RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 LRRFIP1Q32MZ4 808 aaKnown RBP25.42■■□□□ 1.66
LSM6-207ENST00000515311 DPY19L2Q6NUT2 758 aa25.42■■□□□ 1.66
LSM6-207ENST00000515311 DPF2Q92785 391 aa25.42■■□□□ 1.66
LSM6-207ENST00000515311 RILPL2Q969X0 211 aa25.42■■□□□ 1.66
LSM6-207ENST00000515311 FSD1Q9BTV5 496 aa25.42■■□□□ 1.66
LSM6-207ENST00000515311 RAI14Q9P0K7 980 aa25.42■■□□□ 1.66
LSM6-207ENST00000515311 ZSCAN25Q6NSZ9 544 aa25.41■■□□□ 1.66
LSM6-207ENST00000515311 DZIP1Q86YF9 867 aaKnown RBP25.41■■□□□ 1.66
LSM6-207ENST00000515311 ZBTB12Q9Y330 459 aaPredicted RBP25.41■■□□□ 1.66
LSM6-207ENST00000515311 MYH2Q9UKX2 1941 aa25.41■■□□□ 1.66
LSM6-207ENST00000515311 GMPSP49915 693 aaPredicted RBP25.4■■□□□ 1.66
LSM6-207ENST00000515311 MECOMQ03112 1051 aa25.4■■□□□ 1.66
LSM6-207ENST00000515311 KIAA0825Q8IV33 1275 aa25.4■■□□□ 1.66
LSM6-207ENST00000515311 NSUN4Q96CB9 384 aaKnown RBP25.4■■□□□ 1.66
LSM6-207ENST00000515311 TTF2Q9UNY4 1162 aaKnown RBP25.4■■□□□ 1.66
LSM6-207ENST00000515311 GLTPD2A6NH11 291 aa25.39■■□□□ 1.66
LSM6-207ENST00000515311 ZFYP08048 801 aaPredicted RBP25.39■■□□□ 1.66
LSM6-207ENST00000515311 GSTO1P78417 241 aa25.39■■□□□ 1.66
LSM6-207ENST00000515311 HDLBPQ00341 1268 aaKnown RBP25.39■■□□□ 1.66
LSM6-207ENST00000515311 MRIQ9BWK5 157 aa25.39■■□□□ 1.66
LSM6-207ENST00000515311 DDNO94850 711 aaPredicted RBP25.38■■□□□ 1.65
LSM6-207ENST00000515311 USP17L8P0C7I0 530 aa25.38■■□□□ 1.65
LSM6-207ENST00000515311 PDE6AP16499 860 aa25.38■■□□□ 1.65
LSM6-207ENST00000515311 SLC9C2Q5TAH2 1124 aa25.38■■□□□ 1.65
LSM6-207ENST00000515311 SLF2Q8IX21 1173 aa25.38■■□□□ 1.65
LSM6-207ENST00000515311 OGFOD1Q8N543 542 aa25.38■■□□□ 1.65
LSM6-207ENST00000515311 ZNF384Q8TF68 577 aa25.38■■□□□ 1.65
LSM6-207ENST00000515311 WDR90Q96KV7 1748 aa25.37■■□□□ 1.65
LSM6-207ENST00000515311 ADD2P35612 726 aa25.37■■□□□ 1.65
LSM6-207ENST00000515311 NAA16Q6N069 864 aaPredicted RBP25.37■■□□□ 1.65
LSM6-207ENST00000515311 L3MBTL3Q96JM7 780 aaPredicted RBP25.37■■□□□ 1.65
LSM6-207ENST00000515311 SERPINA10Q9UK55 444 aa25.37■■□□□ 1.65
LSM6-207ENST00000515311 HDAC9Q9UKV0 1011 aa25.37■■□□□ 1.65
LSM6-207ENST00000515311 ADAMTSL1Q8N6G6 1762 aa25.36■■□□□ 1.65
LSM6-207ENST00000515311 SCN4AP35499 1836 aa25.36■■□□□ 1.65
LSM6-207ENST00000515311 F8W031 263 aaPredicted RBP25.36■■□□□ 1.65
LSM6-207ENST00000515311 HIP1O00291 1037 aa25.36■■□□□ 1.65
LSM6-207ENST00000515311 RNF113AO15541 343 aaKnown RBP25.36■■□□□ 1.65
LSM6-207ENST00000515311 ZNF280AP59817 542 aaPredicted RBP25.36■■□□□ 1.65
LSM6-207ENST00000515311 UBE3CQ15386 1083 aa25.36■■□□□ 1.65
LSM6-207ENST00000515311 MAGEB6Q8N7X4 407 aa25.36■■□□□ 1.65
LSM6-207ENST00000515311 TCRBV5S4A2TA0A5A2 114 aa25.35■■□□□ 1.65
LSM6-207ENST00000515311 SCNN1DP51172 638 aa25.35■■□□□ 1.65
LSM6-207ENST00000515311 HHIPL2Q6UWX4 724 aa25.35■■□□□ 1.65
LSM6-207ENST00000515311 TEKT1Q969V4 418 aa25.35■■□□□ 1.65
LSM6-207ENST00000515311 FAM163AQ96GL9 167 aaPredicted RBP25.35■■□□□ 1.65
LSM6-207ENST00000515311 GPRC5DQ9NZD1 345 aa25.35■■□□□ 1.65
LSM6-207ENST00000515311 LDHCP07864 332 aa25.34■■□□□ 1.65
LSM6-207ENST00000515311 DIXDC1Q155Q3 683 aa25.34■■□□□ 1.65
LSM6-207ENST00000515311 CNOT7Q9UIV1 285 aaKnown RBP25.34■■□□□ 1.65
LSM6-207ENST00000515311 MROH7-TTC4A0A0A0MT08 1334 aa25.34■■□□□ 1.65
LSM6-207ENST00000515311 GAKO14976 1311 aa25.34■■□□□ 1.65
LSM6-207ENST00000515311 ZNF532Q9HCE3 1301 aa25.34■■□□□ 1.65
LSM6-207ENST00000515311 CYP7A1P22680 504 aa25.33■■□□□ 1.65
LSM6-207ENST00000515311 CRKP46108 304 aa25.33■■□□□ 1.65
LSM6-207ENST00000515311 MICALL2Q8IY33 904 aa25.33■■□□□ 1.65
LSM6-207ENST00000515311 MTMR14Q8NCE2 650 aa25.32■■□□□ 1.64
LSM6-207ENST00000515311 APPBP2Q92624 585 aa25.32■■□□□ 1.64
LSM6-207ENST00000515311 ZDHHC15Q96MV8 337 aa25.32■■□□□ 1.64
LSM6-207ENST00000515311 ECM29Q5VYK3 1845 aa25.31■■□□□ 1.64
LSM6-207ENST00000515311 H7C1D1 291 aa25.31■■□□□ 1.64
LSM6-207ENST00000515311 LMOD1P29536 600 aaPredicted RBP25.31■■□□□ 1.64
LSM6-207ENST00000515311 ZMYM1Q5SVZ6 1142 aa25.31■■□□□ 1.64
LSM6-207ENST00000515311 DIAPH3Q9NSV4 1193 aa25.31■■□□□ 1.64
LSM6-207ENST00000515311 DAGLAQ9Y4D2 1042 aa25.31■■□□□ 1.64
LSM6-207ENST00000515311 CDC45O75419 566 aa25.3■■□□□ 1.64
LSM6-207ENST00000515311 CHMLP26374 656 aa25.3■■□□□ 1.64
LSM6-207ENST00000515311 ADGRA1Q86SQ6 560 aa25.3■■□□□ 1.64
LSM6-207ENST00000515311 MYOZ2Q9NPC6 264 aa25.3■■□□□ 1.64
LSM6-207ENST00000515311 GPR75-ASB3A0A0A6YYF3 556 aa25.29■■□□□ 1.64
LSM6-207ENST00000515311 SHTN1A0MZ66 631 aa25.29■■□□□ 1.64
LSM6-207ENST00000515311 CHGBP05060 677 aa25.29■■□□□ 1.64
LSM6-207ENST00000515311 CFAP100Q494V2 611 aa25.29■■□□□ 1.64
LSM6-207ENST00000515311 CERS3Q8IU89 383 aa25.29■■□□□ 1.64
LSM6-207ENST00000515311 IQCA1LA6NCM1 817 aa25.28■■□□□ 1.64
LSM6-207ENST00000515311 NMIQ13287 307 aaPredicted RBP25.28■■□□□ 1.64
LSM6-207ENST00000515311 DLGAP5Q15398 846 aa25.28■■□□□ 1.64
LSM6-207ENST00000515311 SLFNL1Q499Z3 407 aa25.28■■□□□ 1.64
LSM6-207ENST00000515311 NOL10Q9BSC4 688 aaKnown RBP25.28■■□□□ 1.64
LSM6-207ENST00000515311 HELLSQ9NRZ9 838 aa25.28■■□□□ 1.64
LSM6-207ENST00000515311 HACL1Q9UJ83 578 aa25.28■■□□□ 1.64
LSM6-207ENST00000515311 SPDYE2BA6NHP3 402 aa25.27■■□□□ 1.64
LSM6-207ENST00000515311 BAG3O95817 575 aa25.27■■□□□ 1.64
LSM6-207ENST00000515311 SPDYE6P0CI01 402 aa25.27■■□□□ 1.64
LSM6-207ENST00000515311 EPS15P42566 896 aa25.27■■□□□ 1.64
LSM6-207ENST00000515311 RBM5P52756 815 aaKnown RBP eCLIP25.27■■□□□ 1.64
LSM6-207ENST00000515311 PPP4CP60510 307 aa25.27■■□□□ 1.64
LSM6-207ENST00000515311 APOBEC3HQ6NTF7 200 aaKnown RBP25.27■■□□□ 1.64
LSM6-207ENST00000515311 CASC1Q6TDU7 716 aa25.27■■□□□ 1.64
LSM6-207ENST00000515311 ZBED3Q96IU2 234 aaPredicted RBP25.27■■□□□ 1.64
LSM6-207ENST00000515311 FAM227BQ96M60 508 aa25.27■■□□□ 1.64
LSM6-207ENST00000515311 ADARB2Q9NS39 739 aaKnown RBP25.27■■□□□ 1.64
LSM6-207ENST00000515311 A0A0D9SFI3 127 aa25.26■■□□□ 1.63
LSM6-207ENST00000515311 BTDP43251 543 aa25.26■■□□□ 1.63
LSM6-207ENST00000515311 RUFY2Q8WXA3 655 aa25.26■■□□□ 1.63
LSM6-207ENST00000515311 OSBP2Q969R2 916 aa25.26■■□□□ 1.63
LSM6-207ENST00000515311 PUS7LQ9H0K6 701 aaKnown RBP25.26■■□□□ 1.63
LSM6-207ENST00000515311 MAGEB6P1A0A0J9YX57 407 aa25.25■■□□□ 1.63
LSM6-207ENST00000515311 PLCG2P16885 1265 aa25.25■■□□□ 1.63
LSM6-207ENST00000515311 KIF4BQ2VIQ3 1234 aa25.25■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms