RNA–Protein interactions for RNA: ENST00000516595.1

SCARNA16.3-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 184 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.3-201ENST00000516595 LTV1Q96GA3 475 aaPredicted RBP2.88□□□□□ -1.95
SCARNA16.3-201ENST00000516595 IRX2Q9BZI1 471 aaPredicted RBP2.88□□□□□ -1.95
SCARNA16.3-201ENST00000516595 SEPT3Q9UH03 358 aa2.88□□□□□ -1.95
SCARNA16.3-201ENST00000516595 ADAMTS8Q9UP79 889 aa2.88□□□□□ -1.95
SCARNA16.3-201ENST00000516595 SPG7Q9UQ90 795 aa2.88□□□□□ -1.95
SCARNA16.3-201ENST00000516595 EP400Q96L91 3159 aa2.88□□□□□ -1.95
SCARNA16.3-201ENST00000516595 MAPK8IP3Q9UPT6 1336 aa2.88□□□□□ -1.95
SCARNA16.3-201ENST00000516595 RGPD2P0DJD1 1756 aa2.87□□□□□ -1.95
SCARNA16.3-201ENST00000516595 KDM6AO15550 1401 aaPredicted RBP2.87□□□□□ -1.95
SCARNA16.3-201ENST00000516595 CICQ96RK0 1608 aaPredicted RBP2.87□□□□□ -1.95
SCARNA16.3-201ENST00000516595 TTLL8A6PVC2 850 aa2.87□□□□□ -1.95
SCARNA16.3-201ENST00000516595 EXOC5O00471 708 aa2.87□□□□□ -1.95
SCARNA16.3-201ENST00000516595 CYP27B1O15528 508 aa2.87□□□□□ -1.95
SCARNA16.3-201ENST00000516595 SPINT1O43278 529 aa2.87□□□□□ -1.95
SCARNA16.3-201ENST00000516595 MAN1A2O60476 641 aa2.87□□□□□ -1.95
SCARNA16.3-201ENST00000516595 HMOX1P09601 288 aa2.87□□□□□ -1.95
SCARNA16.3-201ENST00000516595 RHOQP17081 205 aa2.87□□□□□ -1.95
SCARNA16.3-201ENST00000516595 PLA2G4AP47712 749 aa2.87□□□□□ -1.95
SCARNA16.3-201ENST00000516595 RNF144AP50876 292 aaPredicted RBP2.87□□□□□ -1.95
SCARNA16.3-201ENST00000516595 CALD1Q05682 793 aaKnown RBP2.87□□□□□ -1.95
SCARNA16.3-201ENST00000516595 FKBP5Q13451 457 aaPredicted RBP2.87□□□□□ -1.95
SCARNA16.3-201ENST00000516595 CNGB1Q14028 1251 aaPredicted RBP2.87□□□□□ -1.95
SCARNA16.3-201ENST00000516595 NFE2L2Q16236 605 aa2.87□□□□□ -1.95
SCARNA16.3-201ENST00000516595 MTHFSDQ2M296 383 aaKnown RBP2.87□□□□□ -1.95
SCARNA16.3-201ENST00000516595 PHLDB3Q6NSJ2 640 aa2.87□□□□□ -1.95
SCARNA16.3-201ENST00000516595 ZNF530Q6P9A1 599 aaPredicted RBP2.87□□□□□ -1.95
SCARNA16.3-201ENST00000516595 CAPN12Q6ZSI9 719 aa2.87□□□□□ -1.95
SCARNA16.3-201ENST00000516595 TAS1R3Q7RTX0 852 aa2.87□□□□□ -1.95
SCARNA16.3-201ENST00000516595 USHBP1Q8N6Y0 703 aa2.87□□□□□ -1.95
SCARNA16.3-201ENST00000516595 RHBDD1Q8TEB9 315 aa2.87□□□□□ -1.95
SCARNA16.3-201ENST00000516595 GTF3C2Q8WUA4 911 aaPredicted RBP2.87□□□□□ -1.95
SCARNA16.3-201ENST00000516595 DCAF5Q96JK2 942 aa2.87□□□□□ -1.95
SCARNA16.3-201ENST00000516595 ZFP42Q96MM3 310 aa2.87□□□□□ -1.95
SCARNA16.3-201ENST00000516595 GAS2L1Q99501 681 aaPredicted RBP2.87□□□□□ -1.95
SCARNA16.3-201ENST00000516595 GRIP2Q9C0E4 1043 aa2.87□□□□□ -1.95
SCARNA16.3-201ENST00000516595 TIMMDC1Q9NPL8 285 aa2.87□□□□□ -1.95
SCARNA16.3-201ENST00000516595 BABAM1Q9NWV8 329 aa2.87□□□□□ -1.95
SCARNA16.3-201ENST00000516595 CCDC9Q9Y3X0 531 aaKnown RBP2.87□□□□□ -1.95
SCARNA16.3-201ENST00000516595 GJA3Q9Y6H8 435 aa2.87□□□□□ -1.95
SCARNA16.3-201ENST00000516595 NHSQ6T4R5 1651 aa2.87□□□□□ -1.95
SCARNA16.3-201ENST00000516595 IL16Q14005 1332 aa2.87□□□□□ -1.95
SCARNA16.3-201ENST00000516595 ZNF521Q96K83 1311 aa2.87□□□□□ -1.95
SCARNA16.3-201ENST00000516595 RGPD3A6NKT7 1758 aaPredicted RBP2.87□□□□□ -1.95
SCARNA16.3-201ENST00000516595 RGPD4Q7Z3J3 1758 aa2.87□□□□□ -1.95
SCARNA16.3-201ENST00000516595 PAPPAQ13219 1627 aa2.86□□□□□ -1.95
SCARNA16.3-201ENST00000516595 ZNF831Q5JPB2 1677 aa2.86□□□□□ -1.95
SCARNA16.3-201ENST00000516595 TOGARAM1Q9Y4F4 1720 aa2.86□□□□□ -1.95
SCARNA16.3-201ENST00000516595 GNAT3A8MTJ3 354 aa2.86□□□□□ -1.95
SCARNA16.3-201ENST00000516595 ERVV-2B6SEH9 535 aa2.86□□□□□ -1.95
SCARNA16.3-201ENST00000516595 RNMTO43148 476 aaKnown RBP2.86□□□□□ -1.95
SCARNA16.3-201ENST00000516595 C21orf2O43822 256 aa2.86□□□□□ -1.95
SCARNA16.3-201ENST00000516595 AVPP01185 164 aa2.86□□□□□ -1.95
SCARNA16.3-201ENST00000516595 HMGB2P26583 209 aaKnown RBP2.86□□□□□ -1.95
SCARNA16.3-201ENST00000516595 GPC1P35052 558 aa2.86□□□□□ -1.95
SCARNA16.3-201ENST00000516595 TMPOP42166 694 aaKnown RBP2.86□□□□□ -1.95
SCARNA16.3-201ENST00000516595 SERPINB4P48594 390 aa2.86□□□□□ -1.95
SCARNA16.3-201ENST00000516595 PSMA6P60900 246 aaKnown RBP2.86□□□□□ -1.95
SCARNA16.3-201ENST00000516595 FOXK2Q01167 660 aa2.86□□□□□ -1.95
SCARNA16.3-201ENST00000516595 FKBP4Q02790 459 aaKnown RBP eCLIP2.86□□□□□ -1.95
SCARNA16.3-201ENST00000516595 PDE3BQ13370 1112 aa2.86□□□□□ -1.95
SCARNA16.3-201ENST00000516595 ZNF211Q13398 564 aaPredicted RBP2.86□□□□□ -1.95
SCARNA16.3-201ENST00000516595 MTFR1Q15390 333 aa2.86□□□□□ -1.95
SCARNA16.3-201ENST00000516595 TEAD4Q15561 434 aa2.86□□□□□ -1.95
SCARNA16.3-201ENST00000516595 OCLNQ16625 522 aa2.86□□□□□ -1.95
SCARNA16.3-201ENST00000516595 C1orf141Q5JVX7 400 aa2.86□□□□□ -1.95
SCARNA16.3-201ENST00000516595 Q6ZNB5 142 aa2.86□□□□□ -1.95
SCARNA16.3-201ENST00000516595 FAM196AQ6ZSG2 479 aa2.86□□□□□ -1.95
SCARNA16.3-201ENST00000516595 KRT27Q7Z3Y8 459 aa2.86□□□□□ -1.95
SCARNA16.3-201ENST00000516595 GLYCTKQ8IVS8 523 aa2.86□□□□□ -1.95
SCARNA16.3-201ENST00000516595 ALDH16A1Q8IZ83 802 aa2.86□□□□□ -1.95
SCARNA16.3-201ENST00000516595 PGBD3Q8N328 593 aa2.86□□□□□ -1.95
SCARNA16.3-201ENST00000516595 MARCH10Q8NA82 808 aaPredicted RBP2.86□□□□□ -1.95
SCARNA16.3-201ENST00000516595 TTC16Q8NEE8 873 aa2.86□□□□□ -1.95
SCARNA16.3-201ENST00000516595 PHACTR3Q96KR7 559 aa2.86□□□□□ -1.95
SCARNA16.3-201ENST00000516595 C2orf49Q9BVC5 232 aaPredicted RBP2.86□□□□□ -1.95
SCARNA16.3-201ENST00000516595 SLC52A2Q9HAB3 445 aa2.86□□□□□ -1.95
SCARNA16.3-201ENST00000516595 USP35Q9P2H5 1018 aa2.86□□□□□ -1.95
SCARNA16.3-201ENST00000516595 USP3Q9Y6I4 520 aa2.86□□□□□ -1.95
SCARNA16.3-201ENST00000516595 SOS1Q07889 1333 aaPredicted RBP2.86□□□□□ -1.95
SCARNA16.3-201ENST00000516595 ZBED9Q6R2W3 1325 aa2.86□□□□□ -1.95
SCARNA16.3-201ENST00000516595 DOT1LQ8TEK3 1739 aa2.85□□□□□ -1.95
SCARNA16.3-201ENST00000516595 SIPA1L3O60292 1781 aaPredicted RBP2.85□□□□□ -1.95
SCARNA16.3-201ENST00000516595 SCN11AQ9UI33 1791 aa2.85□□□□□ -1.95
SCARNA16.3-201ENST00000516595 KCPQ6ZWJ8 1503 aa2.85□□□□□ -1.95
SCARNA16.3-201ENST00000516595 H3BRB1 525 aa2.85□□□□□ -1.95
SCARNA16.3-201ENST00000516595 APAF1O14727 1248 aa2.85□□□□□ -1.95
SCARNA16.3-201ENST00000516595 ST8SIA5O15466 376 aa2.85□□□□□ -1.95
SCARNA16.3-201ENST00000516595 FAM13AO94988 1023 aa2.85□□□□□ -1.95
SCARNA16.3-201ENST00000516595 HOXB7P09629 217 aa2.85□□□□□ -1.95
SCARNA16.3-201ENST00000516595 ZNF853P0CG23 659 aa2.85□□□□□ -1.95
SCARNA16.3-201ENST00000516595 BRD2P25440 801 aaKnown RBP2.85□□□□□ -1.95
SCARNA16.3-201ENST00000516595 EPHA4P54764 986 aa2.85□□□□□ -1.95
SCARNA16.3-201ENST00000516595 DGKZQ13574 1117 aa2.85□□□□□ -1.95
SCARNA16.3-201ENST00000516595 MTMR3Q13615 1198 aa2.85□□□□□ -1.95
SCARNA16.3-201ENST00000516595 ZNF800Q2TB10 664 aaPredicted RBP eCLIP2.85□□□□□ -1.95
SCARNA16.3-201ENST00000516595 C11orf91Q3C1V1 193 aa2.85□□□□□ -1.95
SCARNA16.3-201ENST00000516595 C4orf17Q53FE4 359 aa2.85□□□□□ -1.95
SCARNA16.3-201ENST00000516595 SH3PXD2AQ5TCZ1 1133 aa2.85□□□□□ -1.95
SCARNA16.3-201ENST00000516595 C16orf46Q6P387 395 aa2.85□□□□□ -1.95
SCARNA16.3-201ENST00000516595 NBPF10Q6P3W6 841 aaKnown RBP2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms