RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-208ENST00000520228 UGGT2Q9NYU1 1516 aa10.97□□□□□ -0.65
SDCBP-208ENST00000520228 DISP1Q96F81 1524 aa10.96□□□□□ -0.65
SDCBP-208ENST00000520228 CNTNAP5Q8WYK1 1306 aa10.96□□□□□ -0.65
SDCBP-208ENST00000520228 GNB5O14775 395 aa10.96□□□□□ -0.65
SDCBP-208ENST00000520228 TM4SF5O14894 197 aa10.96□□□□□ -0.65
SDCBP-208ENST00000520228 LDLRAD1Q5T700 205 aa10.96□□□□□ -0.65
SDCBP-208ENST00000520228 MRRFQ96E11 262 aaKnown RBP10.96□□□□□ -0.65
SDCBP-208ENST00000520228 RANGAP1P46060 587 aaPredicted RBP10.95□□□□□ -0.66
SDCBP-208ENST00000520228 RPS26P11Q5JNZ5 115 aaPredicted RBP10.95□□□□□ -0.66
SDCBP-208ENST00000520228 DTHD1Q6ZMT9 781 aa10.95□□□□□ -0.66
SDCBP-208ENST00000520228 MRS2Q9HD23 443 aa10.95□□□□□ -0.66
SDCBP-208ENST00000520228 H3BRJ5 948 aa10.94□□□□□ -0.66
SDCBP-208ENST00000520228 ITGAEP38570 1179 aa10.94□□□□□ -0.66
SDCBP-208ENST00000520228 DMRTC2Q8IXT2 367 aaPredicted RBP10.94□□□□□ -0.66
SDCBP-208ENST00000520228 BEND7Q8N7W2 519 aaPredicted RBP10.94□□□□□ -0.66
SDCBP-208ENST00000520228 CLEC4MQ9H2X3 399 aaPredicted RBP10.94□□□□□ -0.66
SDCBP-208ENST00000520228 ZFYVE1Q9HBF4 777 aa10.94□□□□□ -0.66
SDCBP-208ENST00000520228 VTI1BQ9UEU0 232 aa10.94□□□□□ -0.66
SDCBP-208ENST00000520228 GOLGA3Q08378 1498 aa10.93□□□□□ -0.66
SDCBP-208ENST00000520228 ESRRAP11474 423 aaPredicted RBP10.93□□□□□ -0.66
SDCBP-208ENST00000520228 RBM25P49756 843 aaKnown RBP10.93□□□□□ -0.66
SDCBP-208ENST00000520228 ZNF423Q2M1K9 1284 aa10.93□□□□□ -0.66
SDCBP-208ENST00000520228 CRELD1Q96HD1 420 aa10.93□□□□□ -0.66
SDCBP-208ENST00000520228 PLVAPQ9BX97 442 aa10.93□□□□□ -0.66
SDCBP-208ENST00000520228 PPM1HQ9ULR3 514 aa10.93□□□□□ -0.66
SDCBP-208ENST00000520228 SOX1O00570 391 aaPredicted RBP10.92□□□□□ -0.66
SDCBP-208ENST00000520228 PCDH1Q08174 1060 aa10.92□□□□□ -0.66
SDCBP-208ENST00000520228 FAAP100Q0VG06 881 aa10.92□□□□□ -0.66
SDCBP-208ENST00000520228 SETDB1Q15047 1291 aa10.92□□□□□ -0.66
SDCBP-208ENST00000520228 DTWD1Q8N5C7 304 aa10.92□□□□□ -0.66
SDCBP-208ENST00000520228 BCL11AQ9H165 835 aa10.92□□□□□ -0.66
SDCBP-208ENST00000520228 USP31Q70CQ4 1352 aa10.91□□□□□ -0.66
SDCBP-208ENST00000520228 LINC01387J3KSC0 135 aa10.91□□□□□ -0.66
SDCBP-208ENST00000520228 PIK3R2O00459 728 aa10.91□□□□□ -0.66
SDCBP-208ENST00000520228 DEAF1O75398 565 aaPredicted RBP10.91□□□□□ -0.66
SDCBP-208ENST00000520228 RECKO95980 971 aa10.91□□□□□ -0.66
SDCBP-208ENST00000520228 B3GALT4O96024 378 aa10.91□□□□□ -0.66
SDCBP-208ENST00000520228 CABP4P57796 275 aa10.91□□□□□ -0.66
SDCBP-208ENST00000520228 TXNDC11Q6PKC3 985 aa10.91□□□□□ -0.66
SDCBP-208ENST00000520228 WNT8BQ93098 351 aa10.91□□□□□ -0.66
SDCBP-208ENST00000520228 AKAP2Q9Y2D5 859 aa10.91□□□□□ -0.66
SDCBP-208ENST00000520228 UACAQ9BZF9 1416 aa10.91□□□□□ -0.66
SDCBP-208ENST00000520228 A0A0A0MRY4 1105 aa10.9□□□□□ -0.66
SDCBP-208ENST00000520228 FAM177BA6PVY3 158 aa10.9□□□□□ -0.66
SDCBP-208ENST00000520228 IKBKEQ14164 716 aa10.9□□□□□ -0.66
SDCBP-208ENST00000520228 TRAPPC3LQ5T215 181 aa10.9□□□□□ -0.66
SDCBP-208ENST00000520228 HGSNATQ68CP4 663 aa10.9□□□□□ -0.66
SDCBP-208ENST00000520228 PODNQ7Z5L7 613 aa10.9□□□□□ -0.66
SDCBP-208ENST00000520228 SCARF2Q96GP6 870 aaPredicted RBP10.9□□□□□ -0.66
SDCBP-208ENST00000520228 BACH2Q9BYV9 841 aa10.9□□□□□ -0.66
SDCBP-208ENST00000520228 SOX17Q9H6I2 414 aaPredicted RBP10.9□□□□□ -0.66
SDCBP-208ENST00000520228 SRA1Q9HD15 236 aaKnown RBP10.9□□□□□ -0.66
SDCBP-208ENST00000520228 SEC31BQ9NQW1 1179 aa10.9□□□□□ -0.66
SDCBP-208ENST00000520228 KIF21BO75037 1637 aa10.89□□□□□ -0.67
SDCBP-208ENST00000520228 FSCN2O14926 492 aa10.89□□□□□ -0.67
SDCBP-208ENST00000520228 CDC25BP30305 580 aa10.89□□□□□ -0.67
SDCBP-208ENST00000520228 ST13P50502 369 aaKnown RBP10.89□□□□□ -0.67
SDCBP-208ENST00000520228 PIP4K2BP78356 416 aa10.89□□□□□ -0.67
SDCBP-208ENST00000520228 MEI1Q5TIA1 1274 aa10.89□□□□□ -0.67
SDCBP-208ENST00000520228 MAP4K3Q8IVH8 894 aa10.89□□□□□ -0.67
SDCBP-208ENST00000520228 KIAA0556O60303 1618 aa10.88□□□□□ -0.67
SDCBP-208ENST00000520228 FAM181BA6NEQ2 426 aa10.88□□□□□ -0.67
SDCBP-208ENST00000520228 FBXO11Q86XK2 927 aa10.88□□□□□ -0.67
SDCBP-208ENST00000520228 FMR1NBQ8N0W7 255 aaPredicted RBP10.88□□□□□ -0.67
SDCBP-208ENST00000520228 GALNT11Q8NCW6 608 aa10.88□□□□□ -0.67
SDCBP-208ENST00000520228 OSGEPQ9NPF4 335 aa10.88□□□□□ -0.67
SDCBP-208ENST00000520228 STK17AQ9UEE5 414 aa10.88□□□□□ -0.67
SDCBP-208ENST00000520228 UHRF1BP1LA0JNW5 1464 aa10.87□□□□□ -0.67
SDCBP-208ENST00000520228 TAF1CQ15572 869 aaPredicted RBP10.87□□□□□ -0.67
SDCBP-208ENST00000520228 NECAB3Q96P71 396 aaPredicted RBP10.87□□□□□ -0.67
SDCBP-208ENST00000520228 NOP53Q9NZM5 478 aaKnown RBP10.87□□□□□ -0.67
SDCBP-208ENST00000520228 CTTNBP2Q8WZ74 1663 aa10.86□□□□□ -0.67
SDCBP-208ENST00000520228 ABCC2Q92887 1545 aa10.86□□□□□ -0.67
SDCBP-208ENST00000520228 SPDYE3A6NKU9 549 aa10.86□□□□□ -0.67
SDCBP-208ENST00000520228 COL8A1P27658 744 aa10.86□□□□□ -0.67
SDCBP-208ENST00000520228 FAM117BQ6P1L5 589 aa10.86□□□□□ -0.67
SDCBP-208ENST00000520228 ADCY10Q96PN6 1610 aa10.86□□□□□ -0.67
SDCBP-208ENST00000520228 DLL1O00548 723 aa10.85□□□□□ -0.67
SDCBP-208ENST00000520228 C19orf57Q0VDD7 668 aa10.85□□□□□ -0.67
SDCBP-208ENST00000520228 KLHL23Q8NBE8 558 aa10.85□□□□□ -0.67
SDCBP-208ENST00000520228 KLHDC7BQ96G42 594 aa10.85□□□□□ -0.67
SDCBP-208ENST00000520228 NRSN2Q9GZP1 204 aa10.85□□□□□ -0.67
SDCBP-208ENST00000520228 TTF2Q9UNY4 1162 aaKnown RBP10.85□□□□□ -0.67
SDCBP-208ENST00000520228 PLB1Q6P1J6 1458 aa10.85□□□□□ -0.67
SDCBP-208ENST00000520228 FAM229AH3BQW9 127 aa10.84□□□□□ -0.67
SDCBP-208ENST00000520228 ENC1O14682 589 aa10.84□□□□□ -0.67
SDCBP-208ENST00000520228 FBXO24O75426 580 aa10.84□□□□□ -0.67
SDCBP-208ENST00000520228 RAC1P63000 192 aa10.84□□□□□ -0.67
SDCBP-208ENST00000520228 TSNAXIP1Q2TAA8 658 aa10.84□□□□□ -0.67
SDCBP-208ENST00000520228 TPTE2Q6XPS3 522 aa10.84□□□□□ -0.67
SDCBP-208ENST00000520228 CARD10Q9BWT7 1032 aa10.84□□□□□ -0.67
SDCBP-208ENST00000520228 CEP44Q9C0F1 390 aa10.84□□□□□ -0.67
SDCBP-208ENST00000520228 TMEM39AQ9NV64 488 aa10.84□□□□□ -0.67
SDCBP-208ENST00000520228 TRIM28Q13263 835 aaKnown RBP10.83□□□□□ -0.68
SDCBP-208ENST00000520228 FOXD4L6Q3SYB3 417 aaPredicted RBP10.83□□□□□ -0.68
SDCBP-208ENST00000520228 FOXD4L3Q6VB84 417 aaPredicted RBP10.83□□□□□ -0.68
SDCBP-208ENST00000520228 SV2BQ7L1I2 683 aa10.83□□□□□ -0.68
SDCBP-208ENST00000520228 SLC7A3Q8WY07 619 aa10.83□□□□□ -0.68
SDCBP-208ENST00000520228 TRIM56Q9BRZ2 755 aaKnown RBP10.83□□□□□ -0.68
SDCBP-208ENST00000520228 E9PSI1 815 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms