RNA–Protein interactions for RNA: ENST00000518842.1

LAMA4-211, Transcript of laminin subunit alpha 4, humanhuman

TSL 3

Gene LAMA4, Length 480 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-211ENST00000518842 SNAP23O00161 211 aa11.33□□□□□ -0.6
LAMA4-211ENST00000518842 CT47B1P0C2W7 299 aaPredicted RBP11.33□□□□□ -0.6
LAMA4-211ENST00000518842 USP17L8P0C7I0 530 aa11.33□□□□□ -0.6
LAMA4-211ENST00000518842 BRPF1P55201 1214 aaPredicted RBP11.33□□□□□ -0.6
LAMA4-211ENST00000518842 DLK2Q6UY11 383 aa11.33□□□□□ -0.6
LAMA4-211ENST00000518842 KRT26Q7Z3Y9 468 aa11.33□□□□□ -0.6
LAMA4-211ENST00000518842 ANKRD44Q8N8A2 993 aa11.33□□□□□ -0.6
LAMA4-211ENST00000518842 CAPNS2Q96L46 248 aa11.33□□□□□ -0.6
LAMA4-211ENST00000518842 ZBED2Q9BTP6 218 aa11.33□□□□□ -0.6
LAMA4-211ENST00000518842 GGA3Q9NZ52 723 aa11.33□□□□□ -0.6
LAMA4-211ENST00000518842 C9orf78Q9NZ63 289 aaPredicted RBP11.33□□□□□ -0.6
LAMA4-211ENST00000518842 ADM5C9JUS6 153 aa11.32□□□□□ -0.6
LAMA4-211ENST00000518842 FOXN1O15353 648 aa11.32□□□□□ -0.6
LAMA4-211ENST00000518842 PDE4AP27815 886 aa11.32□□□□□ -0.6
LAMA4-211ENST00000518842 RBM26Q5T8P6 1007 aaKnown RBP11.32□□□□□ -0.6
LAMA4-211ENST00000518842 ZNF594Q96JF6 807 aaPredicted RBP11.32□□□□□ -0.6
LAMA4-211ENST00000518842 MXD3Q9BW11 206 aa11.32□□□□□ -0.6
LAMA4-211ENST00000518842 NBPF3Q9H094 633 aa11.32□□□□□ -0.6
LAMA4-211ENST00000518842 MYOZ2Q9NPC6 264 aa11.32□□□□□ -0.6
LAMA4-211ENST00000518842 ZNF646O15015 1829 aaPredicted RBP11.32□□□□□ -0.6
LAMA4-211ENST00000518842 PSME4Q14997 1843 aa11.32□□□□□ -0.6
LAMA4-211ENST00000518842 MYO3BQ8WXR4 1341 aa11.32□□□□□ -0.6
LAMA4-211ENST00000518842 PITPNM2Q9BZ72 1349 aa11.32□□□□□ -0.6
LAMA4-211ENST00000518842 TAF5LO75529 589 aa11.31□□□□□ -0.6
LAMA4-211ENST00000518842 ECE1P42892 770 aa11.31□□□□□ -0.6
LAMA4-211ENST00000518842 MMP14P50281 582 aa11.31□□□□□ -0.6
LAMA4-211ENST00000518842 SCARF1Q14162 830 aa11.31□□□□□ -0.6
LAMA4-211ENST00000518842 CCDC57Q2TAC2 916 aa11.31□□□□□ -0.6
LAMA4-211ENST00000518842 CYP4F22Q6NT55 531 aa11.31□□□□□ -0.6
LAMA4-211ENST00000518842 HELBQ8NG08 1087 aaPredicted RBP11.31□□□□□ -0.6
LAMA4-211ENST00000518842 ZBED3Q96IU2 234 aaPredicted RBP11.31□□□□□ -0.6
LAMA4-211ENST00000518842 USP44Q9H0E7 712 aa11.31□□□□□ -0.6
LAMA4-211ENST00000518842 BICC1Q9H694 974 aaKnown RBP11.31□□□□□ -0.6
LAMA4-211ENST00000518842 CD209Q9NNX6 404 aa11.31□□□□□ -0.6
LAMA4-211ENST00000518842 CHMP3Q9Y3E7 222 aa11.31□□□□□ -0.6
LAMA4-211ENST00000518842 IL1R1P14778 569 aa11.3□□□□□ -0.6
LAMA4-211ENST00000518842 KCNJ4P48050 445 aa11.3□□□□□ -0.6
LAMA4-211ENST00000518842 LDHAL6AQ6ZMR3 332 aa11.3□□□□□ -0.6
LAMA4-211ENST00000518842 CERS5Q8N5B7 392 aa11.3□□□□□ -0.6
LAMA4-211ENST00000518842 WNT2BQ93097 391 aa11.3□□□□□ -0.6
LAMA4-211ENST00000518842 DCPSQ96C86 337 aaKnown RBP11.3□□□□□ -0.6
LAMA4-211ENST00000518842 PUS3Q9BZE2 481 aaKnown RBP11.3□□□□□ -0.6
LAMA4-211ENST00000518842 PRDM10Q9NQV6 1147 aa11.3□□□□□ -0.6
LAMA4-211ENST00000518842 SMC4Q9NTJ3 1288 aa11.3□□□□□ -0.6
LAMA4-211ENST00000518842 RIPOR2Q9Y4F9 1068 aa11.3□□□□□ -0.6
LAMA4-211ENST00000518842 HSPA8P11142 646 aaKnown RBP11.29□□□□□ -0.6
LAMA4-211ENST00000518842 MAP2K2P36507 400 aa11.29□□□□□ -0.6
LAMA4-211ENST00000518842 CTCFP49711 727 aaPredicted RBP11.29□□□□□ -0.6
LAMA4-211ENST00000518842 MAP2K1Q02750 393 aaPredicted RBP11.29□□□□□ -0.6
LAMA4-211ENST00000518842 ANGEL2Q5VTE6 544 aaKnown RBP11.29□□□□□ -0.6
LAMA4-211ENST00000518842 TTLL5Q6EMB2 1281 aa11.29□□□□□ -0.6
LAMA4-211ENST00000518842 SULF1Q8IWU6 871 aa11.29□□□□□ -0.6
LAMA4-211ENST00000518842 ZDHHC16Q969W1 377 aa11.29□□□□□ -0.6
LAMA4-211ENST00000518842 CDCA5Q96FF9 252 aa11.29□□□□□ -0.6
LAMA4-211ENST00000518842 ZNF408Q9H9D4 720 aa11.29□□□□□ -0.6
LAMA4-211ENST00000518842 GBA2Q9HCG7 927 aaPredicted RBP11.29□□□□□ -0.6
LAMA4-211ENST00000518842 CNNM1Q9NRU3 951 aa11.29□□□□□ -0.6
LAMA4-211ENST00000518842 TRPM7Q96QT4 1865 aa11.29□□□□□ -0.6
LAMA4-211ENST00000518842 SPEF2Q9C093 1822 aa11.28□□□□□ -0.6
LAMA4-211ENST00000518842 WNT10BO00744 389 aa11.28□□□□□ -0.6
LAMA4-211ENST00000518842 AOC2O75106 756 aa11.28□□□□□ -0.6
LAMA4-211ENST00000518842 RFX5P48382 616 aaPredicted RBP11.28□□□□□ -0.6
LAMA4-211ENST00000518842 RARSP54136 660 aaKnown RBP11.28□□□□□ -0.6
LAMA4-211ENST00000518842 FKBP1AP62942 108 aaKnown RBP11.28□□□□□ -0.6
LAMA4-211ENST00000518842 GTF2IP78347 998 aa11.28□□□□□ -0.6
LAMA4-211ENST00000518842 UBE4AQ14139 1066 aa11.28□□□□□ -0.6
LAMA4-211ENST00000518842 NBPF9Q3BBW0 867 aa11.28□□□□□ -0.6
LAMA4-211ENST00000518842 TAF7LQ5H9L4 462 aa11.28□□□□□ -0.6
LAMA4-211ENST00000518842 VGLL2Q8N8G2 317 aa11.28□□□□□ -0.6
LAMA4-211ENST00000518842 AIDAQ96BJ3 306 aa11.28□□□□□ -0.6
LAMA4-211ENST00000518842 FAM205AQ6ZU69 1335 aa11.28□□□□□ -0.6
LAMA4-211ENST00000518842 A0A1B0GUL6 1792 aa11.27□□□□□ -0.61
LAMA4-211ENST00000518842 FAM155AB1AL88 458 aaPredicted RBP11.27□□□□□ -0.61
LAMA4-211ENST00000518842 HUNKP57058 714 aa11.27□□□□□ -0.61
LAMA4-211ENST00000518842 ZNF804AQ7Z570 1209 aa11.27□□□□□ -0.61
LAMA4-211ENST00000518842 OGFOD1Q8N543 542 aa11.27□□□□□ -0.61
LAMA4-211ENST00000518842 MTMR14Q8NCE2 650 aa11.27□□□□□ -0.61
LAMA4-211ENST00000518842 TDRD7Q8NHU6 1098 aaKnown RBP11.27□□□□□ -0.61
LAMA4-211ENST00000518842 FAM84BQ96KN1 310 aaPredicted RBP11.27□□□□□ -0.61
LAMA4-211ENST00000518842 MROH5Q6ZUA9 1318 aa11.27□□□□□ -0.61
LAMA4-211ENST00000518842 EVI5O60447 810 aa11.26□□□□□ -0.61
LAMA4-211ENST00000518842 SASH1O94885 1247 aa11.26□□□□□ -0.61
LAMA4-211ENST00000518842 FKBP1BP68106 108 aa11.26□□□□□ -0.61
LAMA4-211ENST00000518842 LRRC24Q50LG9 513 aa11.26□□□□□ -0.61
LAMA4-211ENST00000518842 PAXIP1Q6ZW49 1069 aaPredicted RBP11.26□□□□□ -0.61
LAMA4-211ENST00000518842 FBXO33Q7Z6M2 555 aa11.26□□□□□ -0.61
LAMA4-211ENST00000518842 KIAA0825Q8IV33 1275 aa11.26□□□□□ -0.61
LAMA4-211ENST00000518842 TNS4Q8IZW8 715 aa11.26□□□□□ -0.61
LAMA4-211ENST00000518842 C2orf69Q8N8R5 385 aa11.26□□□□□ -0.61
LAMA4-211ENST00000518842 FBXW7Q969H0 707 aa11.26□□□□□ -0.61
LAMA4-211ENST00000518842 ZIC5Q96T25 663 aa11.26□□□□□ -0.61
LAMA4-211ENST00000518842 NOB1Q9ULX3 412 aaKnown RBP11.26□□□□□ -0.61
LAMA4-211ENST00000518842 PLIN1O60240 522 aa11.25□□□□□ -0.61
LAMA4-211ENST00000518842 FGFR2P21802 821 aa11.25□□□□□ -0.61
LAMA4-211ENST00000518842 LBX1P52954 281 aa11.25□□□□□ -0.61
LAMA4-211ENST00000518842 NOGQ13253 232 aa11.25□□□□□ -0.61
LAMA4-211ENST00000518842 RGMBQ6NW40 437 aa11.25□□□□□ -0.61
LAMA4-211ENST00000518842 ARHGAP45Q92619 1136 aa11.25□□□□□ -0.61
LAMA4-211ENST00000518842 IRX2Q9BZI1 471 aaPredicted RBP11.25□□□□□ -0.61
LAMA4-211ENST00000518842 API5Q9BZZ5 524 aaKnown RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms