RNA–Protein interactions for RNA: ENST00000520700.1

TRAM1-203, Transcript of translocation associated membrane protein 1, humanhuman

TSL 5

Gene TRAM1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-203ENST00000520700 TTF2Q9UNY4 1162 aaKnown RBP21.18■□□□□ 0.98
TRAM1-203ENST00000520700 MYH13Q9UKX3 1938 aa21.17■□□□□ 0.98
TRAM1-203ENST00000520700 TSHZ3Q63HK5 1081 aa21.17■□□□□ 0.98
TRAM1-203ENST00000520700 HHIPL2Q6UWX4 724 aa21.17■□□□□ 0.98
TRAM1-203ENST00000520700 TAF1DQ9H5J8 278 aaPredicted RBP21.17■□□□□ 0.98
TRAM1-203ENST00000520700 ANTXR1Q9H6X2 564 aa21.17■□□□□ 0.98
TRAM1-203ENST00000520700 RRAGCQ9HB90 399 aa21.17■□□□□ 0.98
TRAM1-203ENST00000520700 PIH1D3Q9NQM4 214 aaKnown RBP21.17■□□□□ 0.98
TRAM1-203ENST00000520700 SCN4AP35499 1836 aa21.17■□□□□ 0.98
TRAM1-203ENST00000520700 USP50Q70EL3 339 aaPredicted RBP21.16■□□□□ 0.98
TRAM1-203ENST00000520700 PNMA8AQ86V59 439 aaPredicted RBP21.16■□□□□ 0.98
TRAM1-203ENST00000520700 SLF2Q8IX21 1173 aa21.16■□□□□ 0.98
TRAM1-203ENST00000520700 ZBED3Q96IU2 234 aaPredicted RBP21.16■□□□□ 0.98
TRAM1-203ENST00000520700 DNAJC2Q99543 621 aaKnown RBP21.16■□□□□ 0.98
TRAM1-203ENST00000520700 LRP2BPQ9P2M1 347 aa21.16■□□□□ 0.98
TRAM1-203ENST00000520700 GOLIM4O00461 696 aa21.15■□□□□ 0.98
TRAM1-203ENST00000520700 EPHX2P34913 555 aa21.15■□□□□ 0.98
TRAM1-203ENST00000520700 NSUN4Q96CB9 384 aaKnown RBP21.15■□□□□ 0.98
TRAM1-203ENST00000520700 GPBP1L1Q9HC44 474 aaPredicted RBP21.15■□□□□ 0.98
TRAM1-203ENST00000520700 MYOZ2Q9NPC6 264 aa21.15■□□□□ 0.98
TRAM1-203ENST00000520700 NDUFB9Q9Y6M9 179 aa21.15■□□□□ 0.98
TRAM1-203ENST00000520700 SHTN1A0MZ66 631 aa21.14■□□□□ 0.97
TRAM1-203ENST00000520700 LDHCP07864 332 aa21.14■□□□□ 0.97
TRAM1-203ENST00000520700 GSTO1P78417 241 aa21.14■□□□□ 0.97
TRAM1-203ENST00000520700 MECOMQ03112 1051 aa21.14■□□□□ 0.97
TRAM1-203ENST00000520700 MAP3K12Q12852 859 aa21.14■□□□□ 0.97
TRAM1-203ENST00000520700 TEKT1Q969V4 418 aa21.14■□□□□ 0.97
TRAM1-203ENST00000520700 ZDHHC15Q96MV8 337 aa21.14■□□□□ 0.97
TRAM1-203ENST00000520700 NMRK2Q9NPI5 230 aa21.14■□□□□ 0.97
TRAM1-203ENST00000520700 RAI14Q9P0K7 980 aa21.14■□□□□ 0.97
TRAM1-203ENST00000520700 F8W031 263 aaPredicted RBP21.13■□□□□ 0.97
TRAM1-203ENST00000520700 CRKP46108 304 aa21.13■□□□□ 0.97
TRAM1-203ENST00000520700 DZIP1Q86YF9 867 aaKnown RBP21.13■□□□□ 0.97
TRAM1-203ENST00000520700 KBTBD3Q8NAB2 608 aa21.13■□□□□ 0.97
TRAM1-203ENST00000520700 ZNF784Q8NCA9 323 aaPredicted RBP21.13■□□□□ 0.97
TRAM1-203ENST00000520700 ZNF384Q8TF68 577 aa21.13■□□□□ 0.97
TRAM1-203ENST00000520700 ZC3H15Q8WU90 426 aaKnown RBP21.13■□□□□ 0.97
TRAM1-203ENST00000520700 EVI5LQ96CN4 794 aa21.13■□□□□ 0.97
TRAM1-203ENST00000520700 PGAP2Q9UHJ9 254 aa21.13■□□□□ 0.97
TRAM1-203ENST00000520700 GAKO14976 1311 aa21.12■□□□□ 0.97
TRAM1-203ENST00000520700 DLGAP5Q15398 846 aa21.12■□□□□ 0.97
TRAM1-203ENST00000520700 CFAP100Q494V2 611 aa21.12■□□□□ 0.97
TRAM1-203ENST00000520700 SAMD7Q7Z3H4 446 aa21.12■□□□□ 0.97
TRAM1-203ENST00000520700 EDC3Q96F86 508 aaKnown RBP21.12■□□□□ 0.97
TRAM1-203ENST00000520700 SPDYE2BA6NHP3 402 aa21.11■□□□□ 0.97
TRAM1-203ENST00000520700 IDH1O75874 414 aaKnown RBP21.11■□□□□ 0.97
TRAM1-203ENST00000520700 SPDYE6P0CI01 402 aa21.11■□□□□ 0.97
TRAM1-203ENST00000520700 HIRAP54198 1017 aaPredicted RBP21.11■□□□□ 0.97
TRAM1-203ENST00000520700 KIF4BQ2VIQ3 1234 aa21.11■□□□□ 0.97
TRAM1-203ENST00000520700 ZSCAN25Q6NSZ9 544 aa21.11■□□□□ 0.97
TRAM1-203ENST00000520700 ZNF526Q8TF50 670 aaPredicted RBP21.11■□□□□ 0.97
TRAM1-203ENST00000520700 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.11■□□□□ 0.97
TRAM1-203ENST00000520700 GPR75-ASB3A0A0A6YYF3 556 aa21.1■□□□□ 0.97
TRAM1-203ENST00000520700 WNT10BO00744 389 aa21.1■□□□□ 0.97
TRAM1-203ENST00000520700 MAP4K4O95819 1239 aaPredicted RBP21.1■□□□□ 0.97
TRAM1-203ENST00000520700 EGFRP00533 1210 aa21.1■□□□□ 0.97
TRAM1-203ENST00000520700 UBE3CQ15386 1083 aa21.1■□□□□ 0.97
TRAM1-203ENST00000520700 LRRFIP1Q32MZ4 808 aaKnown RBP21.1■□□□□ 0.97
TRAM1-203ENST00000520700 TBC1D10BQ4KMP7 808 aaPredicted RBP21.1■□□□□ 0.97
TRAM1-203ENST00000520700 TTC22Q5TAA0 569 aa21.1■□□□□ 0.97
TRAM1-203ENST00000520700 NAA16Q6N069 864 aaPredicted RBP21.1■□□□□ 0.97
TRAM1-203ENST00000520700 APOBEC3HQ6NTF7 200 aaKnown RBP21.1■□□□□ 0.97
TRAM1-203ENST00000520700 TRPM4Q8TD43 1214 aa21.1■□□□□ 0.97
TRAM1-203ENST00000520700 KIF3CO14782 793 aa21.09■□□□□ 0.97
TRAM1-203ENST00000520700 ZFYP08048 801 aaPredicted RBP21.09■□□□□ 0.97
TRAM1-203ENST00000520700 PPP4CP60510 307 aa21.09■□□□□ 0.97
TRAM1-203ENST00000520700 DIXDC1Q155Q3 683 aa21.09■□□□□ 0.97
TRAM1-203ENST00000520700 SLC9C2Q5TAH2 1124 aa21.09■□□□□ 0.97
TRAM1-203ENST00000520700 PRMT6Q96LA8 375 aaPredicted RBP21.09■□□□□ 0.97
TRAM1-203ENST00000520700 DAGLAQ9Y4D2 1042 aa21.09■□□□□ 0.97
TRAM1-203ENST00000520700 MROH7-TTC4A0A0A0MT08 1334 aa21.08■□□□□ 0.97
TRAM1-203ENST00000520700 TCRBV5S4A2TA0A5A2 114 aa21.08■□□□□ 0.97
TRAM1-203ENST00000520700 PDE6AP16499 860 aa21.08■□□□□ 0.97
TRAM1-203ENST00000520700 ADD2P35612 726 aa21.08■□□□□ 0.97
TRAM1-203ENST00000520700 CNTROBQ8N137 903 aa21.08■□□□□ 0.97
TRAM1-203ENST00000520700 GTF3C3Q9Y5Q9 886 aa21.08■□□□□ 0.97
TRAM1-203ENST00000520700 DOCK2Q92608 1830 aa21.08■□□□□ 0.96
TRAM1-203ENST00000520700 NBPF9Q3BBW0 867 aa21.07■□□□□ 0.96
TRAM1-203ENST00000520700 RBM26Q5T8P6 1007 aaKnown RBP21.07■□□□□ 0.96
TRAM1-203ENST00000520700 LDHDQ86WU2 507 aa21.07■□□□□ 0.96
TRAM1-203ENST00000520700 CERS3Q8IU89 383 aa21.07■□□□□ 0.96
TRAM1-203ENST00000520700 MAGEB6Q8N7X4 407 aa21.07■□□□□ 0.96
TRAM1-203ENST00000520700 RFX7Q2KHR2 1363 aa21.07■□□□□ 0.96
TRAM1-203ENST00000520700 PITPNM2Q9BZ72 1349 aa21.06■□□□□ 0.96
TRAM1-203ENST00000520700 MYO1BO43795 1136 aa21.06■□□□□ 0.96
TRAM1-203ENST00000520700 GSPT1P15170 499 aaKnown RBP21.06■□□□□ 0.96
TRAM1-203ENST00000520700 CYP7A1P22680 504 aa21.06■□□□□ 0.96
TRAM1-203ENST00000520700 RBM5P52756 815 aaKnown RBP eCLIP21.06■□□□□ 0.96
TRAM1-203ENST00000520700 FKBP1CQ5VVH2 108 aa21.06■□□□□ 0.96
TRAM1-203ENST00000520700 RNF113AO15541 343 aaKnown RBP21.05■□□□□ 0.96
TRAM1-203ENST00000520700 PCDHAC2Q9Y5I4 1007 aa21.05■□□□□ 0.96
TRAM1-203ENST00000520700 ZNF532Q9HCE3 1301 aa21.04■□□□□ 0.96
TRAM1-203ENST00000520700 TRIM6-TRIM34B2RNG4 842 aa21.04■□□□□ 0.96
TRAM1-203ENST00000520700 BAG3O95817 575 aa21.04■□□□□ 0.96
TRAM1-203ENST00000520700 PLCG2P16885 1265 aa21.04■□□□□ 0.96
TRAM1-203ENST00000520700 SPDYE2Q495Y8 402 aa21.04■□□□□ 0.96
TRAM1-203ENST00000520700 BMP2KLQ5H9B9 411 aa21.04■□□□□ 0.96
TRAM1-203ENST00000520700 ADGRA1Q86SQ6 560 aa21.04■□□□□ 0.96
TRAM1-203ENST00000520700 FSD1Q9BTV5 496 aa21.04■□□□□ 0.96
TRAM1-203ENST00000520700 MYO5AQ9Y4I1 1855 aaKnown RBP21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms