RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-223ENST00000515459 TEPSINQ96N21 525 aa19.94■□□□□ 0.78
LMNA-223ENST00000515459 TCP10L2B9ZVM9 353 aa19.93■□□□□ 0.78
LMNA-223ENST00000515459 EN2P19622 333 aaPredicted RBP19.93■□□□□ 0.78
LMNA-223ENST00000515459 GTF2A2P52657 109 aa19.93■□□□□ 0.78
LMNA-223ENST00000515459 MAP3K9P80192 1104 aa19.93■□□□□ 0.78
LMNA-223ENST00000515459 CAP1Q01518 475 aa19.93■□□□□ 0.78
LMNA-223ENST00000515459 TAF1CQ15572 869 aaPredicted RBP19.93■□□□□ 0.78
LMNA-223ENST00000515459 TMEM106CQ9BVX2 250 aa19.93■□□□□ 0.78
LMNA-223ENST00000515459 TMEM39BQ9GZU3 492 aa19.93■□□□□ 0.78
LMNA-223ENST00000515459 ZFYVE28Q9HCC9 887 aa19.93■□□□□ 0.78
LMNA-223ENST00000515459 SALL2Q9Y467 1007 aaPredicted RBP19.93■□□□□ 0.78
LMNA-223ENST00000515459 CCL15-CCL14A0A0B4J2E2 113 aa19.92■□□□□ 0.78
LMNA-223ENST00000515459 ALDH1L1O75891 902 aa19.92■□□□□ 0.78
LMNA-223ENST00000515459 CRKP46108 304 aa19.92■□□□□ 0.78
LMNA-223ENST00000515459 VGLL4Q14135 290 aa19.92■□□□□ 0.78
LMNA-223ENST00000515459 CCL15Q16663 113 aa19.92■□□□□ 0.78
LMNA-223ENST00000515459 CDAN1Q8IWY9 1227 aa19.92■□□□□ 0.78
LMNA-223ENST00000515459 CNKSR2Q8WXI2 1034 aa19.92■□□□□ 0.78
LMNA-223ENST00000515459 BRI3BPQ8WY22 251 aa19.92■□□□□ 0.78
LMNA-223ENST00000515459 CSADQ9Y600 493 aa19.92■□□□□ 0.78
LMNA-223ENST00000515459 NBPF11Q86T75 865 aa19.91■□□□□ 0.78
LMNA-223ENST00000515459 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.91■□□□□ 0.78
LMNA-223ENST00000515459 ZNF333Q96JL9 665 aa19.91■□□□□ 0.78
LMNA-223ENST00000515459 PUS3Q9BZE2 481 aaKnown RBP19.91■□□□□ 0.78
LMNA-223ENST00000515459 CENPFP49454 3210 aa19.9■□□□□ 0.78
LMNA-223ENST00000515459 SLC9C1Q4G0N8 1177 aa19.9■□□□□ 0.78
LMNA-223ENST00000515459 SLC4A10Q6U841 1118 aa19.9■□□□□ 0.78
LMNA-223ENST00000515459 VPS37DQ86XT2 251 aa19.9■□□□□ 0.78
LMNA-223ENST00000515459 OTUD5Q96G74 571 aa19.9■□□□□ 0.78
LMNA-223ENST00000515459 SRCIN1Q9C0H9 1055 aa19.9■□□□□ 0.78
LMNA-223ENST00000515459 MROH5Q6ZUA9 1318 aa19.9■□□□□ 0.78
LMNA-223ENST00000515459 HDLBPQ00341 1268 aaKnown RBP19.89■□□□□ 0.77
LMNA-223ENST00000515459 FAM43AQ8N2R8 423 aa19.89■□□□□ 0.77
LMNA-223ENST00000515459 RIPOR2Q9Y4F9 1068 aa19.89■□□□□ 0.77
LMNA-223ENST00000515459 MKI67P46013 3256 aaKnown RBP19.89■□□□□ 0.77
LMNA-223ENST00000515459 WDHD1O75717 1129 aaPredicted RBP19.88■□□□□ 0.77
LMNA-223ENST00000515459 FBXO33Q7Z6M2 555 aa19.88■□□□□ 0.77
LMNA-223ENST00000515459 TBC1D22AQ8WUA7 517 aa19.88■□□□□ 0.77
LMNA-223ENST00000515459 SUCLG2Q96I99 432 aa19.88■□□□□ 0.77
LMNA-223ENST00000515459 MRS2Q9HD23 443 aa19.88■□□□□ 0.77
LMNA-223ENST00000515459 IQSEC3Q9UPP2 1182 aaPredicted RBP19.88■□□□□ 0.77
LMNA-223ENST00000515459 PTCH2Q9Y6C5 1203 aa19.88■□□□□ 0.77
LMNA-223ENST00000515459 SPDYE5A6NIY4 337 aa19.87■□□□□ 0.77
LMNA-223ENST00000515459 FRAT2O75474 233 aaPredicted RBP19.87■□□□□ 0.77
LMNA-223ENST00000515459 GRIK5Q16478 980 aa19.87■□□□□ 0.77
LMNA-223ENST00000515459 TEKT1Q969V4 418 aa19.87■□□□□ 0.77
LMNA-223ENST00000515459 KAZALD1Q96I82 304 aa19.87■□□□□ 0.77
LMNA-223ENST00000515459 SPINK5Q9NQ38 1064 aaPredicted RBP19.87■□□□□ 0.77
LMNA-223ENST00000515459 NBPF7P0C2Y1 421 aaPredicted RBP19.86■□□□□ 0.77
LMNA-223ENST00000515459 CETPP11597 493 aa19.86■□□□□ 0.77
LMNA-223ENST00000515459 CHAF1AQ13111 956 aaPredicted RBP19.86■□□□□ 0.77
LMNA-223ENST00000515459 CAVIN4Q5BKX8 364 aa19.86■□□□□ 0.77
LMNA-223ENST00000515459 ERO1BQ86YB8 467 aa19.86■□□□□ 0.77
LMNA-223ENST00000515459 BRCA2P51587 3418 aa19.85■□□□□ 0.77
LMNA-223ENST00000515459 TLR2O60603 784 aa19.85■□□□□ 0.77
LMNA-223ENST00000515459 CACNB3P54284 484 aa19.85■□□□□ 0.77
LMNA-223ENST00000515459 KIF22Q14807 665 aa19.85■□□□□ 0.77
LMNA-223ENST00000515459 SLC4A8Q2Y0W8 1093 aa19.85■□□□□ 0.77
LMNA-223ENST00000515459 HOOK2Q96ED9 719 aa19.85■□□□□ 0.77
LMNA-223ENST00000515459 ZCCHC17Q9NP64 241 aaKnown RBP19.85■□□□□ 0.77
LMNA-223ENST00000515459 TMOD2Q9NZR1 351 aa19.85■□□□□ 0.77
LMNA-223ENST00000515459 SNCAIPQ9Y6H5 919 aa19.85■□□□□ 0.77
LMNA-223ENST00000515459 UTYO14607 1347 aa19.84■□□□□ 0.77
LMNA-223ENST00000515459 ZSWIM8A7E2V4 1837 aa19.84■□□□□ 0.77
LMNA-223ENST00000515459 METTL24Q5JXM2 366 aa19.84■□□□□ 0.77
LMNA-223ENST00000515459 FAM83AQ86UY5 434 aa19.84■□□□□ 0.77
LMNA-223ENST00000515459 ZDHHC15Q96MV8 337 aa19.84■□□□□ 0.77
LMNA-223ENST00000515459 WRNIP1Q96S55 665 aa19.84■□□□□ 0.77
LMNA-223ENST00000515459 MRIQ9BWK5 157 aa19.84■□□□□ 0.77
LMNA-223ENST00000515459 BICC1Q9H694 974 aaKnown RBP19.84■□□□□ 0.77
LMNA-223ENST00000515459 PDE8BO95263 885 aa19.83■□□□□ 0.77
LMNA-223ENST00000515459 SNAPC2Q13487 334 aa19.83■□□□□ 0.77
LMNA-223ENST00000515459 RABL6Q3YEC7 729 aaPredicted RBP19.83■□□□□ 0.77
LMNA-223ENST00000515459 LRRC24Q50LG9 513 aa19.83■□□□□ 0.77
LMNA-223ENST00000515459 FKBP1CQ5VVH2 108 aa19.83■□□□□ 0.77
LMNA-223ENST00000515459 MAST3O60307 1309 aa19.82■□□□□ 0.76
LMNA-223ENST00000515459 BTBD19C9JJ37 291 aa19.82■□□□□ 0.76
LMNA-223ENST00000515459 IRF6O14896 467 aa19.82■□□□□ 0.76
LMNA-223ENST00000515459 GNRH1P01148 92 aa19.82■□□□□ 0.76
LMNA-223ENST00000515459 LACTBP83111 547 aaPredicted RBP19.82■□□□□ 0.76
LMNA-223ENST00000515459 PPIL2Q13356 520 aa19.82■□□□□ 0.76
LMNA-223ENST00000515459 ZKSCAN4Q969J2 545 aaPredicted RBP19.82■□□□□ 0.76
LMNA-223ENST00000515459 ARHGAP39Q9C0H5 1083 aa19.82■□□□□ 0.76
LMNA-223ENST00000515459 SUGT1Q9Y2Z0 365 aa19.82■□□□□ 0.76
LMNA-223ENST00000515459 MYH13Q9UKX3 1938 aa19.81■□□□□ 0.76
LMNA-223ENST00000515459 MYCP01106 439 aaPredicted RBP19.81■□□□□ 0.76
LMNA-223ENST00000515459 FXR1P51114 621 aaKnown RBP eCLIP19.81■□□□□ 0.765e-7■■■■□ 19.8
LMNA-223ENST00000515459 DCAF15Q66K64 600 aa19.81■□□□□ 0.76
LMNA-223ENST00000515459 APOBEC3HQ6NTF7 200 aaKnown RBP19.81■□□□□ 0.76
LMNA-223ENST00000515459 VGLL2Q8N8G2 317 aa19.81■□□□□ 0.76
LMNA-223ENST00000515459 SH3TC2Q8TF17 1288 aa19.81■□□□□ 0.76
LMNA-223ENST00000515459 BCAMP50895 628 aa19.8■□□□□ 0.76
LMNA-223ENST00000515459 PRMT2P55345 433 aa19.8■□□□□ 0.76
LMNA-223ENST00000515459 ANKRD44Q8N8A2 993 aa19.8■□□□□ 0.76
LMNA-223ENST00000515459 RPAP1Q9BWH6 1393 aaPredicted RBP19.8■□□□□ 0.76
LMNA-223ENST00000515459 PPATQ06203 517 aa19.79■□□□□ 0.76
LMNA-223ENST00000515459 HHIPL2Q6UWX4 724 aa19.79■□□□□ 0.76
LMNA-223ENST00000515459 ZNF341Q9BYN7 854 aa19.79■□□□□ 0.76
LMNA-223ENST00000515459 COLQQ9Y215 455 aaPredicted RBP19.79■□□□□ 0.76
LMNA-223ENST00000515459 KIF16BQ96L93 1317 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms