RNA–Protein interactions for RNA: ENST00000520497.1

VAPB-206, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 937 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-206ENST00000520497 ZNF589Q86UQ0 364 aaPredicted RBP10.27□□□□□ -0.77
VAPB-206ENST00000520497 RTKN2Q8IZC4 609 aa10.27□□□□□ -0.77
VAPB-206ENST00000520497 EYA3Q99504 573 aa10.27□□□□□ -0.77
VAPB-206ENST00000520497 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.27□□□□□ -0.77
VAPB-206ENST00000520497 LSG1Q9H089 658 aaKnown RBP10.27□□□□□ -0.77
VAPB-206ENST00000520497 HELLSQ9NRZ9 838 aa10.27□□□□□ -0.77
VAPB-206ENST00000520497 MAST3O60307 1309 aa10.27□□□□□ -0.77
VAPB-206ENST00000520497 FAM205AQ6ZU69 1335 aa10.27□□□□□ -0.77
VAPB-206ENST00000520497 IGSF3O75054 1194 aa10.26□□□□□ -0.77
VAPB-206ENST00000520497 FRAT2O75474 233 aaPredicted RBP10.26□□□□□ -0.77
VAPB-206ENST00000520497 IDH1O75874 414 aaKnown RBP10.26□□□□□ -0.77
VAPB-206ENST00000520497 KIAA2012Q0VF49 1180 aa10.26□□□□□ -0.77
VAPB-206ENST00000520497 MAP3K12Q12852 859 aa10.26□□□□□ -0.77
VAPB-206ENST00000520497 BECN1Q14457 450 aa10.26□□□□□ -0.77
VAPB-206ENST00000520497 WASHC4Q2M389 1173 aa10.26□□□□□ -0.77
VAPB-206ENST00000520497 MCMDC2Q4G0Z9 681 aa10.26□□□□□ -0.77
VAPB-206ENST00000520497 DALRD3Q5D0E6 543 aaKnown RBP10.26□□□□□ -0.77
VAPB-206ENST00000520497 SLC9C2Q5TAH2 1124 aa10.26□□□□□ -0.77
VAPB-206ENST00000520497 SUPT20HQ8NEM7 779 aa10.26□□□□□ -0.77
VAPB-206ENST00000520497 WDR66Q8TBY9 1149 aa10.26□□□□□ -0.77
VAPB-206ENST00000520497 APPBP2Q92624 585 aa10.26□□□□□ -0.77
VAPB-206ENST00000520497 OSBP2Q969R2 916 aa10.26□□□□□ -0.77
VAPB-206ENST00000520497 IPO9Q96P70 1041 aaKnown RBP10.26□□□□□ -0.77
VAPB-206ENST00000520497 C22orf23Q9BZE7 217 aa10.26□□□□□ -0.77
VAPB-206ENST00000520497 ZC3H12CQ9C0D7 883 aaKnown RBP10.26□□□□□ -0.77
VAPB-206ENST00000520497 TIAM2Q8IVF5 1701 aa10.26□□□□□ -0.77
VAPB-206ENST00000520497 CCDC171Q6TFL3 1326 aa10.26□□□□□ -0.77
VAPB-206ENST00000520497 M0R2C6 588 aa10.25□□□□□ -0.77
VAPB-206ENST00000520497 RIMBP2O15034 1052 aa10.25□□□□□ -0.77
VAPB-206ENST00000520497 TMED8Q6PL24 325 aaPredicted RBP10.25□□□□□ -0.77
VAPB-206ENST00000520497 ZNF384Q8TF68 577 aa10.25□□□□□ -0.77
VAPB-206ENST00000520497 IL17RAQ96F46 866 aa10.25□□□□□ -0.77
VAPB-206ENST00000520497 SEC62Q99442 399 aaKnown RBP10.25□□□□□ -0.77
VAPB-206ENST00000520497 NMRK2Q9NPI5 230 aa10.25□□□□□ -0.77
VAPB-206ENST00000520497 ANO2Q9NQ90 1003 aa10.25□□□□□ -0.77
VAPB-206ENST00000520497 ZNF532Q9HCE3 1301 aa10.25□□□□□ -0.77
VAPB-206ENST00000520497 MCCP23508 829 aa10.24□□□□□ -0.77
VAPB-206ENST00000520497 PRDX5P30044 214 aa10.24□□□□□ -0.77
VAPB-206ENST00000520497 PRELPP51888 382 aa10.24□□□□□ -0.77
VAPB-206ENST00000520497 PTH1RQ03431 593 aa10.24□□□□□ -0.77
VAPB-206ENST00000520497 CHAF1AQ13111 956 aaPredicted RBP10.24□□□□□ -0.77
VAPB-206ENST00000520497 AOC3Q16853 763 aa10.24□□□□□ -0.77
VAPB-206ENST00000520497 CCDC129Q6ZRS4 1044 aa10.24□□□□□ -0.77
VAPB-206ENST00000520497 PODNQ7Z5L7 613 aa10.24□□□□□ -0.77
VAPB-206ENST00000520497 ZGPATQ8N5A5 531 aaKnown RBP10.24□□□□□ -0.77
VAPB-206ENST00000520497 MAGEB6Q8N7X4 407 aa10.24□□□□□ -0.77
VAPB-206ENST00000520497 MAP4K1Q92918 833 aa10.24□□□□□ -0.77
VAPB-206ENST00000520497 NSUN4Q96CB9 384 aaKnown RBP10.24□□□□□ -0.77
VAPB-206ENST00000520497 PUS7LQ9H0K6 701 aaKnown RBP10.24□□□□□ -0.77
VAPB-206ENST00000520497 VPS33BQ9H267 617 aa10.24□□□□□ -0.77
VAPB-206ENST00000520497 LRP2BPQ9P2M1 347 aa10.24□□□□□ -0.77
VAPB-206ENST00000520497 ABCF2Q9UG63 623 aa10.24□□□□□ -0.77
VAPB-206ENST00000520497 LTBP3Q9NS15 1303 aa10.24□□□□□ -0.77
VAPB-206ENST00000520497 FOXP2O15409 715 aa10.23□□□□□ -0.77
VAPB-206ENST00000520497 ECE2O60344 883 aa10.23□□□□□ -0.77
VAPB-206ENST00000520497 HSPA4P34932 840 aa10.23□□□□□ -0.77
VAPB-206ENST00000520497 MECOMQ03112 1051 aa10.23□□□□□ -0.77
VAPB-206ENST00000520497 DOK7Q18PE1 504 aa10.23□□□□□ -0.77
VAPB-206ENST00000520497 C9orf131Q5VYM1 1079 aa10.23□□□□□ -0.77
VAPB-206ENST00000520497 SPTY2D1Q68D10 685 aaPredicted RBP10.23□□□□□ -0.77
VAPB-206ENST00000520497 KIAA1211Q6ZU35 1233 aa10.23□□□□□ -0.77
VAPB-206ENST00000520497 TBC1D22AQ8WUA7 517 aa10.23□□□□□ -0.77
VAPB-206ENST00000520497 KIF2CQ99661 725 aa10.23□□□□□ -0.77
VAPB-206ENST00000520497 DSCC1Q9BVC3 393 aa10.23□□□□□ -0.77
VAPB-206ENST00000520497 JAG2Q9Y219 1238 aa10.23□□□□□ -0.77
VAPB-206ENST00000520497 NFKBIEO00221 500 aa10.22□□□□□ -0.77
VAPB-206ENST00000520497 GPAA1O43292 621 aa10.22□□□□□ -0.77
VAPB-206ENST00000520497 PPIP5K2O43314 1243 aa10.22□□□□□ -0.77
VAPB-206ENST00000520497 GTF2IP78347 998 aa10.22□□□□□ -0.77
VAPB-206ENST00000520497 RASSF7Q02833 373 aa10.22□□□□□ -0.77
VAPB-206ENST00000520497 GRIK5Q16478 980 aa10.22□□□□□ -0.77
VAPB-206ENST00000520497 MFSD14BQ5SR56 506 aa10.22□□□□□ -0.77
VAPB-206ENST00000520497 VPS53Q5VIR6 699 aa10.22□□□□□ -0.77
VAPB-206ENST00000520497 ADGRA1Q86SQ6 560 aa10.22□□□□□ -0.77
VAPB-206ENST00000520497 CERS5Q8N5B7 392 aa10.22□□□□□ -0.77
VAPB-206ENST00000520497 KCNB2Q92953 911 aa10.22□□□□□ -0.77
VAPB-206ENST00000520497 DBNDD1Q9H9R9 158 aa10.22□□□□□ -0.77
VAPB-206ENST00000520497 RAI14Q9P0K7 980 aa10.22□□□□□ -0.77
VAPB-206ENST00000520497 SUGT1Q9Y2Z0 365 aa10.22□□□□□ -0.77
VAPB-206ENST00000520497 YDJCA8MPS7 323 aa10.21□□□□□ -0.77
VAPB-206ENST00000520497 LDHBP07195 334 aaKnown RBP10.21□□□□□ -0.77
VAPB-206ENST00000520497 HSPD1P10809 573 aaKnown RBP10.21□□□□□ -0.77
VAPB-206ENST00000520497 CYP7A1P22680 504 aa10.21□□□□□ -0.77
VAPB-206ENST00000520497 IARSP41252 1262 aaKnown RBP10.21□□□□□ -0.77
VAPB-206ENST00000520497 ANAPC15P60006 121 aa10.21□□□□□ -0.77
VAPB-206ENST00000520497 FKBP1AP62942 108 aaKnown RBP10.21□□□□□ -0.77
VAPB-206ENST00000520497 NECTIN1Q15223 517 aa10.21□□□□□ -0.77
VAPB-206ENST00000520497 STRIP1Q5VSL9 837 aa10.21□□□□□ -0.77
VAPB-206ENST00000520497 TTLL5Q6EMB2 1281 aa10.21□□□□□ -0.77
VAPB-206ENST00000520497 NAA16Q6N069 864 aaPredicted RBP10.21□□□□□ -0.77
VAPB-206ENST00000520497 IL27Q8NEV9 243 aa10.21□□□□□ -0.77
VAPB-206ENST00000520497 STRBPQ96SI9 672 aaKnown RBP10.21□□□□□ -0.77
VAPB-206ENST00000520497 RIOK1Q9BRS2 568 aaKnown RBP10.21□□□□□ -0.77
VAPB-206ENST00000520497 TAOK3Q9H2K8 898 aa10.21□□□□□ -0.77
VAPB-206ENST00000520497 ZNF277Q9NRM2 450 aaPredicted RBP10.21□□□□□ -0.77
VAPB-206ENST00000520497 PALD1Q9ULE6 856 aa10.21□□□□□ -0.77
VAPB-206ENST00000520497 RBM8AQ9Y5S9 174 aaKnown RBP10.21□□□□□ -0.77
VAPB-206ENST00000520497 ZMYM6O95789 1325 aa10.21□□□□□ -0.78
VAPB-206ENST00000520497 G3V3G9 751 aa10.2□□□□□ -0.78
VAPB-206ENST00000520497 SIPA1L1O43166 1804 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms