RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 NF2P35240 595 aa15.77■□□□□ 0.12
CLCN3-210ENST00000515420 CRKP46108 304 aa15.77■□□□□ 0.12
CLCN3-210ENST00000515420 HUNKP57058 714 aa15.77■□□□□ 0.12
CLCN3-210ENST00000515420 TIMM10P62072 90 aa15.77■□□□□ 0.12
CLCN3-210ENST00000515420 TNFAIP1Q13829 316 aa15.77■□□□□ 0.12
CLCN3-210ENST00000515420 HHIPL2Q6UWX4 724 aa15.77■□□□□ 0.12
CLCN3-210ENST00000515420 DLK2Q6UY11 383 aa15.77■□□□□ 0.12
CLCN3-210ENST00000515420 RPAP2Q8IXW5 612 aaPredicted RBP15.77■□□□□ 0.12
CLCN3-210ENST00000515420 ZGPATQ8N5A5 531 aaKnown RBP15.77■□□□□ 0.12
CLCN3-210ENST00000515420 TEKT1Q969V4 418 aa15.77■□□□□ 0.12
CLCN3-210ENST00000515420 PRMT6Q96LA8 375 aaPredicted RBP15.77■□□□□ 0.12
CLCN3-210ENST00000515420 OS9Q13438 667 aaPredicted RBP15.76■□□□□ 0.11
CLCN3-210ENST00000515420 SPDYE2Q495Y8 402 aa15.76■□□□□ 0.11
CLCN3-210ENST00000515420 ZDHHC15Q96MV8 337 aa15.76■□□□□ 0.11
CLCN3-210ENST00000515420 RNF39Q9H2S5 420 aa15.76■□□□□ 0.11
CLCN3-210ENST00000515420 HMMRO75330 724 aa15.75■□□□□ 0.11
CLCN3-210ENST00000515420 ARID4AP29374 1257 aaPredicted RBP15.75■□□□□ 0.11
CLCN3-210ENST00000515420 HOXD11P31277 338 aaPredicted RBP15.75■□□□□ 0.11
CLCN3-210ENST00000515420 MAP2K2P36507 400 aa15.75■□□□□ 0.11
CLCN3-210ENST00000515420 RASGRF1Q13972 1273 aa15.75■□□□□ 0.11
CLCN3-210ENST00000515420 GRIK5Q16478 980 aa15.75■□□□□ 0.11
CLCN3-210ENST00000515420 HSP90AB4PQ58FF6 505 aa15.75■□□□□ 0.11
CLCN3-210ENST00000515420 CYP4F22Q6NT55 531 aa15.75■□□□□ 0.11
CLCN3-210ENST00000515420 PAXIP1Q6ZW49 1069 aaPredicted RBP15.75■□□□□ 0.11
CLCN3-210ENST00000515420 ERC1Q8IUD2 1116 aa15.75■□□□□ 0.11
CLCN3-210ENST00000515420 NEUROD6Q96NK8 337 aa15.75■□□□□ 0.11
CLCN3-210ENST00000515420 DEFB129Q9H1M3 183 aa15.75■□□□□ 0.11
CLCN3-210ENST00000515420 PCDHAC2Q9Y5I4 1007 aa15.75■□□□□ 0.11
CLCN3-210ENST00000515420 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.75■□□□□ 0.11
CLCN3-210ENST00000515420 LDHBP07195 334 aaKnown RBP15.74■□□□□ 0.11
CLCN3-210ENST00000515420 MAP2K1Q02750 393 aaPredicted RBP15.74■□□□□ 0.11
CLCN3-210ENST00000515420 TNNI3KQ59H18 835 aa15.74■□□□□ 0.11
CLCN3-210ENST00000515420 GORABQ5T7V8 394 aa15.74■□□□□ 0.11
CLCN3-210ENST00000515420 RGMBQ6NW40 437 aa15.74■□□□□ 0.11
CLCN3-210ENST00000515420 ZNF70Q9UC06 446 aaPredicted RBP15.74■□□□□ 0.11
CLCN3-210ENST00000515420 FPGT-TNNI3KV9GXZ4 949 aa15.74■□□□□ 0.11
CLCN3-210ENST00000515420 MYH2Q9UKX2 1941 aa15.73■□□□□ 0.11
CLCN3-210ENST00000515420 CLRN2A0PK11 232 aa15.73■□□□□ 0.11
CLCN3-210ENST00000515420 UQCRFS1P1P0C7P4 283 aa15.73■□□□□ 0.11
CLCN3-210ENST00000515420 HSPA1AP0DMV8 641 aaKnown RBP15.73■□□□□ 0.11
CLCN3-210ENST00000515420 HSPA1BP0DMV9 641 aaKnown RBP15.73■□□□□ 0.11
CLCN3-210ENST00000515420 PRDX5P30044 214 aa15.73■□□□□ 0.11
CLCN3-210ENST00000515420 NOGQ13253 232 aa15.73■□□□□ 0.11
CLCN3-210ENST00000515420 FKBP1CQ5VVH2 108 aa15.73■□□□□ 0.11
CLCN3-210ENST00000515420 SPTY2D1Q68D10 685 aaPredicted RBP15.73■□□□□ 0.11
CLCN3-210ENST00000515420 CCDC102AQ96A19 550 aa15.73■□□□□ 0.11
CLCN3-210ENST00000515420 TDRD3Q9H7E2 651 aaKnown RBP15.73■□□□□ 0.11
CLCN3-210ENST00000515420 VEZTQ9HBM0 779 aa15.73■□□□□ 0.11
CLCN3-210ENST00000515420 AOX1Q06278 1338 aa15.72■□□□□ 0.11
CLCN3-210ENST00000515420 TNNI2P48788 182 aa15.72■□□□□ 0.11
CLCN3-210ENST00000515420 SUPT20HL1Q3ZLR7 823 aa15.72■□□□□ 0.11
CLCN3-210ENST00000515420 C20orf194Q5TEA3 1177 aa15.72■□□□□ 0.11
CLCN3-210ENST00000515420 ZNF512BQ96KM6 892 aaPredicted RBP15.72■□□□□ 0.11
CLCN3-210ENST00000515420 WBP1LQ9NX94 342 aa15.72■□□□□ 0.11
CLCN3-210ENST00000515420 SCAF8Q9UPN6 1271 aaKnown RBP15.72■□□□□ 0.11
CLCN3-210ENST00000515420 AKAP11Q9UKA4 1901 aa15.72■□□□□ 0.11
CLCN3-210ENST00000515420 UNCXA6NJT0 531 aa15.71■□□□□ 0.11
CLCN3-210ENST00000515420 IGSF3O75054 1194 aa15.71■□□□□ 0.11
CLCN3-210ENST00000515420 MAP3K11Q16584 847 aa15.71■□□□□ 0.11
CLCN3-210ENST00000515420 CCDC158Q5M9N0 1113 aa15.71■□□□□ 0.11
CLCN3-210ENST00000515420 PRAMEF18Q5VWM3 479 aa15.71■□□□□ 0.11
CLCN3-210ENST00000515420 APOBEC3HQ6NTF7 200 aaKnown RBP15.71■□□□□ 0.11
CLCN3-210ENST00000515420 ARMC9Q7Z3E5 817 aa15.71■□□□□ 0.11
CLCN3-210ENST00000515420 SLF2Q8IX21 1173 aa15.71■□□□□ 0.11
CLCN3-210ENST00000515420 YTHDC1Q96MU7 727 aaKnown RBP15.71■□□□□ 0.11
CLCN3-210ENST00000515420 TMOD2Q9NZR1 351 aa15.71■□□□□ 0.11
CLCN3-210ENST00000515420 RPAP1Q9BWH6 1393 aaPredicted RBP15.71■□□□□ 0.11
CLCN3-210ENST00000515420 SSC5DA1L4H1 1573 aa15.7■□□□□ 0.1
CLCN3-210ENST00000515420 FAM155AB1AL88 458 aaPredicted RBP15.7■□□□□ 0.1
CLCN3-210ENST00000515420 SLC10A3P09131 477 aa15.7■□□□□ 0.1
CLCN3-210ENST00000515420 ZNF157P51786 506 aaPredicted RBP15.7■□□□□ 0.1
CLCN3-210ENST00000515420 RASA3Q14644 834 aa15.7■□□□□ 0.1
CLCN3-210ENST00000515420 FAM83AQ86UY5 434 aa15.7■□□□□ 0.1
CLCN3-210ENST00000515420 SIRT2Q8IXJ6 389 aa15.7■□□□□ 0.1
CLCN3-210ENST00000515420 SPATA5Q8NB90 893 aa15.7■□□□□ 0.1
CLCN3-210ENST00000515420 AIDAQ96BJ3 306 aa15.7■□□□□ 0.1
CLCN3-210ENST00000515420 HMG20BQ9P0W2 317 aa15.7■□□□□ 0.1
CLCN3-210ENST00000515420 EXOC6BQ9Y2D4 811 aa15.7■□□□□ 0.1
CLCN3-210ENST00000515420 DAGLAQ9Y4D2 1042 aa15.7■□□□□ 0.1
CLCN3-210ENST00000515420 PPP1R12BO60237 982 aaPredicted RBP15.69■□□□□ 0.1
CLCN3-210ENST00000515420 MCAMP43121 646 aa15.69■□□□□ 0.1
CLCN3-210ENST00000515420 RRP1P56182 461 aaKnown RBP15.69■□□□□ 0.1
CLCN3-210ENST00000515420 GRM1Q13255 1194 aa15.69■□□□□ 0.1
CLCN3-210ENST00000515420 TTLL12Q14166 644 aaPredicted RBP15.69■□□□□ 0.1
CLCN3-210ENST00000515420 KIF1BPQ96EK5 621 aa15.69■□□□□ 0.1
CLCN3-210ENST00000515420 FAM163AQ96GL9 167 aaPredicted RBP15.69■□□□□ 0.1
CLCN3-210ENST00000515420 DBNDD2Q9BQY9 259 aa15.69■□□□□ 0.1
CLCN3-210ENST00000515420 MAST2Q6P0Q8 1798 aa15.69■□□□□ 0.1
CLCN3-210ENST00000515420 GAKO14976 1311 aa15.68■□□□□ 0.1
CLCN3-210ENST00000515420 LAMB1P07942 1786 aa15.68■□□□□ 0.1
CLCN3-210ENST00000515420 CA12O43570 354 aa15.68■□□□□ 0.1
CLCN3-210ENST00000515420 AOC2O75106 756 aa15.68■□□□□ 0.1
CLCN3-210ENST00000515420 RAB11FIP3O75154 756 aa15.68■□□□□ 0.1
CLCN3-210ENST00000515420 DIXDC1Q155Q3 683 aa15.68■□□□□ 0.1
CLCN3-210ENST00000515420 TTC39AQ5SRH9 613 aa15.68■□□□□ 0.1
CLCN3-210ENST00000515420 LDLRAD1Q5T700 205 aa15.68■□□□□ 0.1
CLCN3-210ENST00000515420 ERICH6Q7L0X2 663 aa15.68■□□□□ 0.1
CLCN3-210ENST00000515420 DZIP1Q86YF9 867 aaKnown RBP15.68■□□□□ 0.1
CLCN3-210ENST00000515420 REM2Q8IYK8 340 aaPredicted RBP15.68■□□□□ 0.1
CLCN3-210ENST00000515420 RHPN1Q8TCX5 695 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms