RNA–Protein interactions for RNA: ENST00000521127.1

SNHG6-204, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 2

Gene SNHG6, Length 560 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-204ENST00000521127 HIBADHP31937 336 aaKnown RBP23.59■■□□□ 1.37
SNHG6-204ENST00000521127 TNFAIP1Q13829 316 aa23.59■■□□□ 1.37
SNHG6-204ENST00000521127 GRIK5Q16478 980 aa23.59■■□□□ 1.37
SNHG6-204ENST00000521127 DZIP1LQ8IYY4 767 aaKnown RBP23.59■■□□□ 1.37
SNHG6-204ENST00000521127 BRI3BPQ8WY22 251 aa23.59■■□□□ 1.37
SNHG6-204ENST00000521127 RBBP6Q7Z6E9 1792 aaKnown RBP23.59■■□□□ 1.37
SNHG6-204ENST00000521127 EN2P19622 333 aaPredicted RBP23.58■■□□□ 1.37
SNHG6-204ENST00000521127 GCC1Q96CN9 775 aa23.58■■□□□ 1.37
SNHG6-204ENST00000521127 KAZALD1Q96I82 304 aa23.58■■□□□ 1.37
SNHG6-204ENST00000521127 TMEM39BQ9GZU3 492 aa23.58■■□□□ 1.37
SNHG6-204ENST00000521127 C9orf78Q9NZ63 289 aaPredicted RBP23.58■■□□□ 1.37
SNHG6-204ENST00000521127 TCP10L2B9ZVM9 353 aa23.57■■□□□ 1.36
SNHG6-204ENST00000521127 SUCLG2Q96I99 432 aa23.57■■□□□ 1.36
SNHG6-204ENST00000521127 ALDH1L1O75891 902 aa23.56■■□□□ 1.36
SNHG6-204ENST00000521127 CRKP46108 304 aa23.56■■□□□ 1.36
SNHG6-204ENST00000521127 HABP4Q5JVS0 413 aaKnown RBP23.56■■□□□ 1.36
SNHG6-204ENST00000521127 MAP3K9P80192 1104 aa23.55■■□□□ 1.36
SNHG6-204ENST00000521127 VGLL4Q14135 290 aa23.55■■□□□ 1.36
SNHG6-204ENST00000521127 RIPOR2Q9Y4F9 1068 aa23.55■■□□□ 1.36
SNHG6-204ENST00000521127 ARAP2Q8WZ64 1704 aa23.55■■□□□ 1.36
SNHG6-204ENST00000521127 CCL15-CCL14A0A0B4J2E2 113 aa23.54■■□□□ 1.36
SNHG6-204ENST00000521127 TAF1CQ15572 869 aaPredicted RBP23.54■■□□□ 1.36
SNHG6-204ENST00000521127 CCL15Q16663 113 aa23.54■■□□□ 1.36
SNHG6-204ENST00000521127 FBXO33Q7Z6M2 555 aa23.54■■□□□ 1.36
SNHG6-204ENST00000521127 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.54■■□□□ 1.36
SNHG6-204ENST00000521127 MRS2Q9HD23 443 aa23.54■■□□□ 1.36
SNHG6-204ENST00000521127 IQSEC3Q9UPP2 1182 aaPredicted RBP23.54■■□□□ 1.36
SNHG6-204ENST00000521127 SLC4A10Q6U841 1118 aa23.53■■□□□ 1.36
SNHG6-204ENST00000521127 FAM43AQ8N2R8 423 aa23.53■■□□□ 1.36
SNHG6-204ENST00000521127 ZNF333Q96JL9 665 aa23.53■■□□□ 1.36
SNHG6-204ENST00000521127 SRCIN1Q9C0H9 1055 aa23.53■■□□□ 1.36
SNHG6-204ENST00000521127 CEP290O15078 2479 aa23.53■■□□□ 1.36
SNHG6-204ENST00000521127 GTF2A2P52657 109 aa23.52■■□□□ 1.36
SNHG6-204ENST00000521127 ZFYVE28Q9HCC9 887 aa23.52■■□□□ 1.36
SNHG6-204ENST00000521127 PTCH2Q9Y6C5 1203 aa23.52■■□□□ 1.36
SNHG6-204ENST00000521127 NBPF7P0C2Y1 421 aaPredicted RBP23.51■■□□□ 1.35
SNHG6-204ENST00000521127 TNNI2P48788 182 aa23.51■■□□□ 1.35
SNHG6-204ENST00000521127 CACNB3P54284 484 aa23.51■■□□□ 1.35
SNHG6-204ENST00000521127 CHAF1AQ13111 956 aaPredicted RBP23.51■■□□□ 1.35
SNHG6-204ENST00000521127 OTUD5Q96G74 571 aa23.51■■□□□ 1.35
SNHG6-204ENST00000521127 LRRC24Q50LG9 513 aa23.5■■□□□ 1.35
SNHG6-204ENST00000521127 CSADQ9Y600 493 aa23.5■■□□□ 1.35
SNHG6-204ENST00000521127 MROH5Q6ZUA9 1318 aa23.5■■□□□ 1.35
SNHG6-204ENST00000521127 BRCA2P51587 3418 aa23.5■■□□□ 1.35
SNHG6-204ENST00000521127 SPDYE5A6NIY4 337 aa23.49■■□□□ 1.35
SNHG6-204ENST00000521127 HDLBPQ00341 1268 aaKnown RBP23.49■■□□□ 1.35
SNHG6-204ENST00000521127 TMEM106CQ9BVX2 250 aa23.49■■□□□ 1.35
SNHG6-204ENST00000521127 SNCAIPQ9Y6H5 919 aa23.49■■□□□ 1.35
SNHG6-204ENST00000521127 UTYO14607 1347 aa23.49■■□□□ 1.35
SNHG6-204ENST00000521127 VPS37DQ86XT2 251 aa23.48■■□□□ 1.35
SNHG6-204ENST00000521127 BICC1Q9H694 974 aaKnown RBP23.48■■□□□ 1.35
SNHG6-204ENST00000521127 ARHGEF6Q15052 776 aa23.47■■□□□ 1.35
SNHG6-204ENST00000521127 RABL6Q3YEC7 729 aaPredicted RBP23.47■■□□□ 1.35
SNHG6-204ENST00000521127 SLC9C1Q4G0N8 1177 aa23.47■■□□□ 1.35
SNHG6-204ENST00000521127 ANKRD44Q8N8A2 993 aa23.47■■□□□ 1.35
SNHG6-204ENST00000521127 VGLL2Q8N8G2 317 aa23.47■■□□□ 1.35
SNHG6-204ENST00000521127 TBC1D22AQ8WUA7 517 aa23.47■■□□□ 1.35
SNHG6-204ENST00000521127 ARHGAP39Q9C0H5 1083 aa23.47■■□□□ 1.35
SNHG6-204ENST00000521127 ZSWIM8A7E2V4 1837 aa23.47■■□□□ 1.35
SNHG6-204ENST00000521127 METTL24Q5JXM2 366 aa23.46■■□□□ 1.35
SNHG6-204ENST00000521127 ERO1BQ86YB8 467 aa23.46■■□□□ 1.35
SNHG6-204ENST00000521127 ZKSCAN4Q969J2 545 aaPredicted RBP23.46■■□□□ 1.35
SNHG6-204ENST00000521127 TEKT1Q969V4 418 aa23.46■■□□□ 1.35
SNHG6-204ENST00000521127 ZDHHC15Q96MV8 337 aa23.46■■□□□ 1.35
SNHG6-204ENST00000521127 BTBD19C9JJ37 291 aa23.45■■□□□ 1.34
SNHG6-204ENST00000521127 TLR2O60603 784 aa23.45■■□□□ 1.34
SNHG6-204ENST00000521127 CETPP11597 493 aa23.45■■□□□ 1.34
SNHG6-204ENST00000521127 BCAMP50895 628 aa23.45■■□□□ 1.34
SNHG6-204ENST00000521127 APOBEC3HQ6NTF7 200 aaKnown RBP23.45■■□□□ 1.34
SNHG6-204ENST00000521127 NBPF11Q86T75 865 aa23.45■■□□□ 1.34
SNHG6-204ENST00000521127 WRNIP1Q96S55 665 aa23.45■■□□□ 1.34
SNHG6-204ENST00000521127 MRIQ9BWK5 157 aa23.45■■□□□ 1.34
SNHG6-204ENST00000521127 IRF6O14896 467 aa23.44■■□□□ 1.34
SNHG6-204ENST00000521127 FRAT2O75474 233 aaPredicted RBP23.44■■□□□ 1.34
SNHG6-204ENST00000521127 PDE8BO95263 885 aa23.44■■□□□ 1.34
SNHG6-204ENST00000521127 CAVIN4Q5BKX8 364 aa23.44■■□□□ 1.34
SNHG6-204ENST00000521127 FAM83AQ86UY5 434 aa23.44■■□□□ 1.34
SNHG6-204ENST00000521127 MYCP01106 439 aaPredicted RBP23.43■■□□□ 1.34
SNHG6-204ENST00000521127 SLC4A8Q2Y0W8 1093 aa23.43■■□□□ 1.34
SNHG6-204ENST00000521127 FKBP1CQ5VVH2 108 aa23.43■■□□□ 1.34
SNHG6-204ENST00000521127 KLHDC4Q8TBB5 520 aa23.43■■□□□ 1.34
SNHG6-204ENST00000521127 SH3TC2Q8TF17 1288 aa23.43■■□□□ 1.34
SNHG6-204ENST00000521127 TRIOBPQ9H2D6 2365 aa23.43■■□□□ 1.34
SNHG6-204ENST00000521127 LACTBP83111 547 aaPredicted RBP23.42■■□□□ 1.34
SNHG6-204ENST00000521127 PPIL2Q13356 520 aa23.42■■□□□ 1.34
SNHG6-204ENST00000521127 SNAPC2Q13487 334 aa23.42■■□□□ 1.34
SNHG6-204ENST00000521127 ZCCHC17Q9NP64 241 aaKnown RBP23.42■■□□□ 1.34
SNHG6-204ENST00000521127 FXR1P51114 621 aaKnown RBP eCLIP23.41■■□□□ 1.34
SNHG6-204ENST00000521127 TMOD2Q9NZR1 351 aa23.41■■□□□ 1.34
SNHG6-204ENST00000521127 FGFR2P21802 821 aa23.4■■□□□ 1.34
SNHG6-204ENST00000521127 INPP5BP32019 993 aa23.4■■□□□ 1.34
SNHG6-204ENST00000521127 SUGT1Q9Y2Z0 365 aa23.4■■□□□ 1.34
SNHG6-204ENST00000521127 WDHD1O75717 1129 aaPredicted RBP23.39■■□□□ 1.33
SNHG6-204ENST00000521127 CTGFP29279 349 aa23.39■■□□□ 1.33
SNHG6-204ENST00000521127 KIF22Q14807 665 aa23.39■■□□□ 1.33
SNHG6-204ENST00000521127 HHIPL2Q6UWX4 724 aa23.39■■□□□ 1.33
SNHG6-204ENST00000521127 MIGA2Q7L4E1 593 aa23.39■■□□□ 1.33
SNHG6-204ENST00000521127 MRPL50Q8N5N7 158 aaKnown RBP23.39■■□□□ 1.33
SNHG6-204ENST00000521127 COLQQ9Y215 455 aaPredicted RBP23.39■■□□□ 1.33
SNHG6-204ENST00000521127 RPAP1Q9BWH6 1393 aaPredicted RBP23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms