RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 CCDC39Q9UFE4 941 aa6.29□□□□□ -1.4
HERC4-215ENST00000515753 ARID1BQ8NFD5 2236 aaPredicted RBP6.28□□□□□ -1.4
HERC4-215ENST00000515753 CARNS1A5YM72 827 aa6.28□□□□□ -1.4
HERC4-215ENST00000515753 TBC1D32Q96NH3 1257 aa6.28□□□□□ -1.4
HERC4-215ENST00000515753 CCDC87Q9NVE4 849 aa6.28□□□□□ -1.4
HERC4-215ENST00000515753 AMOTL2Q9Y2J4 779 aa6.28□□□□□ -1.4
HERC4-215ENST00000515753 FAM170BA6NMN3 283 aa6.27□□□□□ -1.41
HERC4-215ENST00000515753 CYP26A1O43174 497 aa6.27□□□□□ -1.41
HERC4-215ENST00000515753 FZD6O60353 706 aa6.27□□□□□ -1.41
HERC4-215ENST00000515753 CTSBP07858 339 aa6.27□□□□□ -1.41
HERC4-215ENST00000515753 SOX4Q06945 474 aaPredicted RBP6.27□□□□□ -1.41
HERC4-215ENST00000515753 NFXL1Q6ZNB6 911 aa6.27□□□□□ -1.41
HERC4-215ENST00000515753 SOX17Q9H6I2 414 aaPredicted RBP6.27□□□□□ -1.41
HERC4-215ENST00000515753 SPRED3Q2MJR0 410 aa6.26□□□□□ -1.41
HERC4-215ENST00000515753 TP53INP2Q8IXH6 220 aa6.26□□□□□ -1.41
HERC4-215ENST00000515753 ZFYVE28Q9HCC9 887 aa6.26□□□□□ -1.41
HERC4-215ENST00000515753 PRKAG2Q9UGJ0 569 aa6.26□□□□□ -1.41
HERC4-215ENST00000515753 MTMR7Q9Y216 660 aa6.26□□□□□ -1.41
HERC4-215ENST00000515753 FAM13AO94988 1023 aa6.25□□□□□ -1.41
HERC4-215ENST00000515753 ABL1P00519 1130 aa6.25□□□□□ -1.41
HERC4-215ENST00000515753 NFICP08651 508 aa6.25□□□□□ -1.41
HERC4-215ENST00000515753 ADH5P11766 374 aa6.25□□□□□ -1.41
HERC4-215ENST00000515753 NPR3P17342 541 aa6.25□□□□□ -1.41
HERC4-215ENST00000515753 RAB6AP20340 208 aa6.25□□□□□ -1.41
HERC4-215ENST00000515753 MAOBP27338 520 aa6.25□□□□□ -1.41
HERC4-215ENST00000515753 EHHADHQ08426 723 aa6.25□□□□□ -1.41
HERC4-215ENST00000515753 ZNF423Q2M1K9 1284 aa6.25□□□□□ -1.41
HERC4-215ENST00000515753 ZAR1Q86SH2 424 aa6.25□□□□□ -1.41
HERC4-215ENST00000515753 NRSN2Q9GZP1 204 aa6.25□□□□□ -1.41
HERC4-215ENST00000515753 LRRC4CQ9HCJ2 640 aa6.25□□□□□ -1.41
HERC4-215ENST00000515753 ACTL7BQ9Y614 415 aa6.25□□□□□ -1.41
HERC4-215ENST00000515753 A0A096LPE4 126 aa6.24□□□□□ -1.41
HERC4-215ENST00000515753 A0A1W2PPZ6 126 aa6.24□□□□□ -1.41
HERC4-215ENST00000515753 ECEL1O95672 775 aa6.24□□□□□ -1.41
HERC4-215ENST00000515753 USP5P45974 858 aa6.24□□□□□ -1.41
HERC4-215ENST00000515753 GRIA4P48058 902 aa6.24□□□□□ -1.41
HERC4-215ENST00000515753 PCDH1Q08174 1060 aa6.24□□□□□ -1.41
HERC4-215ENST00000515753 ZNF211Q13398 564 aaPredicted RBP6.24□□□□□ -1.41
HERC4-215ENST00000515753 AKAP4Q5JQC9 854 aa6.24□□□□□ -1.41
HERC4-215ENST00000515753 DYMQ7RTS9 669 aa6.24□□□□□ -1.41
HERC4-215ENST00000515753 EZH1Q92800 747 aaPredicted RBP6.24□□□□□ -1.41
HERC4-215ENST00000515753 GATA6Q92908 595 aa6.24□□□□□ -1.41
HERC4-215ENST00000515753 METTL22Q9BUU2 404 aaPredicted RBP6.24□□□□□ -1.41
HERC4-215ENST00000515753 EGFL7Q9UHF1 273 aa6.24□□□□□ -1.41
HERC4-215ENST00000515753 A0A1W2PP55 124 aa6.23□□□□□ -1.41
HERC4-215ENST00000515753 PRNPP04156 253 aa6.23□□□□□ -1.41
HERC4-215ENST00000515753 FKBP4Q02790 459 aaKnown RBP eCLIP6.23□□□□□ -1.41
HERC4-215ENST00000515753 COL19A1Q14993 1142 aa6.23□□□□□ -1.41
HERC4-215ENST00000515753 VSIG10LQ86VR7 867 aa6.23□□□□□ -1.41
HERC4-215ENST00000515753 GJD3Q8N144 294 aa6.23□□□□□ -1.41
HERC4-215ENST00000515753 YIPF2Q9BWQ6 316 aa6.23□□□□□ -1.41
HERC4-215ENST00000515753 CLEC4MQ9H2X3 399 aaPredicted RBP6.23□□□□□ -1.41
HERC4-215ENST00000515753 LGR6Q9HBX8 967 aa6.23□□□□□ -1.41
HERC4-215ENST00000515753 SF3B2Q13435 895 aaKnown RBP6.22□□□□□ -1.41
HERC4-215ENST00000515753 POU4F3Q15319 338 aa6.22□□□□□ -1.41
HERC4-215ENST00000515753 CPSF6Q16630 551 aaKnown RBP eCLIP6.22□□□□□ -1.41
HERC4-215ENST00000515753 USPL1Q5W0Q7 1092 aa6.22□□□□□ -1.41
HERC4-215ENST00000515753 OGFOD2Q6N063 350 aa6.22□□□□□ -1.41
HERC4-215ENST00000515753 ZNF765Q7L2R6 523 aa6.22□□□□□ -1.41
HERC4-215ENST00000515753 CCNJLQ8IV13 435 aa6.22□□□□□ -1.41
HERC4-215ENST00000515753 FLCNQ8NFG4 579 aa6.22□□□□□ -1.41
HERC4-215ENST00000515753 FBXL18Q96ME1 805 aa6.22□□□□□ -1.41
HERC4-215ENST00000515753 TCF12Q99081 682 aa6.22□□□□□ -1.41
HERC4-215ENST00000515753 SEMA6CQ9H3T2 930 aa6.22□□□□□ -1.41
HERC4-215ENST00000515753 LIN7BQ9HAP6 207 aa6.22□□□□□ -1.41
HERC4-215ENST00000515753 RAD18Q9NS91 495 aa6.22□□□□□ -1.41
HERC4-215ENST00000515753 FAM105AQ9NUU6 356 aa6.22□□□□□ -1.41
HERC4-215ENST00000515753 BSDC1Q9NW68 430 aaPredicted RBP6.22□□□□□ -1.41
HERC4-215ENST00000515753 ZC3H7BQ9UGR2 993 aaKnown RBP6.22□□□□□ -1.41
HERC4-215ENST00000515753 AP4E1Q9UPM8 1137 aa6.22□□□□□ -1.41
HERC4-215ENST00000515753 DYNC1LI2O43237 492 aaPredicted RBP6.21□□□□□ -1.42
HERC4-215ENST00000515753 CYP11A1P05108 521 aa6.21□□□□□ -1.42
HERC4-215ENST00000515753 FZD5Q13467 585 aa6.21□□□□□ -1.42
HERC4-215ENST00000515753 DUSP27Q5VZP5 1158 aa6.21□□□□□ -1.42
HERC4-215ENST00000515753 CBLL1Q75N03 491 aa6.21□□□□□ -1.42
HERC4-215ENST00000515753 TXNDC2Q86VQ3 553 aa6.21□□□□□ -1.42
HERC4-215ENST00000515753 BRD1O95696 1058 aa6.2□□□□□ -1.42
HERC4-215ENST00000515753 ASPAP45381 313 aa6.2□□□□□ -1.42
HERC4-215ENST00000515753 MAP7Q14244 749 aa6.2□□□□□ -1.42
HERC4-215ENST00000515753 GALNT12Q8IXK2 581 aa6.2□□□□□ -1.42
HERC4-215ENST00000515753 TRIM56Q9BRZ2 755 aaKnown RBP6.2□□□□□ -1.42
HERC4-215ENST00000515753 KRTAP4-9Q9BYQ8 210 aa6.2□□□□□ -1.42
HERC4-215ENST00000515753 PAK6Q9NQU5 681 aaPredicted RBP6.2□□□□□ -1.42
HERC4-215ENST00000515753 CORO1BQ9BR76 489 aa6.19□□□□□ -1.42
HERC4-215ENST00000515753 ACSS3Q9H6R3 686 aa6.19□□□□□ -1.42
HERC4-215ENST00000515753 GNEQ9Y223 722 aaKnown RBP6.19□□□□□ -1.42
HERC4-215ENST00000515753 DAGLAQ9Y4D2 1042 aa6.19□□□□□ -1.42
HERC4-215ENST00000515753 ZNF574Q6ZN55 896 aaPredicted RBP6.18□□□□□ -1.42
HERC4-215ENST00000515753 TRAIPQ9BWF2 469 aa6.18□□□□□ -1.42
HERC4-215ENST00000515753 C1GALT1Q9NS00 363 aa6.18□□□□□ -1.42
HERC4-215ENST00000515753 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.17□□□□□ -1.42
HERC4-215ENST00000515753 EIF4EBP3O60516 100 aaPredicted RBP6.17□□□□□ -1.42
HERC4-215ENST00000515753 ICMTO60725 284 aa6.17□□□□□ -1.42
HERC4-215ENST00000515753 AOC2O75106 756 aa6.17□□□□□ -1.42
HERC4-215ENST00000515753 PDE3AQ14432 1141 aa6.17□□□□□ -1.42
HERC4-215ENST00000515753 ASIC4Q96FT7 647 aa6.17□□□□□ -1.42
HERC4-215ENST00000515753 EHD4Q9H223 541 aa6.17□□□□□ -1.42
HERC4-215ENST00000515753 PPP1R9AQ9ULJ8 1098 aa6.17□□□□□ -1.42
HERC4-215ENST00000515753 B3GALT4O96024 378 aa6.16□□□□□ -1.42
HERC4-215ENST00000515753 ITGB5P18084 799 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms