RNA–Protein interactions for RNA: ENST00000520946.1

MRPS28-206, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5

Gene MRPS28, Length 411 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-206ENST00000520946 SSC5DA1L4H1 1573 aa14.52□□□□□ -0.08
MRPS28-206ENST00000520946 FAM205AQ6ZU69 1335 aa14.52□□□□□ -0.08
MRPS28-206ENST00000520946 FANCIQ9NVI1 1328 aa14.52□□□□□ -0.08
MRPS28-206ENST00000520946 CETPP11597 493 aa14.52□□□□□ -0.09
MRPS28-206ENST00000520946 VGLL4Q14135 290 aa14.52□□□□□ -0.09
MRPS28-206ENST00000520946 BEND3Q5T5X7 828 aa14.52□□□□□ -0.09
MRPS28-206ENST00000520946 TDRD7Q8NHU6 1098 aaKnown RBP14.52□□□□□ -0.09
MRPS28-206ENST00000520946 TMEM39BQ9GZU3 492 aa14.52□□□□□ -0.09
MRPS28-206ENST00000520946 PTCH2Q9Y6C5 1203 aa14.52□□□□□ -0.09
MRPS28-206ENST00000520946 IRS2Q9Y4H2 1338 aa14.51□□□□□ -0.09
MRPS28-206ENST00000520946 ZNF646O15015 1829 aaPredicted RBP14.51□□□□□ -0.09
MRPS28-206ENST00000520946 VAMP4O75379 141 aa14.51□□□□□ -0.09
MRPS28-206ENST00000520946 EXOSC9Q06265 439 aaKnown RBP14.51□□□□□ -0.09
MRPS28-206ENST00000520946 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.51□□□□□ -0.09
MRPS28-206ENST00000520946 TBC1D22AQ8WUA7 517 aa14.51□□□□□ -0.09
MRPS28-206ENST00000520946 CNKSR2Q8WXI2 1034 aa14.51□□□□□ -0.09
MRPS28-206ENST00000520946 BRI3BPQ8WY22 251 aa14.51□□□□□ -0.09
MRPS28-206ENST00000520946 TEKT1Q969V4 418 aa14.51□□□□□ -0.09
MRPS28-206ENST00000520946 ZNF333Q96JL9 665 aa14.51□□□□□ -0.09
MRPS28-206ENST00000520946 MS4A4AQ96JQ5 239 aa14.51□□□□□ -0.09
MRPS28-206ENST00000520946 ECM29Q5VYK3 1845 aa14.5□□□□□ -0.09
MRPS28-206ENST00000520946 KIAA0100Q14667 2235 aaKnown RBP14.5□□□□□ -0.09
MRPS28-206ENST00000520946 AOX1Q06278 1338 aa14.5□□□□□ -0.09
MRPS28-206ENST00000520946 ECM2O94769 699 aaPredicted RBP14.5□□□□□ -0.09
MRPS28-206ENST00000520946 SNAPC2Q13487 334 aa14.5□□□□□ -0.09
MRPS28-206ENST00000520946 FAM84BQ96KN1 310 aaPredicted RBP14.5□□□□□ -0.09
MRPS28-206ENST00000520946 WRNIP1Q96S55 665 aa14.5□□□□□ -0.09
MRPS28-206ENST00000520946 SRCIN1Q9C0H9 1055 aa14.5□□□□□ -0.09
MRPS28-206ENST00000520946 IQSEC3Q9UPP2 1182 aaPredicted RBP14.5□□□□□ -0.09
MRPS28-206ENST00000520946 MROH5Q6ZUA9 1318 aa14.49□□□□□ -0.09
MRPS28-206ENST00000520946 ALDH1L1O75891 902 aa14.49□□□□□ -0.09
MRPS28-206ENST00000520946 GNRH1P01148 92 aa14.49□□□□□ -0.09
MRPS28-206ENST00000520946 HOXD10P28358 340 aa14.49□□□□□ -0.09
MRPS28-206ENST00000520946 ZEB1P37275 1124 aaPredicted RBP14.49□□□□□ -0.09
MRPS28-206ENST00000520946 METTL24Q5JXM2 366 aa14.49□□□□□ -0.09
MRPS28-206ENST00000520946 EPHA10Q5JZY3 1008 aa14.49□□□□□ -0.09
MRPS28-206ENST00000520946 DCAF15Q66K64 600 aa14.49□□□□□ -0.09
MRPS28-206ENST00000520946 ERO1BQ86YB8 467 aa14.49□□□□□ -0.09
MRPS28-206ENST00000520946 WDR63Q8IWG1 891 aa14.49□□□□□ -0.09
MRPS28-206ENST00000520946 FAM43AQ8N2R8 423 aa14.49□□□□□ -0.09
MRPS28-206ENST00000520946 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.49□□□□□ -0.09
MRPS28-206ENST00000520946 MAST3O60307 1309 aa14.48□□□□□ -0.09
MRPS28-206ENST00000520946 TLR2O60603 784 aa14.48□□□□□ -0.09
MRPS28-206ENST00000520946 SH3TC2Q8TF17 1288 aa14.48□□□□□ -0.09
MRPS28-206ENST00000520946 DPF3Q92784 378 aa14.48□□□□□ -0.09
MRPS28-206ENST00000520946 TEPSINQ96N21 525 aa14.48□□□□□ -0.09
MRPS28-206ENST00000520946 MRS2Q9HD23 443 aa14.48□□□□□ -0.09
MRPS28-206ENST00000520946 BIN2Q9UBW5 565 aaPredicted RBP14.48□□□□□ -0.09
MRPS28-206ENST00000520946 SPDYE5A6NIY4 337 aa14.47□□□□□ -0.09
MRPS28-206ENST00000520946 CACNB3P54284 484 aa14.47□□□□□ -0.09
MRPS28-206ENST00000520946 PRMT2P55345 433 aa14.47□□□□□ -0.09
MRPS28-206ENST00000520946 LACTBP83111 547 aaPredicted RBP14.47□□□□□ -0.09
MRPS28-206ENST00000520946 HDLBPQ00341 1268 aaKnown RBP14.47□□□□□ -0.09
MRPS28-206ENST00000520946 CDAN1Q8IWY9 1227 aa14.47□□□□□ -0.09
MRPS28-206ENST00000520946 PUS3Q9BZE2 481 aaKnown RBP14.47□□□□□ -0.09
MRPS28-206ENST00000520946 COLQQ9Y215 455 aaPredicted RBP14.47□□□□□ -0.09
MRPS28-206ENST00000520946 CACNA1FO60840 1977 aa14.47□□□□□ -0.09
MRPS28-206ENST00000520946 BTBD19C9JJ37 291 aa14.46□□□□□ -0.09
MRPS28-206ENST00000520946 FMNL1O95466 1100 aaPredicted RBP14.46□□□□□ -0.09
MRPS28-206ENST00000520946 NCBP3Q53F19 620 aaKnown RBP14.46□□□□□ -0.09
MRPS28-206ENST00000520946 RAET1EQ8TD07 263 aa14.46□□□□□ -0.09
MRPS28-206ENST00000520946 ZKSCAN4Q969J2 545 aaPredicted RBP14.46□□□□□ -0.09
MRPS28-206ENST00000520946 ZCCHC17Q9NP64 241 aaKnown RBP14.46□□□□□ -0.09
MRPS28-206ENST00000520946 IRF6O14896 467 aa14.45□□□□□ -0.1
MRPS28-206ENST00000520946 IFIT1P09914 478 aaKnown RBP14.45□□□□□ -0.1
MRPS28-206ENST00000520946 FXR1P51114 621 aaKnown RBP eCLIP14.45□□□□□ -0.1
MRPS28-206ENST00000520946 PPIL2Q13356 520 aa14.45□□□□□ -0.1
MRPS28-206ENST00000520946 CCDC184Q52MB2 194 aa14.45□□□□□ -0.1
MRPS28-206ENST00000520946 NKX2-3Q8TAU0 364 aa14.45□□□□□ -0.1
MRPS28-206ENST00000520946 SUCLG2Q96I99 432 aa14.45□□□□□ -0.1
MRPS28-206ENST00000520946 ZNF341Q9BYN7 854 aa14.45□□□□□ -0.1
MRPS28-206ENST00000520946 ARHGAP39Q9C0H5 1083 aa14.45□□□□□ -0.1
MRPS28-206ENST00000520946 H0YGN5 161 aa14.44□□□□□ -0.1
MRPS28-206ENST00000520946 PSMC4P43686 418 aa14.44□□□□□ -0.1
MRPS28-206ENST00000520946 CAP1Q01518 475 aa14.44□□□□□ -0.1
MRPS28-206ENST00000520946 PPATQ06203 517 aa14.44□□□□□ -0.1
MRPS28-206ENST00000520946 MIGA2Q7L4E1 593 aa14.44□□□□□ -0.1
MRPS28-206ENST00000520946 FBXO33Q7Z6M2 555 aa14.44□□□□□ -0.1
MRPS28-206ENST00000520946 FAM83AQ86UY5 434 aa14.44□□□□□ -0.1
MRPS28-206ENST00000520946 ZDHHC15Q96MV8 337 aa14.44□□□□□ -0.1
MRPS28-206ENST00000520946 CPA4Q9UI42 421 aa14.44□□□□□ -0.1
MRPS28-206ENST00000520946 RIPOR2Q9Y4F9 1068 aa14.44□□□□□ -0.1
MRPS28-206ENST00000520946 SNCAIPQ9Y6H5 919 aa14.44□□□□□ -0.1
MRPS28-206ENST00000520946 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.43□□□□□ -0.1
MRPS28-206ENST00000520946 TRIM47Q96LD4 638 aa14.43□□□□□ -0.1
MRPS28-206ENST00000520946 HTATIP2Q9BUP3 242 aa14.43□□□□□ -0.1
MRPS28-206ENST00000520946 MRIQ9BWK5 157 aa14.43□□□□□ -0.1
MRPS28-206ENST00000520946 SUGT1Q9Y2Z0 365 aa14.43□□□□□ -0.1
MRPS28-206ENST00000520946 PDHXO00330 501 aa14.42□□□□□ -0.1
MRPS28-206ENST00000520946 PDE8BO95263 885 aa14.42□□□□□ -0.1
MRPS28-206ENST00000520946 BCAMP50895 628 aa14.42□□□□□ -0.1
MRPS28-206ENST00000520946 UBXN2AP68543 259 aa14.42□□□□□ -0.1
MRPS28-206ENST00000520946 GRIK5Q16478 980 aa14.42□□□□□ -0.1
MRPS28-206ENST00000520946 FKBP1CQ5VVH2 108 aa14.42□□□□□ -0.1
MRPS28-206ENST00000520946 BICC1Q9H694 974 aaKnown RBP14.42□□□□□ -0.1
MRPS28-206ENST00000520946 RBBP6Q7Z6E9 1792 aaKnown RBP14.42□□□□□ -0.1
MRPS28-206ENST00000520946 ANP32CO43423 234 aa14.41□□□□□ -0.1
MRPS28-206ENST00000520946 NBPF7P0C2Y1 421 aaPredicted RBP14.41□□□□□ -0.1
MRPS28-206ENST00000520946 SLC5A1P13866 664 aa14.41□□□□□ -0.1
MRPS28-206ENST00000520946 GRK4P32298 578 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms