RNA–Protein interactions for RNA: ENST00000518528.1

PVT1-207, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 624 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-207ENST00000518528 CNKSR2Q8WXI2 1034 aa11.37□□□□□ -0.59
PVT1-207ENST00000518528 SHISA4Q96DD7 197 aa11.37□□□□□ -0.59
PVT1-207ENST00000518528 ARHGAP39Q9C0H5 1083 aa11.37□□□□□ -0.59
PVT1-207ENST00000518528 RNF208Q9H0X6 261 aa11.37□□□□□ -0.59
PVT1-207ENST00000518528 TCP10L2B9ZVM9 353 aa11.36□□□□□ -0.59
PVT1-207ENST00000518528 BTBD19C9JJ37 291 aa11.36□□□□□ -0.59
PVT1-207ENST00000518528 EVI5O60447 810 aa11.36□□□□□ -0.59
PVT1-207ENST00000518528 TAF5LO75529 589 aa11.36□□□□□ -0.59
PVT1-207ENST00000518528 FARP2O94887 1054 aaPredicted RBP11.36□□□□□ -0.59
PVT1-207ENST00000518528 CSF1RP07333 972 aa11.36□□□□□ -0.59
PVT1-207ENST00000518528 CCL5P13501 91 aa11.36□□□□□ -0.59
PVT1-207ENST00000518528 MFSD14BQ5SR56 506 aa11.36□□□□□ -0.59
PVT1-207ENST00000518528 DZIP1LQ8IYY4 767 aaKnown RBP11.36□□□□□ -0.59
PVT1-207ENST00000518528 PRO3102Q9H379 93 aa11.36□□□□□ -0.59
PVT1-207ENST00000518528 TDRD3Q9H7E2 651 aaKnown RBP11.36□□□□□ -0.59
PVT1-207ENST00000518528 TMOD2Q9NZR1 351 aa11.36□□□□□ -0.59
PVT1-207ENST00000518528 TTF2Q9UNY4 1162 aaKnown RBP11.36□□□□□ -0.59
PVT1-207ENST00000518528 JAG2Q9Y219 1238 aa11.36□□□□□ -0.59
PVT1-207ENST00000518528 RIPOR2Q9Y4F9 1068 aa11.36□□□□□ -0.59
PVT1-207ENST00000518528 PPIL2Q13356 520 aa11.35□□□□□ -0.59
PVT1-207ENST00000518528 GCKRQ14397 625 aa11.35□□□□□ -0.59
PVT1-207ENST00000518528 TAF7LQ5H9L4 462 aa11.35□□□□□ -0.59
PVT1-207ENST00000518528 DCAF15Q66K64 600 aa11.35□□□□□ -0.59
PVT1-207ENST00000518528 C8orf58Q8NAV2 365 aa11.35□□□□□ -0.59
PVT1-207ENST00000518528 TEPSINQ96N21 525 aa11.35□□□□□ -0.59
PVT1-207ENST00000518528 WRNIP1Q96S55 665 aa11.35□□□□□ -0.59
PVT1-207ENST00000518528 TMEM39BQ9GZU3 492 aa11.35□□□□□ -0.59
PVT1-207ENST00000518528 CHMP3Q9Y3E7 222 aa11.35□□□□□ -0.59
PVT1-207ENST00000518528 FAM205AQ6ZU69 1335 aa11.35□□□□□ -0.59
PVT1-207ENST00000518528 MYPNQ86TC9 1320 aa11.35□□□□□ -0.59
PVT1-207ENST00000518528 SNAP23O00161 211 aa11.34□□□□□ -0.59
PVT1-207ENST00000518528 OSBPP22059 807 aa11.34□□□□□ -0.59
PVT1-207ENST00000518528 FCGRTP55899 365 aa11.34□□□□□ -0.59
PVT1-207ENST00000518528 C17orf99Q6UX52 265 aa11.34□□□□□ -0.59
PVT1-207ENST00000518528 UBE2Q1Q7Z7E8 422 aa11.34□□□□□ -0.59
PVT1-207ENST00000518528 SLAIN1Q8ND83 568 aa11.34□□□□□ -0.59
PVT1-207ENST00000518528 U2AF1L4Q8WU68 220 aaKnown RBP11.34□□□□□ -0.59
PVT1-207ENST00000518528 CPA4Q9UI42 421 aa11.34□□□□□ -0.59
PVT1-207ENST00000518528 ADAMTS8Q9UP79 889 aa11.34□□□□□ -0.59
PVT1-207ENST00000518528 AOX1Q06278 1338 aa11.34□□□□□ -0.59
PVT1-207ENST00000518528 MYBBP1AQ9BQG0 1328 aaKnown RBP11.34□□□□□ -0.59
PVT1-207ENST00000518528 IRF6O14896 467 aa11.33□□□□□ -0.6
PVT1-207ENST00000518528 PLIN1O60240 522 aa11.33□□□□□ -0.6
PVT1-207ENST00000518528 ECM2O94769 699 aaPredicted RBP11.33□□□□□ -0.6
PVT1-207ENST00000518528 HIBADHP31937 336 aaKnown RBP11.33□□□□□ -0.6
PVT1-207ENST00000518528 CRKP46108 304 aa11.33□□□□□ -0.6
PVT1-207ENST00000518528 PPATQ06203 517 aa11.33□□□□□ -0.6
PVT1-207ENST00000518528 CCDC57Q2TAC2 916 aa11.33□□□□□ -0.6
PVT1-207ENST00000518528 GPR153Q6NV75 609 aa11.33□□□□□ -0.6
PVT1-207ENST00000518528 ANKRD23Q86SG2 305 aa11.33□□□□□ -0.6
PVT1-207ENST00000518528 CNNM1Q9NRU3 951 aa11.33□□□□□ -0.6
PVT1-207ENST00000518528 SNCAIPQ9Y6H5 919 aa11.33□□□□□ -0.6
PVT1-207ENST00000518528 IRS2Q9Y4H2 1338 aa11.33□□□□□ -0.6
PVT1-207ENST00000518528 PDHXO00330 501 aa11.32□□□□□ -0.6
PVT1-207ENST00000518528 SGPL1O95470 568 aa11.32□□□□□ -0.6
PVT1-207ENST00000518528 TFRCP02786 760 aaKnown RBP11.32□□□□□ -0.6
PVT1-207ENST00000518528 HDLBPQ00341 1268 aaKnown RBP11.32□□□□□ -0.6
PVT1-207ENST00000518528 LDHAL6AQ6ZMR3 332 aa11.32□□□□□ -0.6
PVT1-207ENST00000518528 VPS37DQ86XT2 251 aa11.32□□□□□ -0.6
PVT1-207ENST00000518528 CDAN1Q8IWY9 1227 aa11.32□□□□□ -0.6
PVT1-207ENST00000518528 LINS1Q8NG48 757 aa11.32□□□□□ -0.6
PVT1-207ENST00000518528 TDRD7Q8NHU6 1098 aaKnown RBP11.32□□□□□ -0.6
PVT1-207ENST00000518528 PARK7Q99497 189 aaKnown RBP11.32□□□□□ -0.6
PVT1-207ENST00000518528 FRAT2O75474 233 aaPredicted RBP11.31□□□□□ -0.6
PVT1-207ENST00000518528 SLC4A2P04920 1241 aa11.31□□□□□ -0.6
PVT1-207ENST00000518528 UBE4AQ14139 1066 aa11.31□□□□□ -0.6
PVT1-207ENST00000518528 FKBP1CQ5VVH2 108 aa11.31□□□□□ -0.6
PVT1-207ENST00000518528 FAM83AQ86UY5 434 aa11.31□□□□□ -0.6
PVT1-207ENST00000518528 DEFB123Q8N688 67 aa11.31□□□□□ -0.6
PVT1-207ENST00000518528 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.31□□□□□ -0.6
PVT1-207ENST00000518528 TBC1D22AQ8WUA7 517 aa11.31□□□□□ -0.6
PVT1-207ENST00000518528 DNAAF4Q8WXU2 420 aa11.31□□□□□ -0.6
PVT1-207ENST00000518528 ZKSCAN4Q969J2 545 aaPredicted RBP11.31□□□□□ -0.6
PVT1-207ENST00000518528 TEKT1Q969V4 418 aa11.31□□□□□ -0.6
PVT1-207ENST00000518528 LRCH3Q96II8 777 aa11.31□□□□□ -0.6
PVT1-207ENST00000518528 ZNF341Q9BYN7 854 aa11.31□□□□□ -0.6
PVT1-207ENST00000518528 STAP2Q9UGK3 403 aa11.31□□□□□ -0.6
PVT1-207ENST00000518528 SOX1O00570 391 aaPredicted RBP11.3□□□□□ -0.6
PVT1-207ENST00000518528 APAF1O14727 1248 aa11.3□□□□□ -0.6
PVT1-207ENST00000518528 CASP7P55210 303 aa11.3□□□□□ -0.6
PVT1-207ENST00000518528 PRKCZQ05513 592 aa11.3□□□□□ -0.6
PVT1-207ENST00000518528 FKBP5Q13451 457 aaPredicted RBP11.3□□□□□ -0.6
PVT1-207ENST00000518528 UNC93B1Q9H1C4 597 aa11.3□□□□□ -0.6
PVT1-207ENST00000518528 STXBP5LQ9Y2K9 1186 aa11.3□□□□□ -0.6
PVT1-207ENST00000518528 CENPFP49454 3210 aa11.3□□□□□ -0.6
PVT1-207ENST00000518528 ADCY3O60266 1144 aa11.29□□□□□ -0.6
PVT1-207ENST00000518528 BMP8BP34820 402 aa11.29□□□□□ -0.6
PVT1-207ENST00000518528 FLIIQ13045 1269 aa11.29□□□□□ -0.6
PVT1-207ENST00000518528 NECAB2Q7Z6G3 386 aa11.29□□□□□ -0.6
PVT1-207ENST00000518528 TSPYL6Q8N831 410 aa11.29□□□□□ -0.6
PVT1-207ENST00000518528 MRIQ9BWK5 157 aa11.29□□□□□ -0.6
PVT1-207ENST00000518528 MAST3O60307 1309 aa11.29□□□□□ -0.6
PVT1-207ENST00000518528 A0A0C4DFX4 3053 aa11.29□□□□□ -0.6
PVT1-207ENST00000518528 CTGFP29279 349 aa11.28□□□□□ -0.6
PVT1-207ENST00000518528 GYG1P46976 350 aa11.28□□□□□ -0.6
PVT1-207ENST00000518528 CACNB3P54284 484 aa11.28□□□□□ -0.6
PVT1-207ENST00000518528 CHAF1AQ13111 956 aaPredicted RBP11.28□□□□□ -0.6
PVT1-207ENST00000518528 TWISTNBQ3B726 338 aaPredicted RBP11.28□□□□□ -0.6
PVT1-207ENST00000518528 CAVIN4Q5BKX8 364 aa11.28□□□□□ -0.6
PVT1-207ENST00000518528 LMBR1LQ6UX01 489 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms