RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 NEXMIFQ5QGS0 1516 aa15.5■□□□□ 0.07
PABPC1-208ENST00000519004 GRIN2DO15399 1336 aa15.5■□□□□ 0.07
PABPC1-208ENST00000519004 TUBBP07437 444 aa15.5■□□□□ 0.07
PABPC1-208ENST00000519004 RDXP35241 583 aaKnown RBP15.5■□□□□ 0.07
PABPC1-208ENST00000519004 MRPL12P52815 198 aaKnown RBP15.5■□□□□ 0.07
PABPC1-208ENST00000519004 ATL3Q6DD88 541 aa15.5■□□□□ 0.07
PABPC1-208ENST00000519004 NAA16Q6N069 864 aaPredicted RBP15.5■□□□□ 0.07
PABPC1-208ENST00000519004 ZNF396Q96N95 335 aaPredicted RBP15.5■□□□□ 0.07
PABPC1-208ENST00000519004 ODF2LQ9ULJ1 636 aa15.5■□□□□ 0.07
PABPC1-208ENST00000519004 SLC3A2P08195 630 aaKnown RBP15.49■□□□□ 0.07
PABPC1-208ENST00000519004 TBC1D8BQ0IIM8 1120 aa15.49■□□□□ 0.07
PABPC1-208ENST00000519004 CRYMQ14894 314 aa15.49■□□□□ 0.07
PABPC1-208ENST00000519004 FMNL3Q8IVF7 1028 aa15.49■□□□□ 0.07
PABPC1-208ENST00000519004 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.49■□□□□ 0.07
PABPC1-208ENST00000519004 SMARCC2Q8TAQ2 1214 aa15.49■□□□□ 0.07
PABPC1-208ENST00000519004 BCAS4Q8TDM0 211 aa15.49■□□□□ 0.07
PABPC1-208ENST00000519004 SH3BP1Q9Y3L3 701 aa15.49■□□□□ 0.07
PABPC1-208ENST00000519004 A0A1W2PQ27 194 aa15.49■□□□□ 0.07
PABPC1-208ENST00000519004 A0A1W2PQ64 194 aa15.49■□□□□ 0.07
PABPC1-208ENST00000519004 A0A1W2PQD8 194 aa15.49■□□□□ 0.07
PABPC1-208ENST00000519004 RTN2O75298 545 aa15.49■□□□□ 0.07
PABPC1-208ENST00000519004 FOSBP53539 338 aa15.49■□□□□ 0.07
PABPC1-208ENST00000519004 TUBB2AQ13885 445 aa15.49■□□□□ 0.07
PABPC1-208ENST00000519004 ADALQ6DHV7 355 aa15.49■□□□□ 0.07
PABPC1-208ENST00000519004 PPP1R42Q7Z4L9 355 aa15.49■□□□□ 0.07
PABPC1-208ENST00000519004 ILDR1Q86SU0 546 aaPredicted RBP15.49■□□□□ 0.07
PABPC1-208ENST00000519004 CALR3Q96L12 384 aaKnown RBP15.49■□□□□ 0.07
PABPC1-208ENST00000519004 TUBB2BQ9BVA1 445 aa15.49■□□□□ 0.07
PABPC1-208ENST00000519004 USP44Q9H0E7 712 aa15.49■□□□□ 0.07
PABPC1-208ENST00000519004 CRB1P82279 1406 aa15.49■□□□□ 0.07
PABPC1-208ENST00000519004 TMCO5BA8MYB1 307 aa15.48■□□□□ 0.07
PABPC1-208ENST00000519004 ECM2O94769 699 aaPredicted RBP15.48■□□□□ 0.07
PABPC1-208ENST00000519004 FBLN2P98095 1184 aa15.48■□□□□ 0.07
PABPC1-208ENST00000519004 MTF1Q14872 753 aa15.48■□□□□ 0.07
PABPC1-208ENST00000519004 NOA1Q8NC60 698 aaKnown RBP15.48■□□□□ 0.07
PABPC1-208ENST00000519004 FAM76AQ8TAV0 307 aa15.48■□□□□ 0.07
PABPC1-208ENST00000519004 FANCLQ9NW38 375 aa15.48■□□□□ 0.07
PABPC1-208ENST00000519004 A0A0U1RQJ8 604 aa15.48■□□□□ 0.07
PABPC1-208ENST00000519004 EIF3HO15372 352 aaKnown RBP eCLIP15.48■□□□□ 0.07
PABPC1-208ENST00000519004 ADKP55263 362 aaKnown RBP15.48■□□□□ 0.07
PABPC1-208ENST00000519004 IQCA1Q86XH1 822 aa15.48■□□□□ 0.07
PABPC1-208ENST00000519004 ATRIPQ8WXE1 791 aa15.48■□□□□ 0.07
PABPC1-208ENST00000519004 FAM227BQ96M60 508 aa15.48■□□□□ 0.07
PABPC1-208ENST00000519004 SIL1Q9H173 461 aa15.48■□□□□ 0.07
PABPC1-208ENST00000519004 RABEP2Q9H5N1 569 aa15.48■□□□□ 0.07
PABPC1-208ENST00000519004 ITSN1Q15811 1721 aa15.47■□□□□ 0.07
PABPC1-208ENST00000519004 SHTN1A0MZ66 631 aa15.47■□□□□ 0.07
PABPC1-208ENST00000519004 CTAGE15A4D2H0 777 aa15.47■□□□□ 0.07
PABPC1-208ENST00000519004 ANKRD33BA6NCL7 494 aa15.47■□□□□ 0.07
PABPC1-208ENST00000519004 PFKFB2O60825 505 aa15.47■□□□□ 0.07
PABPC1-208ENST00000519004 CTAGE8P0CG41 777 aa15.47■□□□□ 0.07
PABPC1-208ENST00000519004 MYL5Q02045 173 aa15.47■□□□□ 0.07
PABPC1-208ENST00000519004 CTAGE6Q86UF2 777 aa15.47■□□□□ 0.07
PABPC1-208ENST00000519004 CTAGE4Q8IX94 777 aa15.47■□□□□ 0.07
PABPC1-208ENST00000519004 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.47■□□□□ 0.07
PABPC1-208ENST00000519004 TRIM6Q9C030 488 aaPredicted RBP15.47■□□□□ 0.07
PABPC1-208ENST00000519004 LZTFL1Q9NQ48 299 aa15.47■□□□□ 0.07
PABPC1-208ENST00000519004 GGCXP38435 758 aa15.47■□□□□ 0.07
PABPC1-208ENST00000519004 ATP2B2Q01814 1243 aa15.47■□□□□ 0.07
PABPC1-208ENST00000519004 GRIK3Q13003 919 aa15.47■□□□□ 0.07
PABPC1-208ENST00000519004 FLIIQ13045 1269 aa15.47■□□□□ 0.07
PABPC1-208ENST00000519004 PPFIA1Q13136 1202 aa15.47■□□□□ 0.07
PABPC1-208ENST00000519004 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.47■□□□□ 0.07
PABPC1-208ENST00000519004 PDILTQ8N807 584 aa15.47■□□□□ 0.07
PABPC1-208ENST00000519004 MIS18AQ9NYP9 233 aa15.47■□□□□ 0.07
PABPC1-208ENST00000519004 SAMM50Q9Y512 469 aa15.47■□□□□ 0.07
PABPC1-208ENST00000519004 MINK1Q8N4C8 1332 aaPredicted RBP15.47■□□□□ 0.07
PABPC1-208ENST00000519004 N4BP2Q86UW6 1770 aaPredicted RBP15.47■□□□□ 0.07
PABPC1-208ENST00000519004 AGPSO00116 658 aa15.46■□□□□ 0.07
PABPC1-208ENST00000519004 ZNF202O95125 648 aa15.46■□□□□ 0.07
PABPC1-208ENST00000519004 CCDC175P0C221 793 aa15.46■□□□□ 0.07
PABPC1-208ENST00000519004 UBTFL1P0CB47 393 aaPredicted RBP15.46■□□□□ 0.07
PABPC1-208ENST00000519004 NMIQ13287 307 aaPredicted RBP15.46■□□□□ 0.07
PABPC1-208ENST00000519004 KIF4BQ2VIQ3 1234 aa15.46■□□□□ 0.07
PABPC1-208ENST00000519004 NBPF10Q6P3W6 841 aaKnown RBP15.46■□□□□ 0.07
PABPC1-208ENST00000519004 SNRKQ9NRH2 765 aa15.46■□□□□ 0.07
PABPC1-208ENST00000519004 CABP1Q9NZU7 370 aa15.46■□□□□ 0.07
PABPC1-208ENST00000519004 CCNHP51946 323 aaPredicted RBP15.46■□□□□ 0.07
PABPC1-208ENST00000519004 CAPS2Q9BXY5 557 aa15.46■□□□□ 0.07
PABPC1-208ENST00000519004 KIF5CO60282 957 aa15.45■□□□□ 0.06
PABPC1-208ENST00000519004 STIM1Q13586 685 aa15.45■□□□□ 0.06
PABPC1-208ENST00000519004 WHAMMP3Q1A5X7 153 aa15.45■□□□□ 0.06
PABPC1-208ENST00000519004 COG1Q8WTW3 980 aa15.45■□□□□ 0.06
PABPC1-208ENST00000519004 LMTK2Q8IWU2 1503 aa15.45■□□□□ 0.06
PABPC1-208ENST00000519004 ZNF569Q5MCW4 686 aa15.45■□□□□ 0.06
PABPC1-208ENST00000519004 NUTM2DQ5VT03 806 aaPredicted RBP15.45■□□□□ 0.06
PABPC1-208ENST00000519004 NSUN7Q8NE18 718 aaKnown RBP15.45■□□□□ 0.06
PABPC1-208ENST00000519004 RTEL1Q9NZ71 1219 aa15.45■□□□□ 0.06
PABPC1-208ENST00000519004 ADGRG1Q9Y653 693 aa15.45■□□□□ 0.06
PABPC1-208ENST00000519004 AGLP35573 1532 aa15.45■□□□□ 0.06
PABPC1-208ENST00000519004 ATP7AQ04656 1500 aa15.45■□□□□ 0.06
PABPC1-208ENST00000519004 PTPRMP28827 1452 aa15.44■□□□□ 0.06
PABPC1-208ENST00000519004 CTAGE9A4FU28 777 aa15.44■□□□□ 0.06
PABPC1-208ENST00000519004 GOLGA6CA6NDK9 693 aa15.44■□□□□ 0.06
PABPC1-208ENST00000519004 SOWAHDA6NJG2 315 aa15.44■□□□□ 0.06
PABPC1-208ENST00000519004 GOLGA6DP0CG33 693 aa15.44■□□□□ 0.06
PABPC1-208ENST00000519004 GNGT1P63211 74 aa15.44■□□□□ 0.06
PABPC1-208ENST00000519004 ARHGEF25Q86VW2 580 aa15.44■□□□□ 0.06
PABPC1-208ENST00000519004 TATDN2Q93075 761 aa15.44■□□□□ 0.06
PABPC1-208ENST00000519004 EVI5LQ96CN4 794 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms