RNA–Protein interactions for RNA: ENST00000520520.1

CTNNA1-223, Transcript of catenin alpha 1, human

TSL 3

Gene CTNNA1, Length 484 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNA1-223	ENST00000520520	CRAMP1	Q96RY5	1269 aa		10.26	□□□□□ -0.77
CTNNA1-223	ENST00000520520	GLIS2	Q9BZE0	524 aa	Predicted RBP	10.26	□□□□□ -0.77
CTNNA1-223	ENST00000520520	PDCL3	Q9H2J4	239 aa		10.26	□□□□□ -0.77
CTNNA1-223	ENST00000520520	RBM27	Q9P2N5	1060 aa	Known RBP	10.26	□□□□□ -0.77
CTNNA1-223	ENST00000520520	LIMCH1	Q9UPQ0	1083 aa		10.26	□□□□□ -0.77
CTNNA1-223	ENST00000520520	SMC3	Q9UQE7	1217 aa		10.26	□□□□□ -0.77
CTNNA1-223	ENST00000520520	RIC1	Q4ADV7	1423 aa		10.25	□□□□□ -0.77
CTNNA1-223	ENST00000520520	SHTN1	A0MZ66	631 aa		10.25	□□□□□ -0.77
CTNNA1-223	ENST00000520520	SRGAP3	O43295	1099 aa		10.25	□□□□□ -0.77
CTNNA1-223	ENST00000520520	ZSCAN22	P10073	491 aa	Predicted RBP	10.25	□□□□□ -0.77
CTNNA1-223	ENST00000520520	ZKSCAN1	P17029	563 aa	Predicted RBP	10.25	□□□□□ -0.77
CTNNA1-223	ENST00000520520	CXCL9	Q07325	125 aa		10.25	□□□□□ -0.77
CTNNA1-223	ENST00000520520	PDAP1	Q13442	181 aa	Known RBP	10.25	□□□□□ -0.77
CTNNA1-223	ENST00000520520	PARP10	Q53GL7	1025 aa		10.25	□□□□□ -0.77
CTNNA1-223	ENST00000520520	SASS6	Q6UVJ0	657 aa		10.25	□□□□□ -0.77
CTNNA1-223	ENST00000520520	CLASRP	Q8N2M8	674 aa	Known RBP	10.25	□□□□□ -0.77
CTNNA1-223	ENST00000520520	DNAAF4	Q8WXU2	420 aa		10.25	□□□□□ -0.77
CTNNA1-223	ENST00000520520	TM6SF1	Q9BZW5	370 aa		10.25	□□□□□ -0.77
CTNNA1-223	ENST00000520520	USP44	Q9H0E7	712 aa		10.25	□□□□□ -0.77
CTNNA1-223	ENST00000520520	ADARB2	Q9NS39	739 aa	Known RBP	10.25	□□□□□ -0.77
CTNNA1-223	ENST00000520520	GPRC5D	Q9NZD1	345 aa		10.25	□□□□□ -0.77
CTNNA1-223	ENST00000520520	PALD1	Q9ULE6	856 aa		10.25	□□□□□ -0.77
CTNNA1-223	ENST00000520520	ATP6V0A2	Q9Y487	856 aa		10.25	□□□□□ -0.77
CTNNA1-223	ENST00000520520	TRPM7	Q96QT4	1865 aa		10.25	□□□□□ -0.77
CTNNA1-223	ENST00000520520	RPAP1	Q9BWH6	1393 aa	Predicted RBP	10.25	□□□□□ -0.77
CTNNA1-223	ENST00000520520	TAF1	P21675	1872 aa		10.24	□□□□□ -0.77
CTNNA1-223	ENST00000520520	GOLGA6L6	A8MZA4	724 aa		10.24	□□□□□ -0.77
CTNNA1-223	ENST00000520520	DYNC1I1	O14576	645 aa		10.24	□□□□□ -0.77
CTNNA1-223	ENST00000520520	DDX58	O95786	925 aa	Known RBP	10.24	□□□□□ -0.77
CTNNA1-223	ENST00000520520	PDC	P20941	246 aa		10.24	□□□□□ -0.77
CTNNA1-223	ENST00000520520	PSEN1	P49768	467 aa		10.24	□□□□□ -0.77
CTNNA1-223	ENST00000520520	HMGN5	P82970	282 aa	Known RBP	10.24	□□□□□ -0.77
CTNNA1-223	ENST00000520520	MTX1	Q13505	466 aa		10.24	□□□□□ -0.77
CTNNA1-223	ENST00000520520	ANKRD1	Q15327	319 aa		10.24	□□□□□ -0.77
CTNNA1-223	ENST00000520520	VPS53	Q5VIR6	699 aa		10.24	□□□□□ -0.77
CTNNA1-223	ENST00000520520	CIAPIN1	Q6FI81	312 aa		10.24	□□□□□ -0.77
CTNNA1-223	ENST00000520520	DLK2	Q6UY11	383 aa		10.24	□□□□□ -0.77
CTNNA1-223	ENST00000520520	DDX46	Q7L014	1031 aa	Known RBP	10.24	□□□□□ -0.77
CTNNA1-223	ENST00000520520	COPS6	Q7L5N1	327 aa		10.24	□□□□□ -0.77
CTNNA1-223	ENST00000520520	MPND	Q8N594	471 aa		10.24	□□□□□ -0.77
CTNNA1-223	ENST00000520520	SUPT20H	Q8NEM7	779 aa		10.24	□□□□□ -0.77
CTNNA1-223	ENST00000520520	XAGE3	Q8WTP9	111 aa		10.24	□□□□□ -0.77
CTNNA1-223	ENST00000520520	TRMT112	Q9UI30	125 aa	Known RBP	10.24	□□□□□ -0.77
CTNNA1-223	ENST00000520520	ZNRF3	Q9ULT6	936 aa		10.24	□□□□□ -0.77
CTNNA1-223	ENST00000520520	TLL2	Q9Y6L7	1015 aa		10.24	□□□□□ -0.77
CTNNA1-223	ENST00000520520	LAMB2	P55268	1798 aa		10.24	□□□□□ -0.77
CTNNA1-223	ENST00000520520	RIMBP2	O15034	1052 aa		10.23	□□□□□ -0.77
CTNNA1-223	ENST00000520520	STX6	O43752	255 aa		10.23	□□□□□ -0.77
CTNNA1-223	ENST00000520520	GABBR2	O75899	941 aa		10.23	□□□□□ -0.77
CTNNA1-223	ENST00000520520	PSMA5	P28066	241 aa		10.23	□□□□□ -0.77
CTNNA1-223	ENST00000520520	PDIA6	Q15084	440 aa		10.23	□□□□□ -0.77
CTNNA1-223	ENST00000520520	GRIPAP1	Q4V328	841 aa		10.23	□□□□□ -0.77
CTNNA1-223	ENST00000520520	RNF20	Q5VTR2	975 aa		10.23	□□□□□ -0.77
CTNNA1-223	ENST00000520520	TSHZ3	Q63HK5	1081 aa		10.23	□□□□□ -0.77
CTNNA1-223	ENST00000520520	PI4K2B	Q8TCG2	481 aa		10.23	□□□□□ -0.77
CTNNA1-223	ENST00000520520	TRPM4	Q8TD43	1214 aa		10.23	□□□□□ -0.77
CTNNA1-223	ENST00000520520	EVI5L	Q96CN4	794 aa		10.23	□□□□□ -0.77
CTNNA1-223	ENST00000520520	UPF3B	Q9BZI7	483 aa	Known RBP	10.23	□□□□□ -0.77
CTNNA1-223	ENST00000520520	ECHDC1	Q9NTX5	307 aa		10.23	□□□□□ -0.77
CTNNA1-223	ENST00000520520	DBF4	Q9UBU7	674 aa	Predicted RBP	10.23	□□□□□ -0.77
CTNNA1-223	ENST00000520520	SNX14	Q9Y5W7	946 aa		10.23	□□□□□ -0.77
CTNNA1-223	ENST00000520520	CYP46A1	Q9Y6A2	500 aa		10.23	□□□□□ -0.77
CTNNA1-223	ENST00000520520	F13A1	P00488	732 aa		10.22	□□□□□ -0.77
CTNNA1-223	ENST00000520520	IFIT2	P09913	472 aa	Known RBP	10.22	□□□□□ -0.77
CTNNA1-223	ENST00000520520	RBM26	Q5T8P6	1007 aa	Known RBP	10.22	□□□□□ -0.77
CTNNA1-223	ENST00000520520	FOXD4L5	Q5VV16	416 aa	Predicted RBP	10.22	□□□□□ -0.77
CTNNA1-223	ENST00000520520	NOL8	Q76FK4	1167 aa	Known RBP	10.22	□□□□□ -0.77
CTNNA1-223	ENST00000520520	USP48	Q86UV5	1035 aa		10.22	□□□□□ -0.77
CTNNA1-223	ENST00000520520	NLRP10	Q86W26	655 aa		10.22	□□□□□ -0.77
CTNNA1-223	ENST00000520520	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	10.22	□□□□□ -0.77
CTNNA1-223	ENST00000520520	BBX	Q8WY36	941 aa	Predicted RBP	10.22	□□□□□ -0.77
CTNNA1-223	ENST00000520520	TTC14	Q96N46	770 aa		10.22	□□□□□ -0.77
CTNNA1-223	ENST00000520520	LSG1	Q9H089	658 aa	Known RBP	10.22	□□□□□ -0.77
CTNNA1-223	ENST00000520520	DBNDD1	Q9H9R9	158 aa		10.22	□□□□□ -0.77
CTNNA1-223	ENST00000520520	IL1RAPL2	Q9NP60	686 aa		10.22	□□□□□ -0.77
CTNNA1-223	ENST00000520520	CNOT7	Q9UIV1	285 aa	Known RBP	10.22	□□□□□ -0.77
CTNNA1-223	ENST00000520520	TAOK2	Q9UL54	1235 aa		10.22	□□□□□ -0.77
CTNNA1-223	ENST00000520520	CCDC171	Q6TFL3	1326 aa		10.22	□□□□□ -0.77
CTNNA1-223	ENST00000520520	RFX7	Q2KHR2	1363 aa		10.22	□□□□□ -0.77
CTNNA1-223	ENST00000520520	ANKRD36C	Q5JPF3	1778 aa		10.21	□□□□□ -0.77
CTNNA1-223	ENST00000520520	ATP5J2-PTCD1	G3V325	749 aa		10.21	□□□□□ -0.77
CTNNA1-223	ENST00000520520	CLCN6	P51797	869 aa		10.21	□□□□□ -0.77
CTNNA1-223	ENST00000520520	HIRA	P54198	1017 aa	Predicted RBP	10.21	□□□□□ -0.77
CTNNA1-223	ENST00000520520	AK2	P54819	239 aa		10.21	□□□□□ -0.77
CTNNA1-223	ENST00000520520	GRAP	Q13588	217 aa		10.21	□□□□□ -0.77
CTNNA1-223	ENST00000520520	TNIP1	Q15025	636 aa		10.21	□□□□□ -0.77
CTNNA1-223	ENST00000520520	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	10.21	□□□□□ -0.77
CTNNA1-223	ENST00000520520	HSP90AB3P	Q58FF7	597 aa		10.21	□□□□□ -0.77
CTNNA1-223	ENST00000520520	BEND3	Q5T5X7	828 aa		10.21	□□□□□ -0.77
CTNNA1-223	ENST00000520520	SAMD7	Q7Z3H4	446 aa		10.21	□□□□□ -0.77
CTNNA1-223	ENST00000520520	SAPCD2	Q86UD0	394 aa		10.21	□□□□□ -0.77
CTNNA1-223	ENST00000520520	SP8	Q8IXZ3	490 aa		10.21	□□□□□ -0.77
CTNNA1-223	ENST00000520520	MICALL2	Q8IY33	904 aa		10.21	□□□□□ -0.77
CTNNA1-223	ENST00000520520	GRAPL	Q8TC17	118 aa	Predicted RBP	10.21	□□□□□ -0.77
CTNNA1-223	ENST00000520520	PRIMPOL	Q96LW4	560 aa		10.21	□□□□□ -0.77
CTNNA1-223	ENST00000520520	R3HCC1	Q9Y3T6	440 aa	Known RBP	10.21	□□□□□ -0.77
CTNNA1-223	ENST00000520520	THSD7B	Q9C0I4	1608 aa		10.21	□□□□□ -0.78
CTNNA1-223	ENST00000520520	UQCRHL	A0A096LP55	91 aa		10.2	□□□□□ -0.78
CTNNA1-223	ENST00000520520	YDJC	A8MPS7	323 aa		10.2	□□□□□ -0.78
CTNNA1-223	ENST00000520520	C6orf229	H3BNL8	230 aa		10.2	□□□□□ -0.78

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