RNA–Protein interactions for RNA: ENST00000520860.1

SRGAP3-212, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5

Gene SRGAP3, Length 422 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-212ENST00000520860 TNNI2P48788 182 aa16.84■□□□□ 0.29
SRGAP3-212ENST00000520860 SNAPC2Q13487 334 aa16.84■□□□□ 0.29
SRGAP3-212ENST00000520860 CWF19L2Q2TBE0 894 aaKnown RBP16.84■□□□□ 0.29
SRGAP3-212ENST00000520860 LRCH3Q96II8 777 aa16.84■□□□□ 0.29
SRGAP3-212ENST00000520860 TEPSINQ96N21 525 aa16.84■□□□□ 0.29
SRGAP3-212ENST00000520860 RNF208Q9H0X6 261 aa16.84■□□□□ 0.29
SRGAP3-212ENST00000520860 TDRD3Q9H7E2 651 aaKnown RBP16.84■□□□□ 0.29
SRGAP3-212ENST00000520860 RIPOR2Q9Y4F9 1068 aa16.84■□□□□ 0.29
SRGAP3-212ENST00000520860 NEURL1BA8MQ27 555 aa16.83■□□□□ 0.28
SRGAP3-212ENST00000520860 H7C1W4 665 aa16.83■□□□□ 0.28
SRGAP3-212ENST00000520860 SNAP23O00161 211 aa16.83■□□□□ 0.28
SRGAP3-212ENST00000520860 UBXN2AP68543 259 aa16.83■□□□□ 0.28
SRGAP3-212ENST00000520860 ERO1BQ86YB8 467 aa16.83■□□□□ 0.28
SRGAP3-212ENST00000520860 CDAN1Q8IWY9 1227 aa16.83■□□□□ 0.28
SRGAP3-212ENST00000520860 TRIM47Q96LD4 638 aa16.83■□□□□ 0.28
SRGAP3-212ENST00000520860 PLA2G12BQ9BX93 195 aa16.83■□□□□ 0.28
SRGAP3-212ENST00000520860 TMEM39BQ9GZU3 492 aa16.83■□□□□ 0.28
SRGAP3-212ENST00000520860 IRS2Q9Y4H2 1338 aa16.83■□□□□ 0.28
SRGAP3-212ENST00000520860 TCP10L2B9ZVM9 353 aa16.82■□□□□ 0.28
SRGAP3-212ENST00000520860 EVI5O60447 810 aa16.82■□□□□ 0.28
SRGAP3-212ENST00000520860 TAF5LO75529 589 aa16.82■□□□□ 0.28
SRGAP3-212ENST00000520860 FMNL1O95466 1100 aaPredicted RBP16.82■□□□□ 0.28
SRGAP3-212ENST00000520860 ZNF853P0CG23 659 aa16.82■□□□□ 0.28
SRGAP3-212ENST00000520860 WDR43Q15061 677 aaKnown RBP eCLIP16.82■□□□□ 0.28
SRGAP3-212ENST00000520860 IFT57Q9NWB7 429 aa16.82■□□□□ 0.28
SRGAP3-212ENST00000520860 SERPINA10Q9UK55 444 aa16.82■□□□□ 0.28
SRGAP3-212ENST00000520860 MYPNQ86TC9 1320 aa16.81■□□□□ 0.28
SRGAP3-212ENST00000520860 ANKRD18BA2A2Z9 1011 aa16.81■□□□□ 0.28
SRGAP3-212ENST00000520860 OSBPP22059 807 aa16.81■□□□□ 0.28
SRGAP3-212ENST00000520860 GNAI1P63096 354 aa16.81■□□□□ 0.28
SRGAP3-212ENST00000520860 C17orf99Q6UX52 265 aa16.81■□□□□ 0.28
SRGAP3-212ENST00000520860 DZIP1LQ8IYY4 767 aaKnown RBP16.81■□□□□ 0.28
SRGAP3-212ENST00000520860 CPA4Q9UI42 421 aa16.81■□□□□ 0.28
SRGAP3-212ENST00000520860 TTF2Q9UNY4 1162 aaKnown RBP16.81■□□□□ 0.28
SRGAP3-212ENST00000520860 IRF6O14896 467 aa16.8■□□□□ 0.28
SRGAP3-212ENST00000520860 CSF1RP07333 972 aa16.8■□□□□ 0.28
SRGAP3-212ENST00000520860 CALD1Q05682 793 aaKnown RBP16.8■□□□□ 0.28
SRGAP3-212ENST00000520860 RALBP1Q15311 655 aa16.8■□□□□ 0.28
SRGAP3-212ENST00000520860 MFSD14BQ5SR56 506 aa16.8■□□□□ 0.28
SRGAP3-212ENST00000520860 U2AF1L4Q8WU68 220 aaKnown RBP16.8■□□□□ 0.28
SRGAP3-212ENST00000520860 WRNIP1Q96S55 665 aa16.8■□□□□ 0.28
SRGAP3-212ENST00000520860 SNCAIPQ9Y6H5 919 aa16.8■□□□□ 0.28
SRGAP3-212ENST00000520860 CTGFP29279 349 aa16.79■□□□□ 0.28
SRGAP3-212ENST00000520860 PPIL2Q13356 520 aa16.79■□□□□ 0.28
SRGAP3-212ENST00000520860 C8orf58Q8NAV2 365 aa16.79■□□□□ 0.28
SRGAP3-212ENST00000520860 STK31Q9BXU1 1019 aa16.79■□□□□ 0.28
SRGAP3-212ENST00000520860 STAP2Q9UGK3 403 aa16.79■□□□□ 0.28
SRGAP3-212ENST00000520860 FAM205AQ6ZU69 1335 aa16.78■□□□□ 0.28
SRGAP3-212ENST00000520860 HOOK2Q96ED9 719 aa16.78■□□□□ 0.28
SRGAP3-212ENST00000520860 ARAP2Q8WZ64 1704 aa16.78■□□□□ 0.28
SRGAP3-212ENST00000520860 A0A0C4DFX4 3053 aa16.78■□□□□ 0.28
SRGAP3-212ENST00000520860 IFIT5Q13325 482 aaKnown RBP16.77■□□□□ 0.28
SRGAP3-212ENST00000520860 GCKRQ14397 625 aa16.77■□□□□ 0.28
SRGAP3-212ENST00000520860 GPR153Q6NV75 609 aa16.77■□□□□ 0.28
SRGAP3-212ENST00000520860 DEFB123Q8N688 67 aa16.77■□□□□ 0.28
SRGAP3-212ENST00000520860 SLAIN1Q8ND83 568 aa16.77■□□□□ 0.28
SRGAP3-212ENST00000520860 ZKSCAN4Q969J2 545 aaPredicted RBP16.77■□□□□ 0.28
SRGAP3-212ENST00000520860 MYH16Q9H6N6 1097 aa16.77■□□□□ 0.28
SRGAP3-212ENST00000520860 PDHXO00330 501 aa16.76■□□□□ 0.27
SRGAP3-212ENST00000520860 SGPL1O95470 568 aa16.76■□□□□ 0.27
SRGAP3-212ENST00000520860 CRKP46108 304 aa16.76■□□□□ 0.27
SRGAP3-212ENST00000520860 ANKRD23Q86SG2 305 aa16.76■□□□□ 0.27
SRGAP3-212ENST00000520860 UNC93B1Q9H1C4 597 aa16.76■□□□□ 0.27
SRGAP3-212ENST00000520860 CHMP3Q9Y3E7 222 aa16.76■□□□□ 0.27
SRGAP3-212ENST00000520860 PLIN1O60240 522 aa16.75■□□□□ 0.27
SRGAP3-212ENST00000520860 TFRCP02786 760 aaKnown RBP16.75■□□□□ 0.27
SRGAP3-212ENST00000520860 CAPN2P17655 700 aa16.75■□□□□ 0.27
SRGAP3-212ENST00000520860 CASP7P55210 303 aa16.75■□□□□ 0.27
SRGAP3-212ENST00000520860 FCGRTP55899 365 aa16.75■□□□□ 0.27
SRGAP3-212ENST00000520860 PRKCZQ05513 592 aa16.75■□□□□ 0.27
SRGAP3-212ENST00000520860 PPATQ06203 517 aa16.75■□□□□ 0.27
SRGAP3-212ENST00000520860 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.75■□□□□ 0.27
SRGAP3-212ENST00000520860 TMOD2Q9NZR1 351 aa16.75■□□□□ 0.27
SRGAP3-212ENST00000520860 STXBP5LQ9Y2K9 1186 aa16.75■□□□□ 0.27
SRGAP3-212ENST00000520860 COL6A3P12111 3177 aa16.74■□□□□ 0.27
SRGAP3-212ENST00000520860 DCAF15Q66K64 600 aa16.74■□□□□ 0.27
SRGAP3-212ENST00000520860 TDRD7Q8NHU6 1098 aaKnown RBP16.74■□□□□ 0.27
SRGAP3-212ENST00000520860 ADAMTS8Q9UP79 889 aa16.74■□□□□ 0.27
SRGAP3-212ENST00000520860 ADGRA2Q96PE1 1338 aa16.73■□□□□ 0.27
SRGAP3-212ENST00000520860 CACNB3P54284 484 aa16.73■□□□□ 0.27
SRGAP3-212ENST00000520860 TAF7LQ5H9L4 462 aa16.73■□□□□ 0.27
SRGAP3-212ENST00000520860 TSPYL6Q8N831 410 aa16.73■□□□□ 0.27
SRGAP3-212ENST00000520860 PARK7Q99497 189 aaKnown RBP16.73■□□□□ 0.27
SRGAP3-212ENST00000520860 MYBBP1AQ9BQG0 1328 aaKnown RBP16.72■□□□□ 0.27
SRGAP3-212ENST00000520860 A0A1B0GUL6 1792 aa16.72■□□□□ 0.27
SRGAP3-212ENST00000520860 ADCY3O60266 1144 aa16.72■□□□□ 0.27
SRGAP3-212ENST00000520860 HIBADHP31937 336 aaKnown RBP16.72■□□□□ 0.27
SRGAP3-212ENST00000520860 BMP8BP34820 402 aa16.72■□□□□ 0.27
SRGAP3-212ENST00000520860 Q7L0L9 218 aa16.72■□□□□ 0.27
SRGAP3-212ENST00000520860 DEFB118Q96PH6 123 aa16.72■□□□□ 0.27
SRGAP3-212ENST00000520860 ZNF341Q9BYN7 854 aa16.72■□□□□ 0.27
SRGAP3-212ENST00000520860 CNNM1Q9NRU3 951 aa16.72■□□□□ 0.27
SRGAP3-212ENST00000520860 HDLBPQ00341 1268 aaKnown RBP16.71■□□□□ 0.27
SRGAP3-212ENST00000520860 LDHAL6AQ6ZMR3 332 aa16.71■□□□□ 0.27
SRGAP3-212ENST00000520860 G2E3Q7L622 706 aa16.71■□□□□ 0.27
SRGAP3-212ENST00000520860 FAM83AQ86UY5 434 aa16.71■□□□□ 0.27
SRGAP3-212ENST00000520860 LINS1Q8NG48 757 aa16.71■□□□□ 0.27
SRGAP3-212ENST00000520860 TEKT1Q969V4 418 aa16.71■□□□□ 0.27
SRGAP3-212ENST00000520860 GDF15Q99988 308 aa16.71■□□□□ 0.27
SRGAP3-212ENST00000520860 COL25A1Q9BXS0 654 aaPredicted RBP16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms