RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 ST13P50502 369 aaKnown RBP10.44□□□□□ -0.74
PTPN12-213ENST00000519553 NLRP12P59046 1061 aa10.44□□□□□ -0.74
PTPN12-213ENST00000519553 DCAF11Q8TEB1 546 aa10.44□□□□□ -0.74
PTPN12-213ENST00000519553 BCL11AQ9H165 835 aa10.44□□□□□ -0.74
PTPN12-213ENST00000519553 TMEM39AQ9NV64 488 aa10.44□□□□□ -0.74
PTPN12-213ENST00000519553 RBM25P49756 843 aaKnown RBP10.43□□□□□ -0.74
PTPN12-213ENST00000519553 RASSF7Q02833 373 aa10.43□□□□□ -0.74
PTPN12-213ENST00000519553 TAF1CQ15572 869 aaPredicted RBP10.43□□□□□ -0.74
PTPN12-213ENST00000519553 IGF2-ASQ6U949 168 aa10.43□□□□□ -0.74
PTPN12-213ENST00000519553 UBASH3BQ8TF42 649 aa10.43□□□□□ -0.74
PTPN12-213ENST00000519553 BACH2Q9BYV9 841 aa10.43□□□□□ -0.74
PTPN12-213ENST00000519553 CEP44Q9C0F1 390 aa10.43□□□□□ -0.74
PTPN12-213ENST00000519553 PAGE1O75459 146 aa10.42□□□□□ -0.74
PTPN12-213ENST00000519553 STK35Q8TDR2 534 aa10.42□□□□□ -0.74
PTPN12-213ENST00000519553 CTSBP07858 339 aa10.41□□□□□ -0.74
PTPN12-213ENST00000519553 PPP2R3AQ06190 1150 aa10.41□□□□□ -0.74
PTPN12-213ENST00000519553 SV2BQ7L1I2 683 aa10.41□□□□□ -0.74
PTPN12-213ENST00000519553 LENG1Q96BZ8 264 aaPredicted RBP10.41□□□□□ -0.74
PTPN12-213ENST00000519553 LOC100289279A0A1B0GTE1 492 aa10.4□□□□□ -0.74
PTPN12-213ENST00000519553 ECEL1O95672 775 aa10.4□□□□□ -0.74
PTPN12-213ENST00000519553 AP3B2Q13367 1082 aa10.4□□□□□ -0.74
PTPN12-213ENST00000519553 CCDC85BQ15834 202 aaPredicted RBP10.4□□□□□ -0.74
PTPN12-213ENST00000519553 TSNAXIP1Q2TAA8 658 aa10.4□□□□□ -0.74
PTPN12-213ENST00000519553 MRPL18Q9H0U6 180 aaKnown RBP10.4□□□□□ -0.74
PTPN12-213ENST00000519553 EIF4EBP3O60516 100 aaPredicted RBP10.39□□□□□ -0.75
PTPN12-213ENST00000519553 DLGAP3O95886 979 aa10.39□□□□□ -0.75
PTPN12-213ENST00000519553 CHRNA4P43681 627 aa10.39□□□□□ -0.75
PTPN12-213ENST00000519553 KIAA1211Q6ZU35 1233 aa10.39□□□□□ -0.75
PTPN12-213ENST00000519553 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.39□□□□□ -0.75
PTPN12-213ENST00000519553 PDZD3Q86UT5 571 aa10.39□□□□□ -0.75
PTPN12-213ENST00000519553 SULF2Q8IWU5 870 aa10.39□□□□□ -0.75
PTPN12-213ENST00000519553 DDX54Q8TDD1 881 aaKnown RBP10.39□□□□□ -0.75
PTPN12-213ENST00000519553 NACC1Q96RE7 527 aa10.39□□□□□ -0.75
PTPN12-213ENST00000519553 NOC4LQ9BVI4 516 aaKnown RBP10.39□□□□□ -0.75
PTPN12-213ENST00000519553 USP26Q9BXU7 913 aa10.39□□□□□ -0.75
PTPN12-213ENST00000519553 CYP11A1P05108 521 aa10.38□□□□□ -0.75
PTPN12-213ENST00000519553 NME2P22392 152 aa10.38□□□□□ -0.75
PTPN12-213ENST00000519553 MAOBP27338 520 aa10.38□□□□□ -0.75
PTPN12-213ENST00000519553 RASIP1Q5U651 963 aa10.38□□□□□ -0.75
PTPN12-213ENST00000519553 TMEM87AQ8NBN3 555 aa10.38□□□□□ -0.75
PTPN12-213ENST00000519553 APBA3O96018 575 aa10.37□□□□□ -0.75
PTPN12-213ENST00000519553 ITGB2P05107 769 aa10.37□□□□□ -0.75
PTPN12-213ENST00000519553 BMP6P22004 513 aa10.37□□□□□ -0.75
PTPN12-213ENST00000519553 ADGRE1Q14246 886 aa10.37□□□□□ -0.75
PTPN12-213ENST00000519553 POU4F3Q15319 338 aa10.37□□□□□ -0.75
PTPN12-213ENST00000519553 DUOXA2Q1HG44 320 aa10.37□□□□□ -0.75
PTPN12-213ENST00000519553 ACAD11Q709F0 780 aa10.37□□□□□ -0.75
PTPN12-213ENST00000519553 CD163Q86VB7 1156 aa10.37□□□□□ -0.75
PTPN12-213ENST00000519553 TMEM130Q8N3G9 435 aa10.37□□□□□ -0.75
PTPN12-213ENST00000519553 C9orf172C9J069 976 aa10.36□□□□□ -0.75
PTPN12-213ENST00000519553 F8W735 103 aaPredicted RBP10.36□□□□□ -0.75
PTPN12-213ENST00000519553 GSTP1P09211 210 aaKnown RBP10.36□□□□□ -0.75
PTPN12-213ENST00000519553 ZNF252P-AS1Q0IIN9 211 aa10.36□□□□□ -0.75
PTPN12-213ENST00000519553 MBTPS1Q14703 1052 aa10.36□□□□□ -0.75
PTPN12-213ENST00000519553 PCNX4Q63HM2 1172 aa10.36□□□□□ -0.75
PTPN12-213ENST00000519553 USP21Q9UK80 565 aa10.36□□□□□ -0.75
PTPN12-213ENST00000519553 GDF11O95390 407 aa10.35□□□□□ -0.75
PTPN12-213ENST00000519553 ARNTP27540 789 aa10.35□□□□□ -0.75
PTPN12-213ENST00000519553 FANCCQ00597 558 aa10.35□□□□□ -0.75
PTPN12-213ENST00000519553 AGGF1Q8N302 714 aaeCLIP10.35□□□□□ -0.75
PTPN12-213ENST00000519553 CORO1BQ9BR76 489 aa10.35□□□□□ -0.75
PTPN12-213ENST00000519553 C1QTNF9BB2RNN3 333 aa10.34□□□□□ -0.75
PTPN12-213ENST00000519553 ALX3O95076 343 aa10.34□□□□□ -0.75
PTPN12-213ENST00000519553 NRG1Q02297 640 aaPredicted RBP10.34□□□□□ -0.75
PTPN12-213ENST00000519553 Q6ZS46 218 aa10.34□□□□□ -0.75
PTPN12-213ENST00000519553 TMPRSS13Q9BYE2 586 aa10.34□□□□□ -0.75
PTPN12-213ENST00000519553 NOS3P29474 1203 aa10.33□□□□□ -0.76
PTPN12-213ENST00000519553 LIG3P49916 1009 aa10.33□□□□□ -0.76
PTPN12-213ENST00000519553 TTBK2Q6IQ55 1244 aa10.33□□□□□ -0.76
PTPN12-213ENST00000519553 ERMP1Q7Z2K6 904 aa10.33□□□□□ -0.76
PTPN12-213ENST00000519553 GRIN3AQ8TCU5 1115 aa10.33□□□□□ -0.76
PTPN12-213ENST00000519553 RUSC1Q9BVN2 902 aa10.33□□□□□ -0.76
PTPN12-213ENST00000519553 CCDC86Q9H6F5 360 aaKnown RBP10.33□□□□□ -0.76
PTPN12-213ENST00000519553 AKTIPQ9H8T0 292 aa10.33□□□□□ -0.76
PTPN12-213ENST00000519553 CACNA2D2Q9NY47 1150 aa10.33□□□□□ -0.76
PTPN12-213ENST00000519553 SCAMP3O14828 347 aaKnown RBP10.32□□□□□ -0.76
PTPN12-213ENST00000519553 MAP3K11Q16584 847 aa10.32□□□□□ -0.76
PTPN12-213ENST00000519553 PLA2G4EQ3MJ16 856 aa10.32□□□□□ -0.76
PTPN12-213ENST00000519553 TMEM151AQ8N4L1 468 aa10.32□□□□□ -0.76
PTPN12-213ENST00000519553 EMILIN2Q9BXX0 1053 aa10.32□□□□□ -0.76
PTPN12-213ENST00000519553 ZC3H12CQ9C0D7 883 aaKnown RBP10.32□□□□□ -0.76
PTPN12-213ENST00000519553 RNF208Q9H0X6 261 aa10.32□□□□□ -0.76
PTPN12-213ENST00000519553 METTL5Q9NRN9 209 aaKnown RBP10.32□□□□□ -0.76
PTPN12-213ENST00000519553 MEGF11A6BM72 1044 aa10.31□□□□□ -0.76
PTPN12-213ENST00000519553 ZNF76P36508 570 aa10.31□□□□□ -0.76
PTPN12-213ENST00000519553 MPRIPQ6WCQ1 1025 aa10.31□□□□□ -0.76
PTPN12-213ENST00000519553 AGMOQ6ZNB7 445 aa10.31□□□□□ -0.76
PTPN12-213ENST00000519553 WFDC12Q8WWY7 111 aa10.31□□□□□ -0.76
PTPN12-213ENST00000519553 KRT82Q9NSB4 513 aa10.31□□□□□ -0.76
PTPN12-213ENST00000519553 SAMM50Q9Y512 469 aa10.31□□□□□ -0.76
PTPN12-213ENST00000519553 F6X3S4 739 aa10.3□□□□□ -0.76
PTPN12-213ENST00000519553 IREB2P48200 963 aaKnown RBP10.3□□□□□ -0.76
PTPN12-213ENST00000519553 RPS26P62854 115 aaKnown RBP10.3□□□□□ -0.76
PTPN12-213ENST00000519553 MAP1SQ66K74 1059 aaPredicted RBP10.3□□□□□ -0.76
PTPN12-213ENST00000519553 LLGL2Q6P1M3 1020 aa10.3□□□□□ -0.76
PTPN12-213ENST00000519553 TXNRD3Q86VQ6 643 aa10.3□□□□□ -0.76
PTPN12-213ENST00000519553 PHC3Q8NDX5 983 aa10.3□□□□□ -0.76
PTPN12-213ENST00000519553 WDR89Q96FK6 387 aaPredicted RBP10.3□□□□□ -0.76
PTPN12-213ENST00000519553 CBX8Q9HC52 389 aa10.3□□□□□ -0.76
PTPN12-213ENST00000519553 COPRSQ9NQ92 184 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms