70IA6 237 aa25.39■■□□□ 1.66
TRIM35-203ENST00000521253 SPATA5Q8NB90 893 aa25.39■■□□□ 1.66
TRIM35-203ENST00000521253 EAF2Q96CJ1 260 aaPredicted RBP25.39■■□□□ 1.66
TRIM35-203ENST00000521253 UQCRFS1P1P0C7P4 283 aa25.38■■□□□ 1.65
TRIM35-203ENST00000521253 RASA3Q14644 834 aa25.38■■□□□ 1.65
TRIM35-203ENST00000521253 CCDC8Q9H0W5 538 aaPredicted RBP25.38■■□□□ 1.65
TRIM35-203ENST00000521253 TLR7Q9NYK1 1049 aaKnown RBP25.38■■□□□ 1.65
TRIM35-203ENST00000521253 ABCF2Q9UG63 623 aa25.38■■□□□ 1.65
TRIM35-203ENST00000521253 DBNLQ9UJU6 430 aaKnown RBP25.38■■□□□ 1.65
TRIM35-203ENST00000521253 ECM29Q5VYK3 1845 aa25.37■■□□□ 1.65
TRIM35-203ENST00000521253 MCAMP43121 646 aa25.37■■□□□ 1.65
TRIM35-203ENST00000521253 TNFAIP1Q13829 316 aa25.37■■□□□ 1.65
TRIM35-203ENST00000521253 CCDC158Q5M9N0 1113 aa25.37■■□□□ 1.65
TRIM35-203ENST00000521253 RGMBQ6NW40 437 aa25.37■■□□□ 1.65
TRIM35-203ENST00000521253 DAGLAQ9Y4D2 1042 aa25.37■■□□□ 1.65
TRIM35-203ENST00000521253 PAPPA2Q9BXP8 1791 aa25.36■■□□□ 1.65
TRIM35-203ENST00000521253 TCP10L2B9ZVM9 353 aa25.36■■□□□ 1.65
TRIM35-203ENST00000521253 AOC2O75106 756 aa25.36■■□□□ 1.65
TRIM35-203ENST00000521253 HSPA1AP0DMV8 641 aaKnown RBP25.36■■□□□ 1.65
TRIM35-203ENST00000521253 HSPA1BP0DMV9 641 aaKnown RBP25.36■■□□□ 1.65
TRIM35-203ENST00000521253 TTC39AQ5SRH9 613 aa25.36■■□□□ 1.65
TRIM35-203ENST00000521253 RHPN1Q8TCX5 695 aa25.36■■□□□ 1.65
TRIM35-203ENST00000521253 APBB1O00213 710 aa25.35■■□□□ 1.65
TRIM35-203ENST00000521253 CACNB3P54284 484 aa25.35■■□□□ 1.65
TRIM35-203ENST00000521253 TTLL12Q14166 644 aaPredicted RBP25.35■■□□□ 1.65
TRIM35-203ENST00000521253 SPTY2D1Q68D10 685 aaPredicted RBP25.35■■□□□ 1.65
TRIM35-203ENST00000521253 IL1RAPL2Q9NP60 686 aa25.35■■□□□ 1.65
TRIM35-203ENST00000521253 UBE2Q2LH0YL09 131 aa25.34■■□□□ 1.65
TRIM35-203ENST00000521253 ZNF157P51786 506 aaPredicted RBP25.34■■□□□ 1.65
TRIM35-203ENST00000521253 PRKG1Q13976 671 aa25.34■■□□□ 1.65
TRIM35-203ENST00000521253 NBPF12Q5TAG4 269 aaPredicted RBP25.34■■□□□ 1.65
TRIM35-203ENST00000521253 TBC1D9Q6ZT07 1266 aa25.34■■□□□ 1.65
TRIM35-203ENST00000521253 AACSQ86V21 672 aa25.34■■□□□ 1.65
TRIM35-203ENST00000521253 DZIP1Q86YF9 867 aaKnown RBP25.34■■□□□ 1.65
TRIM35-203ENST00000521253 SSC5DA1L4H1 1573 aa25.34■■□□□ 1.65
TRIM35-203ENST00000521253 ERICH6Q7L0X2 663 aa25.33■■□□□ 1.65
TRIM35-203ENST00000521253 KIF1BPQ96EK5 621 aa25.33■■□□□ 1.65
TRIM35-203ENST00000521253 ZNF512BQ96KM6 892 aaPredicted RBP25.33■■□□□ 1.65
TRIM35-203ENST00000521253 SNRKQ9NRH2 765 aa25.33■■□□□ 1.65
TRIM35-203ENST00000521253 TMOD2Q9NZR1 351 aa25.33■■□□□ 1.65
TRIM35-203ENST00000521253 FZD1Q9UP38 647 aa25.33■■□□□ 1.65
TRIM35-203ENST00000521253 FAM155AB1AL88 458 aaPredicted RBP25.32■■□□□ 1.64
TRIM35-203ENST00000521253 MAP2K2P36507 400 aa25.32■■□□□ 1.64
TRIM35-203ENST00000521253 TNNI2P48788 182 aa25.32■■□□□ 1.64
TRIM35-203ENST00000521253 SUPT20HL1Q3ZLR7 823 aa25.32■■□□□ 1.64
TRIM35-203ENST00000521253 CDAN1Q8IWY9 1227 aa25.32■■□□□ 1.64
TRIM35-203ENST00000521253 CCDC102AQ96A19 550 aa25.32■■□□□ 1.64
TRIM35-203ENST00000521253 TEPSINQ96N21 525 aa25.32■■□□□ 1.64
TRIM35-203ENST00000521253 TMEM39BQ9GZU3 492 aa25.32■■□□□ 1.64
TRIM35-203ENST00000521253 THSD7BQ9C0I4 1608 aa25.32■■□□□ 1.64
TRIM35-203ENST00000521253 RAB11FIP3O75154 756 aa25.31■■□□□ 1.64
TRIM35-203ENST00000521253 MECOMQ03112 1051 aa25.31■■□□□ 1.64
TRIM35-203ENST00000521253 NOGQ13253 232 aa25.31■■□□□ 1.64
TRIM35-203ENST00000521253 FKBP1CQ5VVH2 108 aa25.31■■□□□ 1.64
TRIM35-203ENST00000521253 CDC42EP5Q6NZY7 148 aa25.31■■□□□ 1.64
TRIM35-203ENST00000521253 ARMC9Q7Z3E5 817 aa25.31■■□□□ 1.64
TRIM35-203ENST00000521253 WBP1LQ9NX94 342 aa25.31■■□□□ 1.64
TRIM35-203ENST00000521253 ANGEL1Q9UNK9 670 aaKnown RBP25.31■■□□□ 1.64
TRIM35-203ENST00000521253 GAKO14976 1311 aa25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms