RNA–Protein interactions for RNA: ENST00000520953.5

SREK1-209, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 5

Gene SREK1, Length 2,172 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-209ENST00000520953 DIXDC1Q155Q3 683 aa18.1■□□□□ 0.49
SREK1-209ENST00000520953 TTLL5Q6EMB2 1281 aa18.1■□□□□ 0.49
SREK1-209ENST00000520953 CCDC171Q6TFL3 1326 aa18.1■□□□□ 0.49
SREK1-209ENST00000520953 FAM205AQ6ZU69 1335 aa18.1■□□□□ 0.49
SREK1-209ENST00000520953 ZBTB22O15209 634 aa18.09■□□□□ 0.49
SREK1-209ENST00000520953 LARGE2Q8N3Y3 721 aa18.09■□□□□ 0.49
SREK1-209ENST00000520953 SUPT20HQ8NEM7 779 aa18.09■□□□□ 0.49
SREK1-209ENST00000520953 TAOK3Q9H2K8 898 aa18.09■□□□□ 0.49
SREK1-209ENST00000520953 RAD50Q92878 1312 aa18.09■□□□□ 0.49
SREK1-209ENST00000520953 SALL1Q9NSC2 1324 aa18.09■□□□□ 0.49
SREK1-209ENST00000520953 ARFGEF1Q9Y6D6 1849 aa18.09■□□□□ 0.49
SREK1-209ENST00000520953 GPAA1O43292 621 aa18.08■□□□□ 0.49
SREK1-209ENST00000520953 SLC4A3P48751 1232 aa18.08■□□□□ 0.49
SREK1-209ENST00000520953 KIF2CQ99661 725 aa18.08■□□□□ 0.49
SREK1-209ENST00000520953 ARMT1Q9H993 441 aa18.08■□□□□ 0.49
SREK1-209ENST00000520953 F8W031 263 aaPredicted RBP18.08■□□□□ 0.48
SREK1-209ENST00000520953 MBD4O95243 580 aa18.08■□□□□ 0.48
SREK1-209ENST00000520953 DYNLL1P63167 89 aaKnown RBP18.08■□□□□ 0.48
SREK1-209ENST00000520953 SOGA3Q5TF21 947 aa18.08■□□□□ 0.48
SREK1-209ENST00000520953 ZSCAN25Q6NSZ9 544 aa18.08■□□□□ 0.48
SREK1-209ENST00000520953 TAF6LQ9Y6J9 622 aa18.08■□□□□ 0.48
SREK1-209ENST00000520953 LDHBP07195 334 aaKnown RBP18.07■□□□□ 0.48
SREK1-209ENST00000520953 IARSP41252 1262 aaKnown RBP18.07■□□□□ 0.48
SREK1-209ENST00000520953 NBR1Q14596 966 aa18.07■□□□□ 0.48
SREK1-209ENST00000520953 NAA16Q6N069 864 aaPredicted RBP18.07■□□□□ 0.48
SREK1-209ENST00000520953 KIAA1211Q6ZU35 1233 aa18.07■□□□□ 0.48
SREK1-209ENST00000520953 PODNQ7Z5L7 613 aa18.07■□□□□ 0.48
SREK1-209ENST00000520953 LCORLQ8N3X6 602 aa18.07■□□□□ 0.48
SREK1-209ENST00000520953 RBM25P49756 843 aaKnown RBP18.07■□□□□ 0.48
SREK1-209ENST00000520953 LRRFIP1Q32MZ4 808 aaKnown RBP18.07■□□□□ 0.48
SREK1-209ENST00000520953 MAST2Q6P0Q8 1798 aa18.06■□□□□ 0.48
SREK1-209ENST00000520953 ADAMTSL1Q8N6G6 1762 aa18.06■□□□□ 0.48
SREK1-209ENST00000520953 CCDC88AQ3V6T2 1871 aa18.06■□□□□ 0.48
SREK1-209ENST00000520953 PRKAB2O43741 272 aa18.06■□□□□ 0.48
SREK1-209ENST00000520953 RAD17O75943 681 aa18.06■□□□□ 0.48
SREK1-209ENST00000520953 YBX3P16989 372 aaKnown RBP eCLIP18.06■□□□□ 0.48
SREK1-209ENST00000520953 GRIPAP1Q4V328 841 aa18.06■□□□□ 0.48
SREK1-209ENST00000520953 DZIP1Q86YF9 867 aaKnown RBP18.06■□□□□ 0.48
SREK1-209ENST00000520953 RBM8AQ9Y5S9 174 aaKnown RBP18.06■□□□□ 0.48
SREK1-209ENST00000520953 HSPD1P10809 573 aaKnown RBP18.06■□□□□ 0.48
SREK1-209ENST00000520953 DACT2Q5SW24 774 aa18.06■□□□□ 0.48
SREK1-209ENST00000520953 RASEFQ8IZ41 740 aa18.06■□□□□ 0.48
SREK1-209ENST00000520953 MAP4K1Q92918 833 aa18.06■□□□□ 0.48
SREK1-209ENST00000520953 TICAM2Q86XR7 235 aa18.05■□□□□ 0.48
SREK1-209ENST00000520953 STRBPQ96SI9 672 aaKnown RBP18.05■□□□□ 0.48
SREK1-209ENST00000520953 COL9A3Q14050 684 aaPredicted RBP18.04■□□□□ 0.48
SREK1-209ENST00000520953 ZGPATQ8N5A5 531 aaKnown RBP18.04■□□□□ 0.48
SREK1-209ENST00000520953 AIDAQ96BJ3 306 aa18.04■□□□□ 0.48
SREK1-209ENST00000520953 RIOK1Q9BRS2 568 aaKnown RBP18.04■□□□□ 0.48
SREK1-209ENST00000520953 AATFQ9NY61 560 aaKnown RBP eCLIP18.04■□□□□ 0.48
SREK1-209ENST00000520953 HSPA4P34932 840 aa18.04■□□□□ 0.48
SREK1-209ENST00000520953 SCNN1DP51172 638 aa18.04■□□□□ 0.48
SREK1-209ENST00000520953 SPTY2D1Q68D10 685 aaPredicted RBP18.04■□□□□ 0.48
SREK1-209ENST00000520953 PCDHAC2Q9Y5I4 1007 aa18.04■□□□□ 0.48
SREK1-209ENST00000520953 MYH2Q9UKX2 1941 aa18.04■□□□□ 0.48
SREK1-209ENST00000520953 USP17L3A6NCW0 530 aa18.03■□□□□ 0.48
SREK1-209ENST00000520953 USP17L4A6NCW7 530 aa18.03■□□□□ 0.48
SREK1-209ENST00000520953 ARHGAP27Q6ZUM4 889 aa18.03■□□□□ 0.48
SREK1-209ENST00000520953 USP17L1Q7RTZ2 530 aa18.03■□□□□ 0.48
SREK1-209ENST00000520953 TBC1D22AQ8WUA7 517 aa18.03■□□□□ 0.48
SREK1-209ENST00000520953 NECTIN1Q15223 517 aa18.03■□□□□ 0.48
SREK1-209ENST00000520953 STRIP1Q5VSL9 837 aa18.03■□□□□ 0.48
SREK1-209ENST00000520953 KIAA0825Q8IV33 1275 aa18.03■□□□□ 0.48
SREK1-209ENST00000520953 DAXXQ9UER7 740 aaPredicted RBP18.03■□□□□ 0.48
SREK1-209ENST00000520953 TTF2Q9UNY4 1162 aaKnown RBP18.03■□□□□ 0.48
SREK1-209ENST00000520953 MAGEB6P1A0A0J9YX57 407 aa18.02■□□□□ 0.48
SREK1-209ENST00000520953 PSMD14O00487 310 aa18.02■□□□□ 0.48
SREK1-209ENST00000520953 NIM1KQ8IY84 436 aa18.02■□□□□ 0.48
SREK1-209ENST00000520953 SDR42E1Q8WUS8 393 aa18.02■□□□□ 0.48
SREK1-209ENST00000520953 EPB41L4AQ9HCS5 686 aaPredicted RBP18.02■□□□□ 0.48
SREK1-209ENST00000520953 ZBTB12Q9Y330 459 aaPredicted RBP18.02■□□□□ 0.48
SREK1-209ENST00000520953 CREB3L3Q68CJ9 461 aa18.01■□□□□ 0.47
SREK1-209ENST00000520953 SLC27A2O14975 620 aa18.01■□□□□ 0.47
SREK1-209ENST00000520953 ZNRF3Q9ULT6 936 aa18.01■□□□□ 0.47
SREK1-209ENST00000520953 SNX14Q9Y5W7 946 aa18.01■□□□□ 0.47
SREK1-209ENST00000520953 PSME4Q14997 1843 aa18.01■□□□□ 0.47
SREK1-209ENST00000520953 SMIM22K7EJ46 135 aa18■□□□□ 0.47
SREK1-209ENST00000520953 FGAP02671 866 aa18■□□□□ 0.47
SREK1-209ENST00000520953 DSCC1Q9BVC3 393 aa18■□□□□ 0.47
SREK1-209ENST00000520953 SLC4A4Q9Y6R1 1079 aa18■□□□□ 0.47
SREK1-209ENST00000520953 MROH7-TTC4A0A0A0MT08 1334 aa18■□□□□ 0.47
SREK1-209ENST00000520953 LTBP3Q9NS15 1303 aa18■□□□□ 0.47
SREK1-209ENST00000520953 GSG1L2A8MUP6 293 aa18■□□□□ 0.47
SREK1-209ENST00000520953 APPP05067 770 aa18■□□□□ 0.47
SREK1-209ENST00000520953 CXCL9Q07325 125 aa18■□□□□ 0.47
SREK1-209ENST00000520953 CYP21A2P08686 494 aa17.99■□□□□ 0.47
SREK1-209ENST00000520953 HAND2P61296 217 aa17.99■□□□□ 0.47
SREK1-209ENST00000520953 EVX2Q03828 476 aa17.99■□□□□ 0.47
SREK1-209ENST00000520953 ADCK5Q3MIX3 580 aa17.99■□□□□ 0.47
SREK1-209ENST00000520953 SH3RF3Q8TEJ3 882 aaPredicted RBP17.99■□□□□ 0.47
SREK1-209ENST00000520953 DAGLAQ9Y4D2 1042 aa17.99■□□□□ 0.47
SREK1-209ENST00000520953 CPA1P15085 419 aa17.98■□□□□ 0.47
SREK1-209ENST00000520953 BTDP43251 543 aa17.98■□□□□ 0.47
SREK1-209ENST00000520953 VPS33BQ9H267 617 aa17.98■□□□□ 0.47
SREK1-209ENST00000520953 EIF5BO60841 1220 aaKnown RBP17.98■□□□□ 0.47
SREK1-209ENST00000520953 JDP2Q8WYK2 163 aa17.98■□□□□ 0.47
SREK1-209ENST00000520953 U3KPZ7 1027 aaPredicted RBP17.98■□□□□ 0.47
SREK1-209ENST00000520953 SHTN1A0MZ66 631 aa17.97■□□□□ 0.47
SREK1-209ENST00000520953 CD2BP2O95400 341 aaKnown RBP17.97■□□□□ 0.47
SREK1-209ENST00000520953 MCCP23508 829 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms