RNA–Protein interactions for RNA: ENST00000514934.1

SGCA-211, Transcript of sarcoglycan alpha, humanhuman

TSL 4

Gene SGCA, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-211ENST00000514934 SAGE1Q9NXZ1 904 aa18.29■□□□□ 0.52
SGCA-211ENST00000514934 ZNF70Q9UC06 446 aaPredicted RBP18.29■□□□□ 0.52
SGCA-211ENST00000514934 AK9Q5TCS8 1911 aa18.28■□□□□ 0.52
SGCA-211ENST00000514934 GNAI3P08754 354 aa18.28■□□□□ 0.52
SGCA-211ENST00000514934 RLBP1P12271 317 aa18.28■□□□□ 0.52
SGCA-211ENST00000514934 ADORA1P30542 326 aa18.28■□□□□ 0.52
SGCA-211ENST00000514934 IL15P40933 162 aaPredicted RBP18.28■□□□□ 0.52
SGCA-211ENST00000514934 CHAF1AQ13111 956 aaPredicted RBP18.28■□□□□ 0.52
SGCA-211ENST00000514934 ATP2B3Q16720 1220 aa18.28■□□□□ 0.52
SGCA-211ENST00000514934 NBPF12Q5TAG4 269 aaPredicted RBP18.28■□□□□ 0.52
SGCA-211ENST00000514934 TBC1D22AQ8WUA7 517 aa18.28■□□□□ 0.52
SGCA-211ENST00000514934 MRIQ9BWK5 157 aa18.28■□□□□ 0.52
SGCA-211ENST00000514934 TDRD3Q9H7E2 651 aaKnown RBP18.28■□□□□ 0.52
SGCA-211ENST00000514934 RNF186Q9NXI6 227 aa18.28■□□□□ 0.52
SGCA-211ENST00000514934 PNMA6EA0A0J9YXQ4 647 aa18.27■□□□□ 0.52
SGCA-211ENST00000514934 IPO8O15397 1037 aaKnown RBP18.27■□□□□ 0.52
SGCA-211ENST00000514934 SLC5A1P13866 664 aa18.27■□□□□ 0.52
SGCA-211ENST00000514934 PHKA1P46020 1223 aa18.27■□□□□ 0.52
SGCA-211ENST00000514934 RASA3Q14644 834 aa18.27■□□□□ 0.52
SGCA-211ENST00000514934 APOBEC3HQ6NTF7 200 aaKnown RBP18.27■□□□□ 0.52
SGCA-211ENST00000514934 CLUAP1Q96AJ1 413 aa18.27■□□□□ 0.52
SGCA-211ENST00000514934 ZDHHC15Q96MV8 337 aa18.27■□□□□ 0.52
SGCA-211ENST00000514934 BEGAINQ9BUH8 593 aa18.27■□□□□ 0.52
SGCA-211ENST00000514934 SUGT1Q9Y2Z0 365 aa18.27■□□□□ 0.52
SGCA-211ENST00000514934 TNRC18O15417 2968 aaPredicted RBP18.27■□□□□ 0.51
SGCA-211ENST00000514934 VPS37DQ86XT2 251 aa18.26■□□□□ 0.51
SGCA-211ENST00000514934 FRAT1Q92837 279 aaPredicted RBP18.26■□□□□ 0.51
SGCA-211ENST00000514934 CLMNQ96JQ2 1002 aa18.26■□□□□ 0.51
SGCA-211ENST00000514934 SRGAP3O43295 1099 aa18.25■□□□□ 0.51
SGCA-211ENST00000514934 USP2O75604 605 aaPredicted RBP18.25■□□□□ 0.51
SGCA-211ENST00000514934 PRKG1Q13976 671 aa18.25■□□□□ 0.51
SGCA-211ENST00000514934 ZKSCAN2Q63HK3 967 aa18.25■□□□□ 0.51
SGCA-211ENST00000514934 VEZTQ9HBM0 779 aa18.25■□□□□ 0.51
SGCA-211ENST00000514934 CEP126Q9P2H0 1117 aa18.25■□□□□ 0.51
SGCA-211ENST00000514934 ANGEL1Q9UNK9 670 aaKnown RBP18.25■□□□□ 0.51
SGCA-211ENST00000514934 HDAC5Q9UQL6 1122 aa18.25■□□□□ 0.51
SGCA-211ENST00000514934 FOCADQ5VW36 1801 aa18.25■□□□□ 0.51
SGCA-211ENST00000514934 CENPFP49454 3210 aa18.25■□□□□ 0.51
SGCA-211ENST00000514934 MAST2Q6P0Q8 1798 aa18.25■□□□□ 0.51
SGCA-211ENST00000514934 SALL1Q9NSC2 1324 aa18.24■□□□□ 0.51
SGCA-211ENST00000514934 PTPRFP10586 1907 aa18.24■□□□□ 0.51
SGCA-211ENST00000514934 MYO1BO43795 1136 aa18.24■□□□□ 0.51
SGCA-211ENST00000514934 NF2P35240 595 aa18.24■□□□□ 0.51
SGCA-211ENST00000514934 GJA5P36382 358 aa18.24■□□□□ 0.51
SGCA-211ENST00000514934 TM4SF4P48230 202 aa18.24■□□□□ 0.51
SGCA-211ENST00000514934 RBM5P52756 815 aaKnown RBP eCLIP18.24■□□□□ 0.51
SGCA-211ENST00000514934 POLA2Q14181 598 aa18.24■□□□□ 0.51
SGCA-211ENST00000514934 SPRYD7Q5W111 196 aa18.24■□□□□ 0.51
SGCA-211ENST00000514934 PHIPQ8WWQ0 1821 aa18.23■□□□□ 0.51
SGCA-211ENST00000514934 RFX7Q2KHR2 1363 aa18.23■□□□□ 0.51
SGCA-211ENST00000514934 GNAI2P04899 355 aa18.23■□□□□ 0.51
SGCA-211ENST00000514934 PRDX5P30044 214 aa18.23■□□□□ 0.51
SGCA-211ENST00000514934 TTLL12Q14166 644 aaPredicted RBP18.23■□□□□ 0.51
SGCA-211ENST00000514934 HHIPL2Q6UWX4 724 aa18.23■□□□□ 0.51
SGCA-211ENST00000514934 ARMC9Q7Z3E5 817 aa18.23■□□□□ 0.51
SGCA-211ENST00000514934 REM2Q8IYK8 340 aaPredicted RBP18.23■□□□□ 0.51
SGCA-211ENST00000514934 TEKT1Q969V4 418 aa18.23■□□□□ 0.51
SGCA-211ENST00000514934 TMEM39BQ9GZU3 492 aa18.23■□□□□ 0.51
SGCA-211ENST00000514934 PDS5AQ29RF7 1337 aaKnown RBP18.23■□□□□ 0.51
SGCA-211ENST00000514934 RPAP1Q9BWH6 1393 aaPredicted RBP18.22■□□□□ 0.51
SGCA-211ENST00000514934 TRPA1O75762 1119 aa18.22■□□□□ 0.51
SGCA-211ENST00000514934 CACNB3P54284 484 aa18.22■□□□□ 0.51
SGCA-211ENST00000514934 TIMM10P62072 90 aa18.22■□□□□ 0.51
SGCA-211ENST00000514934 TFCP2Q12800 502 aa18.22■□□□□ 0.51
SGCA-211ENST00000514934 RASGRF1Q13972 1273 aa18.22■□□□□ 0.51
SGCA-211ENST00000514934 CCDC102BQ68D86 513 aa18.22■□□□□ 0.51
SGCA-211ENST00000514934 WDR66Q8TBY9 1149 aa18.22■□□□□ 0.51
SGCA-211ENST00000514934 DAGLAQ9Y4D2 1042 aa18.22■□□□□ 0.51
SGCA-211ENST00000514934 SIPA1L1O43166 1804 aa18.21■□□□□ 0.51
SGCA-211ENST00000514934 A0A1B0GUL7 405 aa18.21■□□□□ 0.51
SGCA-211ENST00000514934 UNCXA6NJT0 531 aa18.21■□□□□ 0.51
SGCA-211ENST00000514934 SEMA3EO15041 775 aa18.21■□□□□ 0.51
SGCA-211ENST00000514934 ZBTB7BO15156 539 aaPredicted RBP18.21■□□□□ 0.51
SGCA-211ENST00000514934 DIXDC1Q155Q3 683 aa18.21■□□□□ 0.51
SGCA-211ENST00000514934 FKBP1CQ5VVH2 108 aa18.21■□□□□ 0.51
SGCA-211ENST00000514934 SSH3Q8TE77 659 aa18.21■□□□□ 0.51
SGCA-211ENST00000514934 ZNF384Q8TF68 577 aa18.21■□□□□ 0.51
SGCA-211ENST00000514934 ABHD8Q96I13 439 aa18.21■□□□□ 0.51
SGCA-211ENST00000514934 CFHR5Q9BXR6 569 aa18.21■□□□□ 0.51
SGCA-211ENST00000514934 TCP10L2B9ZVM9 353 aa18.2■□□□□ 0.5
SGCA-211ENST00000514934 FRAT2O75474 233 aaPredicted RBP18.2■□□□□ 0.5
SGCA-211ENST00000514934 TNFAIP1Q13829 316 aa18.2■□□□□ 0.5
SGCA-211ENST00000514934 SUPT20HL1Q3ZLR7 823 aa18.2■□□□□ 0.5
SGCA-211ENST00000514934 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.2■□□□□ 0.5
SGCA-211ENST00000514934 XAGE2Q96GT9 111 aa18.2■□□□□ 0.5
SGCA-211ENST00000514934 WNK4Q96J92 1243 aa18.2■□□□□ 0.5
SGCA-211ENST00000514934 R3HDMLQ9H3Y0 253 aa18.2■□□□□ 0.5
SGCA-211ENST00000514934 MAST3O60307 1309 aa18.2■□□□□ 0.5
SGCA-211ENST00000514934 MKRN3Q13064 507 aaKnown RBP18.19■□□□□ 0.5
SGCA-211ENST00000514934 FAM83AQ86UY5 434 aa18.19■□□□□ 0.5
SGCA-211ENST00000514934 GAKO14976 1311 aa18.19■□□□□ 0.5
SGCA-211ENST00000514934 ATRNL1Q5VV63 1379 aa18.18■□□□□ 0.5
SGCA-211ENST00000514934 PPP1R12BO60237 982 aaPredicted RBP18.18■□□□□ 0.5
SGCA-211ENST00000514934 ZBTB48P10074 688 aaPredicted RBP18.18■□□□□ 0.5
SGCA-211ENST00000514934 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.18■□□□□ 0.5
SGCA-211ENST00000514934 MCOLN1Q9GZU1 580 aa18.18■□□□□ 0.5
SGCA-211ENST00000514934 C1orf115Q9H7X2 142 aa18.18■□□□□ 0.5
SGCA-211ENST00000514934 DENND2AQ9ULE3 1009 aa18.18■□□□□ 0.5
SGCA-211ENST00000514934 ATAD5Q96QE3 1844 aa18.18■□□□□ 0.5
SGCA-211ENST00000514934 ZSWIM8A7E2V4 1837 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms