RNA–Protein interactions for RNA: ENST00000515529.4

DDR1-279, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 340 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-279ENST00000515529 ABCF2Q9UG63 623 aa31.8■■■□□ 2.68
DDR1-279ENST00000515529 ASTN2O75129 1339 aaPredicted RBP31.79■■■□□ 2.68
DDR1-279ENST00000515529 PASKQ96RG2 1323 aa31.79■■■□□ 2.68
DDR1-279ENST00000515529 CRKP46108 304 aa31.79■■■□□ 2.68
DDR1-279ENST00000515529 IRX6P78412 446 aaPredicted RBP31.79■■■□□ 2.68
DDR1-279ENST00000515529 HDLBPQ00341 1268 aaKnown RBP31.79■■■□□ 2.68
DDR1-279ENST00000515529 PITPNM2Q9BZ72 1349 aa31.78■■■□□ 2.68
DDR1-279ENST00000515529 SPDYE2BA6NHP3 402 aa31.78■■■□□ 2.68
DDR1-279ENST00000515529 SPDYE6P0CI01 402 aa31.78■■■□□ 2.68
DDR1-279ENST00000515529 MCAMP43121 646 aa31.77■■■□□ 2.68
DDR1-279ENST00000515529 ZBED3Q96IU2 234 aaPredicted RBP31.77■■■□□ 2.68
DDR1-279ENST00000515529 ZNF512BQ96KM6 892 aaPredicted RBP31.77■■■□□ 2.68
DDR1-279ENST00000515529 TRAF5O00463 557 aa31.76■■■□□ 2.67
DDR1-279ENST00000515529 PRDX5P30044 214 aa31.76■■■□□ 2.67
DDR1-279ENST00000515529 PI16Q6UXB8 463 aa31.76■■■□□ 2.67
DDR1-279ENST00000515529 DZIP1Q86YF9 867 aaKnown RBP31.76■■■□□ 2.67
DDR1-279ENST00000515529 ZBTB47Q9UFB7 747 aaPredicted RBP31.76■■■□□ 2.67
DDR1-279ENST00000515529 ADM5C9JUS6 153 aa31.75■■■□□ 2.67
DDR1-279ENST00000515529 ERICH6Q7L0X2 663 aa31.75■■■□□ 2.67
DDR1-279ENST00000515529 APOBEC3FQ8IUX4 373 aaKnown RBP31.75■■■□□ 2.67
DDR1-279ENST00000515529 MRIQ9BWK5 157 aa31.75■■■□□ 2.67
DDR1-279ENST00000515529 SNRKQ9NRH2 765 aa31.75■■■□□ 2.67
DDR1-279ENST00000515529 PCDHAC2Q9Y5I4 1007 aa31.75■■■□□ 2.67
DDR1-279ENST00000515529 HDAC1Q13547 482 aaPredicted RBP31.74■■■□□ 2.67
DDR1-279ENST00000515529 PRMT6Q96LA8 375 aaPredicted RBP31.74■■■□□ 2.67
DDR1-279ENST00000515529 RWDD1Q9H446 243 aaPredicted RBP31.74■■■□□ 2.67
DDR1-279ENST00000515529 SMARCA5O60264 1052 aaPredicted RBP31.73■■■□□ 2.67
DDR1-279ENST00000515529 SLF2Q8IX21 1173 aa31.73■■■□□ 2.67
DDR1-279ENST00000515529 ZNF408Q9H9D4 720 aa31.73■■■□□ 2.67
DDR1-279ENST00000515529 TMEM88BA6NKF7 163 aa31.72■■■□□ 2.67
DDR1-279ENST00000515529 HHIPL2Q6UWX4 724 aa31.72■■■□□ 2.67
DDR1-279ENST00000515529 VEZTQ9HBM0 779 aa31.72■■■□□ 2.67
DDR1-279ENST00000515529 LRP2BPQ9P2M1 347 aa31.72■■■□□ 2.67
DDR1-279ENST00000515529 CLRN2A0PK11 232 aa31.71■■■□□ 2.67
DDR1-279ENST00000515529 FMR1Q06787 632 aaKnown RBP eCLIP31.71■■■□□ 2.67
DDR1-279ENST00000515529 ZDHHC15Q96MV8 337 aa31.71■■■□□ 2.67
DDR1-279ENST00000515529 CREBZFQ9NS37 354 aa31.71■■■□□ 2.67
DDR1-279ENST00000515529 RAI14Q9P0K7 980 aa31.71■■■□□ 2.67
DDR1-279ENST00000515529 CELF2O95319 508 aaKnown RBP31.7■■■□□ 2.67
DDR1-279ENST00000515529 DIXDC1Q155Q3 683 aa31.7■■■□□ 2.67
DDR1-279ENST00000515529 TBC1D9Q6ZT07 1266 aa31.7■■■□□ 2.67
DDR1-279ENST00000515529 GCC1Q96CN9 775 aa31.7■■■□□ 2.67
DDR1-279ENST00000515529 ZAP70P43403 619 aa31.69■■■□□ 2.66
DDR1-279ENST00000515529 TDRD3Q9H7E2 651 aaKnown RBP31.69■■■□□ 2.66
DDR1-279ENST00000515529 TMOD2Q9NZR1 351 aa31.69■■■□□ 2.66
DDR1-279ENST00000515529 SCAF8Q9UPN6 1271 aaKnown RBP31.69■■■□□ 2.66
DDR1-279ENST00000515529 GSTO1P78417 241 aa31.68■■■□□ 2.66
DDR1-279ENST00000515529 GPATCH3Q96I76 525 aa31.68■■■□□ 2.66
DDR1-279ENST00000515529 ZNF70Q9UC06 446 aaPredicted RBP31.68■■■□□ 2.66
DDR1-279ENST00000515529 POLR2AP24928 1970 aaKnown RBP31.68■■■□□ 2.66
DDR1-279ENST00000515529 TNFAIP1Q13829 316 aa31.67■■■□□ 2.66
DDR1-279ENST00000515529 SPDYE2Q495Y8 402 aa31.67■■■□□ 2.66
DDR1-279ENST00000515529 CDCA5Q96FF9 252 aa31.67■■■□□ 2.66
DDR1-279ENST00000515529 DAGLAQ9Y4D2 1042 aa31.67■■■□□ 2.66
DDR1-279ENST00000515529 HTRA3P83110 453 aa31.66■■■□□ 2.66
DDR1-279ENST00000515529 DLK2Q6UY11 383 aa31.66■■■□□ 2.66
DDR1-279ENST00000515529 ABT1Q9ULW3 272 aaKnown RBP31.66■■■□□ 2.66
DDR1-279ENST00000515529 CYP2E1P05181 493 aaPredicted RBP31.65■■■□□ 2.66
DDR1-279ENST00000515529 LDHCP07864 332 aa31.65■■■□□ 2.66
DDR1-279ENST00000515529 MECOMQ03112 1051 aa31.65■■■□□ 2.66
DDR1-279ENST00000515529 PPIL4Q8WUA2 492 aaKnown RBP eCLIP31.65■■■□□ 2.66
DDR1-279ENST00000515529 ECM29Q5VYK3 1845 aa31.64■■■□□ 2.66
DDR1-279ENST00000515529 CENPBP07199 599 aaPredicted RBP31.64■■■□□ 2.66
DDR1-279ENST00000515529 NF2P35240 595 aa31.64■■■□□ 2.66
DDR1-279ENST00000515529 ANKRD45Q5TZF3 282 aa31.64■■■□□ 2.66
DDR1-279ENST00000515529 APOBEC3HQ6NTF7 200 aaKnown RBP31.64■■■□□ 2.66
DDR1-279ENST00000515529 PPP2R3BQ9Y5P8 575 aa31.64■■■□□ 2.66
DDR1-279ENST00000515529 AOX1Q06278 1338 aa31.64■■■□□ 2.66
DDR1-279ENST00000515529 TRPM7Q96QT4 1865 aa31.63■■■□□ 2.65
DDR1-279ENST00000515529 TNNI2P48788 182 aa31.63■■■□□ 2.65
DDR1-279ENST00000515529 CST9Q5W186 159 aa31.63■■■□□ 2.65
DDR1-279ENST00000515529 DNAJC2Q99543 621 aaKnown RBP31.63■■■□□ 2.65
DDR1-279ENST00000515529 DEFB129Q9H1M3 183 aa31.63■■■□□ 2.65
DDR1-279ENST00000515529 TTF1Q15361 905 aaPredicted RBP31.62■■■□□ 2.65
DDR1-279ENST00000515529 NSUN4Q96CB9 384 aaKnown RBP31.62■■■□□ 2.65
DDR1-279ENST00000515529 AKAP11Q9UKA4 1901 aa31.62■■■□□ 2.65
DDR1-279ENST00000515529 NDUFB9Q9Y6M9 179 aa31.62■■■□□ 2.65
DDR1-279ENST00000515529 MROH7-TTC4A0A0A0MT08 1334 aa31.61■■■□□ 2.65
DDR1-279ENST00000515529 TCP10L2B9ZVM9 353 aa31.61■■■□□ 2.65
DDR1-279ENST00000515529 IGSF3O75054 1194 aa31.61■■■□□ 2.65
DDR1-279ENST00000515529 ATP5JP18859 108 aa31.61■■■□□ 2.65
DDR1-279ENST00000515529 NAA16Q6N069 864 aaPredicted RBP31.61■■■□□ 2.65
DDR1-279ENST00000515529 C2orf69Q8N8R5 385 aa31.61■■■□□ 2.65
DDR1-279ENST00000515529 PIH1D3Q9NQM4 214 aaKnown RBP31.61■■■□□ 2.65
DDR1-279ENST00000515529 ECHDC1Q9NTX5 307 aa31.61■■■□□ 2.65
DDR1-279ENST00000515529 GAKO14976 1311 aa31.6■■■□□ 2.65
DDR1-279ENST00000515529 IDH1O75874 414 aaKnown RBP31.6■■■□□ 2.65
DDR1-279ENST00000515529 PRAMEF18Q5VWM3 479 aa31.6■■■□□ 2.65
DDR1-279ENST00000515529 FAM163AQ96GL9 167 aaPredicted RBP31.6■■■□□ 2.65
DDR1-279ENST00000515529 NOL10Q9BSC4 688 aaKnown RBP31.6■■■□□ 2.65
DDR1-279ENST00000515529 BOLA2Q9H3K6 86 aa31.6■■■□□ 2.65
DDR1-279ENST00000515529 GBA2Q9HCG7 927 aaPredicted RBP31.6■■■□□ 2.65
DDR1-279ENST00000515529 USP40Q9NVE5 1235 aa31.59■■■□□ 2.65
DDR1-279ENST00000515529 MYH2Q9UKX2 1941 aa31.58■■■□□ 2.65
DDR1-279ENST00000515529 CACNB3P54284 484 aa31.58■■■□□ 2.65
DDR1-279ENST00000515529 MAP3K12Q12852 859 aa31.58■■■□□ 2.65
DDR1-279ENST00000515529 RASA3Q14644 834 aa31.58■■■□□ 2.65
DDR1-279ENST00000515529 GOLIM4O00461 696 aa31.57■■■□□ 2.64
DDR1-279ENST00000515529 IGHDP01880 384 aa31.57■■■□□ 2.64
DDR1-279ENST00000515529 BTDP43251 543 aa31.57■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms