RNA–Protein interactions for RNA: ENST00000516699.1

RNU4ATAC3P-201, Transcript of RNA, U4atac small nuclear 3, pseudogene, humanhuman

BASIC

Gene RNU4ATAC3P, Length 126 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC3P-201ENST00000516699 UBXN4Q92575 508 aa3.89□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 ZNF592Q92610 1267 aa3.89□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 SMARCE1Q969G3 411 aa3.89□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 AK7Q96M32 723 aa3.89□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 ZNF830Q96NB3 372 aaPredicted RBP3.89□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 NACAP1Q9BZK3 213 aa3.89□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 KRT23Q9C075 422 aa3.89□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 GBP3Q9H0R5 595 aa3.89□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 RNF41Q9H4P4 317 aaPredicted RBP3.89□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 C19orf44Q9H6X5 657 aa3.89□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 L2HGDHQ9H9P8 463 aa3.89□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 BRMS1Q9HCU9 246 aa3.89□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 TFIP11Q9UBB9 837 aaKnown RBP3.89□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 DDX41Q9UJV9 622 aaKnown RBP3.89□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 NAP1L2Q9ULW6 460 aaPredicted RBP3.89□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 ANGEL1Q9UNK9 670 aaKnown RBP3.89□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 CHMP3Q9Y3E7 222 aa3.89□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 RREB1Q92766 1687 aa3.89□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 MYH13Q9UKX3 1938 aa3.89□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 NWD2Q9ULI1 1742 aa3.89□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 MEGF6O75095 1541 aa3.89□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 MAST3O60307 1309 aa3.89□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 RTL9Q8NET4 1388 aa3.89□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 CICQ96RK0 1608 aaPredicted RBP3.88□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 TNS2Q63HR2 1409 aa3.88□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 MYO5AQ9Y4I1 1855 aaKnown RBP3.88□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 AKAP11Q9UKA4 1901 aa3.88□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 ABCA3Q99758 1704 aa3.88□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 SHANK3Q9BYB0 1731 aa3.88□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 FAM237AA0A1B0GTK4 181 aa3.88□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 A0A1B0GUL7 405 aa3.88□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 ZBTB7CA1YPR0 619 aa3.88□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 H7C1W4 665 aa3.88□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 GOLIM4O00461 696 aa3.88□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 SEMA3EO15041 775 aa3.88□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 PRC1O43663 620 aa3.88□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 STX10O60499 249 aa3.88□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 JAK2O60674 1132 aa3.88□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 ZNF202O95125 648 aa3.88□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 TOP1P11387 765 aaKnown RBP3.88□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 MYL6BP14649 208 aa3.88□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 CDK11BP21127 795 aaKnown RBP3.88□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 ERCC5P28715 1186 aaPredicted RBP3.88□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 PDIA3P30101 505 aaKnown RBP3.88□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 SYKP43405 635 aa3.88□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 RFX5P48382 616 aaPredicted RBP3.88□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 METAP2P50579 478 aaKnown RBP eCLIP3.88□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 ETF1P62495 437 aaKnown RBP3.88□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 CBX1P83916 185 aa3.88□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 CCZ1BP86790 482 aa3.88□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 CCZ1P86791 482 aaPredicted RBP3.88□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 SPAG1Q07617 926 aa3.88□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 IFIT5Q13325 482 aaKnown RBP3.88□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 SLC39A14Q15043 492 aa3.88□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 PDIA6Q15084 440 aa3.88□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 WASHC4Q2M389 1173 aa3.88□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 PROSER3Q2NL68 480 aa3.88□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 CFAP100Q494V2 611 aa3.88□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 FILIP1LQ4L180 1135 aa3.88□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 CCDC102BQ68D86 513 aa3.88□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 IQCEQ6IPM2 695 aa3.88□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 LMBR1LQ6UX01 489 aa3.88□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 DDX46Q7L014 1031 aaKnown RBP3.88□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 KRT28Q7Z3Y7 464 aa3.88□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 DHX40Q8IX18 779 aaKnown RBP3.88□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 FAM177A1Q8N128 213 aaPredicted RBP3.88□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 TXLNBQ8N3L3 684 aa3.88□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 MSL3Q8N5Y2 521 aaKnown RBP3.88□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 GOLGA6L1Q8N7Z2 621 aa3.88□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 ZNF579Q8NAF0 562 aaKnown RBP3.88□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 MLKLQ8NB16 471 aa3.88□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 CACTINQ8WUQ7 758 aaKnown RBP3.88□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 ERCC4Q92889 916 aaPredicted RBP3.88□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 IQCDQ96DY2 449 aa3.88□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 CCDC51Q96ER9 411 aa3.88□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 KAZALD1Q96I82 304 aa3.88□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 CHAMP1Q96JM3 812 aa3.88□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 PGBD1Q96JS3 809 aa3.88□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 NEUROD6Q96NK8 337 aa3.88□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 USP28Q96RU2 1077 aa3.88□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 DBNDD2Q9BQY9 259 aa3.88□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 PLA2G12BQ9BX93 195 aa3.88□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 EIF4ENIF1Q9NRA8 985 aaKnown RBP3.88□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 NLRP2Q9NX02 1062 aa3.88□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 TLR7Q9NYK1 1049 aaKnown RBP3.88□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 MYO1AQ9UBC5 1043 aa3.88□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 ORC3Q9UBD5 711 aaPredicted RBP3.88□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 KCPQ6ZWJ8 1503 aa3.88□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 LAMB1P07942 1786 aa3.88□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 MAST2Q6P0Q8 1798 aa3.88□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 DLEC1Q9Y238 1755 aa3.88□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 WDR17Q8IZU2 1322 aa3.88□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 CDHR2Q9BYE9 1310 aa3.88□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 KIAA1551Q9HCM1 1747 aa3.87□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 NUP98P52948 1817 aa3.87□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 WNK3Q9BYP7 1800 aa3.87□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 KLF18A0A0U1RQI7 1052 aa3.87□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 ZBTB43O43298 467 aa3.87□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 STARD3NLO95772 234 aa3.87□□□□□ -1.79
RNU4ATAC3P-201ENST00000516699 ANXA1P04083 346 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms