RNA–Protein interactions for RNA: ENST00000518542.1

CSGALNACT1-206, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 3

Gene CSGALNACT1, Length 895 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-206ENST00000518542 FBXO22Q8NEZ5 403 aa9.42□□□□□ -0.9
CSGALNACT1-206ENST00000518542 TDRD7Q8NHU6 1098 aaKnown RBP9.42□□□□□ -0.9
CSGALNACT1-206ENST00000518542 EAF2Q96CJ1 260 aaPredicted RBP9.42□□□□□ -0.9
CSGALNACT1-206ENST00000518542 CCDC8Q9H0W5 538 aaPredicted RBP9.42□□□□□ -0.9
CSGALNACT1-206ENST00000518542 RRAGCQ9HB90 399 aa9.42□□□□□ -0.9
CSGALNACT1-206ENST00000518542 RYDENQ9NUL5 291 aaKnown RBP9.42□□□□□ -0.9
CSGALNACT1-206ENST00000518542 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.42□□□□□ -0.9
CSGALNACT1-206ENST00000518542 PCNTO95613 3336 aa9.42□□□□□ -0.9
CSGALNACT1-206ENST00000518542 MYO3BQ8WXR4 1341 aa9.41□□□□□ -0.9
CSGALNACT1-206ENST00000518542 SEMA3EO15041 775 aa9.41□□□□□ -0.9
CSGALNACT1-206ENST00000518542 DDNO94850 711 aaPredicted RBP9.41□□□□□ -0.9
CSGALNACT1-206ENST00000518542 IGHDP01880 384 aa9.41□□□□□ -0.9
CSGALNACT1-206ENST00000518542 VIL1P09327 827 aaKnown RBP9.41□□□□□ -0.9
CSGALNACT1-206ENST00000518542 UQCRFS1P1P0C7P4 283 aa9.41□□□□□ -0.9
CSGALNACT1-206ENST00000518542 RPS12P25398 132 aaKnown RBP9.41□□□□□ -0.9
CSGALNACT1-206ENST00000518542 LMOD1P29536 600 aaPredicted RBP9.41□□□□□ -0.9
CSGALNACT1-206ENST00000518542 PHKA1P46020 1223 aa9.41□□□□□ -0.9
CSGALNACT1-206ENST00000518542 TTC39AQ5SRH9 613 aa9.41□□□□□ -0.9
CSGALNACT1-206ENST00000518542 ANKRD45Q5TZF3 282 aa9.41□□□□□ -0.9
CSGALNACT1-206ENST00000518542 CCDC102BQ68D86 513 aa9.41□□□□□ -0.9
CSGALNACT1-206ENST00000518542 TNS4Q8IZW8 715 aa9.41□□□□□ -0.9
CSGALNACT1-206ENST00000518542 DBNDD2Q9BQY9 259 aa9.41□□□□□ -0.9
CSGALNACT1-206ENST00000518542 KCNQ5Q9NR82 932 aa9.41□□□□□ -0.9
CSGALNACT1-206ENST00000518542 DENND2AQ9ULE3 1009 aa9.41□□□□□ -0.9
CSGALNACT1-206ENST00000518542 IQSEC3Q9UPP2 1182 aaPredicted RBP9.41□□□□□ -0.9
CSGALNACT1-206ENST00000518542 SCN4AP35499 1836 aa9.4□□□□□ -0.9
CSGALNACT1-206ENST00000518542 IQCA1LA6NCM1 817 aa9.4□□□□□ -0.9
CSGALNACT1-206ENST00000518542 SMARCA5O60264 1052 aaPredicted RBP9.4□□□□□ -0.9
CSGALNACT1-206ENST00000518542 CHAF1AQ13111 956 aaPredicted RBP9.4□□□□□ -0.9
CSGALNACT1-206ENST00000518542 IER5LQ5T953 404 aa9.4□□□□□ -0.9
CSGALNACT1-206ENST00000518542 RSBN1LQ6PCB5 846 aaPredicted RBP9.4□□□□□ -0.9
CSGALNACT1-206ENST00000518542 SMC5Q8IY18 1101 aa9.4□□□□□ -0.9
CSGALNACT1-206ENST00000518542 C16orf71Q8IYS4 520 aaPredicted RBP9.4□□□□□ -0.9
CSGALNACT1-206ENST00000518542 AGBL3Q8NEM8 1001 aa9.4□□□□□ -0.9
CSGALNACT1-206ENST00000518542 WDR66Q8TBY9 1149 aa9.4□□□□□ -0.9
CSGALNACT1-206ENST00000518542 TBC1D22AQ8WUA7 517 aa9.4□□□□□ -0.9
CSGALNACT1-206ENST00000518542 DPF2Q92785 391 aa9.4□□□□□ -0.9
CSGALNACT1-206ENST00000518542 GPATCH3Q96I76 525 aa9.4□□□□□ -0.9
CSGALNACT1-206ENST00000518542 L3MBTL3Q96JM7 780 aaPredicted RBP9.4□□□□□ -0.9
CSGALNACT1-206ENST00000518542 DBNLQ9UJU6 430 aaKnown RBP9.4□□□□□ -0.9
CSGALNACT1-206ENST00000518542 FAM205AQ6ZU69 1335 aa9.39□□□□□ -0.91
CSGALNACT1-206ENST00000518542 VEGFAP15692 232 aaPredicted RBP9.39□□□□□ -0.91
CSGALNACT1-206ENST00000518542 ARID4AP29374 1257 aaPredicted RBP9.39□□□□□ -0.91
CSGALNACT1-206ENST00000518542 GMPSP49915 693 aaPredicted RBP9.39□□□□□ -0.91
CSGALNACT1-206ENST00000518542 MMP14P50281 582 aa9.39□□□□□ -0.91
CSGALNACT1-206ENST00000518542 FKBP1AP62942 108 aaKnown RBP9.39□□□□□ -0.91
CSGALNACT1-206ENST00000518542 MFSD14BQ5SR56 506 aa9.39□□□□□ -0.91
CSGALNACT1-206ENST00000518542 DACT2Q5SW24 774 aa9.39□□□□□ -0.91
CSGALNACT1-206ENST00000518542 B4GALNT3Q6L9W6 998 aa9.39□□□□□ -0.91
CSGALNACT1-206ENST00000518542 ZGPATQ8N5A5 531 aaKnown RBP9.39□□□□□ -0.91
CSGALNACT1-206ENST00000518542 SLC39A7Q92504 469 aa9.39□□□□□ -0.91
CSGALNACT1-206ENST00000518542 CCDC136Q96JN2 1154 aa9.39□□□□□ -0.91
CSGALNACT1-206ENST00000518542 MS4A4AQ96JQ5 239 aa9.39□□□□□ -0.91
CSGALNACT1-206ENST00000518542 ZNF512BQ96KM6 892 aaPredicted RBP9.39□□□□□ -0.91
CSGALNACT1-206ENST00000518542 TLR7Q9NYK1 1049 aaKnown RBP9.39□□□□□ -0.91
CSGALNACT1-206ENST00000518542 HACL1Q9UJ83 578 aa9.39□□□□□ -0.91
CSGALNACT1-206ENST00000518542 ZNF646O15015 1829 aaPredicted RBP9.39□□□□□ -0.91
CSGALNACT1-206ENST00000518542 PDS5AQ29RF7 1337 aaKnown RBP9.38□□□□□ -0.91
CSGALNACT1-206ENST00000518542 H7C1D1 291 aa9.38□□□□□ -0.91
CSGALNACT1-206ENST00000518542 IRX5P78411 483 aaPredicted RBP9.38□□□□□ -0.91
CSGALNACT1-206ENST00000518542 RASGRF1Q13972 1273 aa9.38□□□□□ -0.91
CSGALNACT1-206ENST00000518542 SPTY2D1Q68D10 685 aaPredicted RBP9.38□□□□□ -0.91
CSGALNACT1-206ENST00000518542 OGFOD1Q8N543 542 aa9.38□□□□□ -0.91
CSGALNACT1-206ENST00000518542 SPATA5Q8NB90 893 aa9.38□□□□□ -0.91
CSGALNACT1-206ENST00000518542 SMC1BQ8NDV3 1235 aa9.38□□□□□ -0.91
CSGALNACT1-206ENST00000518542 GPRC5DQ9NZD1 345 aa9.38□□□□□ -0.91
CSGALNACT1-206ENST00000518542 CNOT7Q9UIV1 285 aaKnown RBP9.38□□□□□ -0.91
CSGALNACT1-206ENST00000518542 HDAC9Q9UKV0 1011 aa9.38□□□□□ -0.91
CSGALNACT1-206ENST00000518542 JAG2Q9Y219 1238 aa9.38□□□□□ -0.91
CSGALNACT1-206ENST00000518542 AKAP11Q9UKA4 1901 aa9.38□□□□□ -0.91
CSGALNACT1-206ENST00000518542 ERC2O15083 957 aa9.37□□□□□ -0.91
CSGALNACT1-206ENST00000518542 USP17L8P0C7I0 530 aa9.37□□□□□ -0.91
CSGALNACT1-206ENST00000518542 HSPA1AP0DMV8 641 aaKnown RBP9.37□□□□□ -0.91
CSGALNACT1-206ENST00000518542 HSPA1BP0DMV9 641 aaKnown RBP9.37□□□□□ -0.91
CSGALNACT1-206ENST00000518542 MCAMP43121 646 aa9.37□□□□□ -0.91
CSGALNACT1-206ENST00000518542 SCNN1DP51172 638 aa9.37□□□□□ -0.91
CSGALNACT1-206ENST00000518542 NUCB1Q02818 461 aa9.37□□□□□ -0.91
CSGALNACT1-206ENST00000518542 CHD1LQ86WJ1 897 aa9.37□□□□□ -0.91
CSGALNACT1-206ENST00000518542 MICALL2Q8IY33 904 aa9.37□□□□□ -0.91
CSGALNACT1-206ENST00000518542 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.37□□□□□ -0.91
CSGALNACT1-206ENST00000518542 MXD3Q9BW11 206 aa9.37□□□□□ -0.91
CSGALNACT1-206ENST00000518542 ECHDC1Q9NTX5 307 aa9.37□□□□□ -0.91
CSGALNACT1-206ENST00000518542 PPP4R2Q9NY27 417 aa9.37□□□□□ -0.91
CSGALNACT1-206ENST00000518542 HMG20BQ9P0W2 317 aa9.37□□□□□ -0.91
CSGALNACT1-206ENST00000518542 SUGT1Q9Y2Z0 365 aa9.37□□□□□ -0.91
CSGALNACT1-206ENST00000518542 MAST3O60307 1309 aa9.36□□□□□ -0.91
CSGALNACT1-206ENST00000518542 TTC41PQ6P2S7 1318 aa9.36□□□□□ -0.91
CSGALNACT1-206ENST00000518542 SALL1Q9NSC2 1324 aa9.36□□□□□ -0.91
CSGALNACT1-206ENST00000518542 LDHBP07195 334 aaKnown RBP9.36□□□□□ -0.91
CSGALNACT1-206ENST00000518542 C7P10643 843 aa9.36□□□□□ -0.91
CSGALNACT1-206ENST00000518542 ATP5JP18859 108 aa9.36□□□□□ -0.91
CSGALNACT1-206ENST00000518542 MX1P20591 662 aa9.36□□□□□ -0.91
CSGALNACT1-206ENST00000518542 EPHX2P34913 555 aa9.36□□□□□ -0.91
CSGALNACT1-206ENST00000518542 EPS15P42566 896 aa9.36□□□□□ -0.91
CSGALNACT1-206ENST00000518542 CENPQQ7L2Z9 268 aaPredicted RBP9.36□□□□□ -0.91
CSGALNACT1-206ENST00000518542 PNMA8AQ86V59 439 aaPredicted RBP9.36□□□□□ -0.91
CSGALNACT1-206ENST00000518542 KIAA0825Q8IV33 1275 aa9.36□□□□□ -0.91
CSGALNACT1-206ENST00000518542 CERS5Q8N5B7 392 aa9.36□□□□□ -0.91
CSGALNACT1-206ENST00000518542 GMLQ99445 158 aa9.36□□□□□ -0.91
CSGALNACT1-206ENST00000518542 LNPKQ9C0E8 428 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms