RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 TEPSINQ96N21 525 aa15.58■□□□□ 0.08
CSMD1-205ENST00000519623 MRIQ9BWK5 157 aa15.58■□□□□ 0.08
CSMD1-205ENST00000519623 CFHR5Q9BXR6 569 aa15.58■□□□□ 0.08
CSMD1-205ENST00000519623 R3HDMLQ9H3Y0 253 aa15.58■□□□□ 0.08
CSMD1-205ENST00000519623 KIF16BQ96L93 1317 aa15.58■□□□□ 0.08
CSMD1-205ENST00000519623 FRAT2O75474 233 aaPredicted RBP15.57■□□□□ 0.08
CSMD1-205ENST00000519623 RARSP54136 660 aaKnown RBP15.57■□□□□ 0.08
CSMD1-205ENST00000519623 INHBEP58166 350 aa15.57■□□□□ 0.08
CSMD1-205ENST00000519623 TNFAIP1Q13829 316 aa15.57■□□□□ 0.08
CSMD1-205ENST00000519623 WNK4Q96J92 1243 aa15.57■□□□□ 0.08
CSMD1-205ENST00000519623 ARAP2Q8WZ64 1704 aa15.57■□□□□ 0.08
CSMD1-205ENST00000519623 MANSC4A6NHS7 340 aaPredicted RBP15.56■□□□□ 0.08
CSMD1-205ENST00000519623 GPR25O00155 361 aa15.56■□□□□ 0.08
CSMD1-205ENST00000519623 IFIT1P09914 478 aaKnown RBP15.56■□□□□ 0.08
CSMD1-205ENST00000519623 UBTFL1P0CB47 393 aaPredicted RBP15.56■□□□□ 0.08
CSMD1-205ENST00000519623 ZBTB48P10074 688 aaPredicted RBP15.56■□□□□ 0.08
CSMD1-205ENST00000519623 IREB2P48200 963 aaKnown RBP15.56■□□□□ 0.08
CSMD1-205ENST00000519623 CDAN1Q8IWY9 1227 aa15.56■□□□□ 0.08
CSMD1-205ENST00000519623 LPIN2Q92539 896 aa15.56■□□□□ 0.08
CSMD1-205ENST00000519623 API5Q9BZZ5 524 aaKnown RBP15.56■□□□□ 0.08
CSMD1-205ENST00000519623 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.56■□□□□ 0.08
CSMD1-205ENST00000519623 TCP10L2B9ZVM9 353 aa15.55■□□□□ 0.08
CSMD1-205ENST00000519623 GJA5P36382 358 aa15.55■□□□□ 0.08
CSMD1-205ENST00000519623 MLLT1Q03111 559 aaPredicted RBP15.55■□□□□ 0.08
CSMD1-205ENST00000519623 IFNL1Q8IU54 200 aa15.55■□□□□ 0.08
CSMD1-205ENST00000519623 ANKRD13AQ8IZ07 590 aa15.55■□□□□ 0.08
CSMD1-205ENST00000519623 ZDHHC15Q96MV8 337 aa15.55■□□□□ 0.08
CSMD1-205ENST00000519623 TMEM39BQ9GZU3 492 aa15.55■□□□□ 0.08
CSMD1-205ENST00000519623 FBXO3Q9UK99 471 aa15.55■□□□□ 0.08
CSMD1-205ENST00000519623 SUGT1Q9Y2Z0 365 aa15.55■□□□□ 0.08
CSMD1-205ENST00000519623 CIAO1O76071 339 aa15.54■□□□□ 0.08
CSMD1-205ENST00000519623 ALDH1A1P00352 501 aa15.54■□□□□ 0.08
CSMD1-205ENST00000519623 SLC5A1P13866 664 aa15.54■□□□□ 0.08
CSMD1-205ENST00000519623 APOBEC3HQ6NTF7 200 aaKnown RBP15.54■□□□□ 0.08
CSMD1-205ENST00000519623 ARHGAP45Q92619 1136 aa15.54■□□□□ 0.08
CSMD1-205ENST00000519623 TEKT1Q969V4 418 aa15.54■□□□□ 0.08
CSMD1-205ENST00000519623 LRRFIP2Q9Y608 721 aaKnown RBP15.54■□□□□ 0.08
CSMD1-205ENST00000519623 IGF2BP3O00425 579 aaKnown RBP eCLIP15.53■□□□□ 0.08
CSMD1-205ENST00000519623 TNNI2P48788 182 aa15.53■□□□□ 0.08
CSMD1-205ENST00000519623 PKN2Q16513 984 aaKnown RBP15.53■□□□□ 0.08
CSMD1-205ENST00000519623 INTS3Q68E01 1043 aaKnown RBP15.53■□□□□ 0.08
CSMD1-205ENST00000519623 HHIPL2Q6UWX4 724 aa15.53■□□□□ 0.08
CSMD1-205ENST00000519623 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.53■□□□□ 0.08
CSMD1-205ENST00000519623 MEIS3Q99687 375 aa15.53■□□□□ 0.08
CSMD1-205ENST00000519623 SIL1Q9H173 461 aa15.53■□□□□ 0.08
CSMD1-205ENST00000519623 CEP126Q9P2H0 1117 aa15.53■□□□□ 0.08
CSMD1-205ENST00000519623 LAMB1P07942 1786 aa15.53■□□□□ 0.08
CSMD1-205ENST00000519623 TESPA1A2RU30 521 aaPredicted RBP15.52■□□□□ 0.08
CSMD1-205ENST00000519623 FKTNO75072 461 aa15.52■□□□□ 0.08
CSMD1-205ENST00000519623 CACNB3P54284 484 aa15.52■□□□□ 0.08
CSMD1-205ENST00000519623 FKBP1CQ5VVH2 108 aa15.52■□□□□ 0.08
CSMD1-205ENST00000519623 WDR66Q8TBY9 1149 aa15.52■□□□□ 0.08
CSMD1-205ENST00000519623 PTPN18Q99952 460 aa15.52■□□□□ 0.08
CSMD1-205ENST00000519623 COPRSQ9NQ92 184 aa15.52■□□□□ 0.08
CSMD1-205ENST00000519623 HPS5Q9UPZ3 1129 aa15.52■□□□□ 0.08
CSMD1-205ENST00000519623 PA2G4Q9UQ80 394 aaKnown RBP15.52■□□□□ 0.08
CSMD1-205ENST00000519623 HDAC5Q9UQL6 1122 aa15.52■□□□□ 0.08
CSMD1-205ENST00000519623 IL15P40933 162 aaPredicted RBP15.51■□□□□ 0.07
CSMD1-205ENST00000519623 MAP3K9P80192 1104 aa15.51■□□□□ 0.07
CSMD1-205ENST00000519623 ATP2B3Q16720 1220 aa15.51■□□□□ 0.07
CSMD1-205ENST00000519623 FAM83AQ86UY5 434 aa15.51■□□□□ 0.07
CSMD1-205ENST00000519623 MS4A4AQ96JQ5 239 aa15.51■□□□□ 0.07
CSMD1-205ENST00000519623 ELP3Q9H9T3 547 aa15.51■□□□□ 0.07
CSMD1-205ENST00000519623 MAST3O60307 1309 aa15.5■□□□□ 0.07
CSMD1-205ENST00000519623 OTOFQ9HC10 1997 aa15.5■□□□□ 0.07
CSMD1-205ENST00000519623 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.5■□□□□ 0.07
CSMD1-205ENST00000519623 CNKSR2Q8WXI2 1034 aa15.5■□□□□ 0.07
CSMD1-205ENST00000519623 OPTNQ96CV9 577 aa15.5■□□□□ 0.07
CSMD1-205ENST00000519623 MYH13Q9UKX3 1938 aa15.49■□□□□ 0.07
CSMD1-205ENST00000519623 ZBTB22O15209 634 aa15.49■□□□□ 0.07
CSMD1-205ENST00000519623 VGLL4Q14135 290 aa15.49■□□□□ 0.07
CSMD1-205ENST00000519623 BCAR3O75815 825 aa15.48■□□□□ 0.07
CSMD1-205ENST00000519623 GNAI3P08754 354 aa15.48■□□□□ 0.07
CSMD1-205ENST00000519623 PHKA1P46020 1223 aa15.48■□□□□ 0.07
CSMD1-205ENST00000519623 SOX10P56693 466 aa15.48■□□□□ 0.07
CSMD1-205ENST00000519623 OTUD7BQ6GQQ9 843 aa15.48■□□□□ 0.07
CSMD1-205ENST00000519623 FBXO46Q6PJ61 603 aaPredicted RBP15.48■□□□□ 0.07
CSMD1-205ENST00000519623 GNL3LQ9NVN8 582 aaKnown RBP15.48■□□□□ 0.07
CSMD1-205ENST00000519623 TMOD2Q9NZR1 351 aa15.48■□□□□ 0.07
CSMD1-205ENST00000519623 TNNQ9UQP3 1299 aa15.48■□□□□ 0.07
CSMD1-205ENST00000519623 DAGLAQ9Y4D2 1042 aa15.48■□□□□ 0.07
CSMD1-205ENST00000519623 TRIM27P14373 513 aa15.47■□□□□ 0.07
CSMD1-205ENST00000519623 PRDX5P30044 214 aa15.47■□□□□ 0.07
CSMD1-205ENST00000519623 ADORA1P30542 326 aa15.47■□□□□ 0.07
CSMD1-205ENST00000519623 TIMM10P62072 90 aa15.47■□□□□ 0.07
CSMD1-205ENST00000519623 CRHR2Q13324 411 aa15.47■□□□□ 0.07
CSMD1-205ENST00000519623 MTX1Q13505 466 aa15.47■□□□□ 0.07
CSMD1-205ENST00000519623 DIXDC1Q155Q3 683 aa15.47■□□□□ 0.07
CSMD1-205ENST00000519623 CDC42EP5Q6NZY7 148 aa15.47■□□□□ 0.07
CSMD1-205ENST00000519623 DENND2AQ9ULE3 1009 aa15.47■□□□□ 0.07
CSMD1-205ENST00000519623 SALL1Q9NSC2 1324 aa15.46■□□□□ 0.07
CSMD1-205ENST00000519623 SEMA3EO15041 775 aa15.46■□□□□ 0.07
CSMD1-205ENST00000519623 IPO8O15397 1037 aaKnown RBP15.46■□□□□ 0.07
CSMD1-205ENST00000519623 SRGAP3O43295 1099 aa15.46■□□□□ 0.07
CSMD1-205ENST00000519623 LDHBP07195 334 aaKnown RBP15.46■□□□□ 0.07
CSMD1-205ENST00000519623 CCDC102BQ68D86 513 aa15.46■□□□□ 0.07
CSMD1-205ENST00000519623 ATF7IPQ6VMQ6 1270 aa15.46■□□□□ 0.07
CSMD1-205ENST00000519623 FAM151AQ8WW52 585 aa15.46■□□□□ 0.07
CSMD1-205ENST00000519623 BRI3BPQ8WY22 251 aa15.46■□□□□ 0.07
CSMD1-205ENST00000519623 ZKSCAN4Q969J2 545 aaPredicted RBP15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms