RNA–Protein interactions for RNA: ENST00000514660.1

NEDD9-215, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 473 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-215ENST00000514660 NKX2-3Q8TAU0 364 aa13.67□□□□□ -0.22
NEDD9-215ENST00000514660 GABRQQ9UN88 632 aa13.67□□□□□ -0.22
NEDD9-215ENST00000514660 DOCK3Q8IZD9 2030 aa13.66□□□□□ -0.22
NEDD9-215ENST00000514660 EVI5O60447 810 aa13.66□□□□□ -0.22
NEDD9-215ENST00000514660 TAF5LO75529 589 aa13.66□□□□□ -0.22
NEDD9-215ENST00000514660 SGPL1O95470 568 aa13.66□□□□□ -0.22
NEDD9-215ENST00000514660 GNRH1P01148 92 aa13.66□□□□□ -0.22
NEDD9-215ENST00000514660 PRKCZQ05513 592 aa13.66□□□□□ -0.22
NEDD9-215ENST00000514660 CHRNDQ07001 517 aa13.66□□□□□ -0.22
NEDD9-215ENST00000514660 GOLGA2Q08379 1002 aa13.66□□□□□ -0.22
NEDD9-215ENST00000514660 NEUROD2Q15784 382 aa13.66□□□□□ -0.22
NEDD9-215ENST00000514660 GPR153Q6NV75 609 aa13.66□□□□□ -0.22
NEDD9-215ENST00000514660 HELBQ8NG08 1087 aaPredicted RBP13.66□□□□□ -0.22
NEDD9-215ENST00000514660 DIS3LQ8TF46 1054 aaKnown RBP13.66□□□□□ -0.22
NEDD9-215ENST00000514660 MYPNQ86TC9 1320 aa13.65□□□□□ -0.22
NEDD9-215ENST00000514660 IL1R1P14778 569 aa13.65□□□□□ -0.22
NEDD9-215ENST00000514660 HOXD11P31277 338 aaPredicted RBP13.65□□□□□ -0.22
NEDD9-215ENST00000514660 BMP8BP34820 402 aa13.65□□□□□ -0.22
NEDD9-215ENST00000514660 MOGSQ13724 837 aa13.65□□□□□ -0.22
NEDD9-215ENST00000514660 KIF22Q14807 665 aa13.65□□□□□ -0.22
NEDD9-215ENST00000514660 GRIK5Q16478 980 aa13.65□□□□□ -0.22
NEDD9-215ENST00000514660 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.65□□□□□ -0.22
NEDD9-215ENST00000514660 CCDC146Q8IYE0 955 aa13.65□□□□□ -0.22
NEDD9-215ENST00000514660 ZKSCAN4Q969J2 545 aaPredicted RBP13.65□□□□□ -0.22
NEDD9-215ENST00000514660 ZMYND8Q9ULU4 1186 aaPredicted RBP13.65□□□□□ -0.22
NEDD9-215ENST00000514660 TCP10L2B9ZVM9 353 aa13.64□□□□□ -0.23
NEDD9-215ENST00000514660 MYO1BO43795 1136 aa13.64□□□□□ -0.23
NEDD9-215ENST00000514660 HSP90B1P14625 803 aaKnown RBP13.64□□□□□ -0.23
NEDD9-215ENST00000514660 CWF19L2Q2TBE0 894 aaKnown RBP13.64□□□□□ -0.23
NEDD9-215ENST00000514660 RAET1EQ8TD07 263 aa13.64□□□□□ -0.23
NEDD9-215ENST00000514660 MBIPQ9NS73 344 aa13.64□□□□□ -0.23
NEDD9-215ENST00000514660 MAP3K2Q9Y2U5 619 aa13.64□□□□□ -0.23
NEDD9-215ENST00000514660 VCANP13611 3396 aa13.64□□□□□ -0.23
NEDD9-215ENST00000514660 ELL2O00472 640 aaPredicted RBP13.63□□□□□ -0.23
NEDD9-215ENST00000514660 ZBTB22O15209 634 aa13.63□□□□□ -0.23
NEDD9-215ENST00000514660 CETPP11597 493 aa13.63□□□□□ -0.23
NEDD9-215ENST00000514660 ITGA6P23229 1130 aa13.63□□□□□ -0.23
NEDD9-215ENST00000514660 RBM5P52756 815 aaKnown RBP eCLIP13.63□□□□□ -0.23
NEDD9-215ENST00000514660 CACNB3P54284 484 aa13.63□□□□□ -0.23
NEDD9-215ENST00000514660 FKBP1AP62942 108 aaKnown RBP13.63□□□□□ -0.23
NEDD9-215ENST00000514660 LRIT3Q3SXY7 679 aa13.63□□□□□ -0.23
NEDD9-215ENST00000514660 C15orf52Q6ZUT6 534 aaKnown RBP13.63□□□□□ -0.23
NEDD9-215ENST00000514660 PAWRQ96IZ0 340 aaKnown RBP13.63□□□□□ -0.23
NEDD9-215ENST00000514660 GUCD1Q96NT3 240 aa13.63□□□□□ -0.23
NEDD9-215ENST00000514660 ZCCHC17Q9NP64 241 aaKnown RBP13.63□□□□□ -0.23
NEDD9-215ENST00000514660 H7C1W4 665 aa13.62□□□□□ -0.23
NEDD9-215ENST00000514660 FMNL1O95466 1100 aaPredicted RBP13.62□□□□□ -0.23
NEDD9-215ENST00000514660 ELNP15502 786 aa13.62□□□□□ -0.23
NEDD9-215ENST00000514660 SYN1P17600 705 aa13.62□□□□□ -0.23
NEDD9-215ENST00000514660 CASP7P55210 303 aa13.62□□□□□ -0.23
NEDD9-215ENST00000514660 ERO1BQ86YB8 467 aa13.62□□□□□ -0.23
NEDD9-215ENST00000514660 DEFB118Q96PH6 123 aa13.62□□□□□ -0.23
NEDD9-215ENST00000514660 ANKRD2Q9GZV1 360 aa13.62□□□□□ -0.23
NEDD9-215ENST00000514660 CRISPLD2Q9H0B8 497 aa13.62□□□□□ -0.23
NEDD9-215ENST00000514660 SPTBN5Q9NRC6 3674 aaKnown RBP13.62□□□□□ -0.23
NEDD9-215ENST00000514660 BCRP11274 1271 aa13.61□□□□□ -0.23
NEDD9-215ENST00000514660 IGHMBP2P38935 993 aaKnown RBP13.61□□□□□ -0.23
NEDD9-215ENST00000514660 MAGEA10P43363 369 aaPredicted RBP13.61□□□□□ -0.23
NEDD9-215ENST00000514660 LMOD3Q0VAK6 560 aa13.61□□□□□ -0.23
NEDD9-215ENST00000514660 UBE3BQ7Z3V4 1068 aa13.61□□□□□ -0.23
NEDD9-215ENST00000514660 DZIP1LQ8IYY4 767 aaKnown RBP13.61□□□□□ -0.23
NEDD9-215ENST00000514660 C7orf61Q8IZ16 206 aa13.61□□□□□ -0.23
NEDD9-215ENST00000514660 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.61□□□□□ -0.23
NEDD9-215ENST00000514660 PNNQ9H307 717 aaKnown RBP13.61□□□□□ -0.23
NEDD9-215ENST00000514660 BIN2Q9UBW5 565 aaPredicted RBP13.61□□□□□ -0.23
NEDD9-215ENST00000514660 CSADQ9Y600 493 aa13.61□□□□□ -0.23
NEDD9-215ENST00000514660 PDHXO00330 501 aa13.6□□□□□ -0.23
NEDD9-215ENST00000514660 CSF1RP07333 972 aa13.6□□□□□ -0.23
NEDD9-215ENST00000514660 ZNF853P0CG23 659 aa13.6□□□□□ -0.23
NEDD9-215ENST00000514660 INPP5BP32019 993 aa13.6□□□□□ -0.23
NEDD9-215ENST00000514660 PPIL2Q13356 520 aa13.6□□□□□ -0.23
NEDD9-215ENST00000514660 SNAPC2Q13487 334 aa13.6□□□□□ -0.23
NEDD9-215ENST00000514660 C8orf58Q8NAV2 365 aa13.6□□□□□ -0.23
NEDD9-215ENST00000514660 PAK6Q9NQU5 681 aaPredicted RBP13.6□□□□□ -0.23
NEDD9-215ENST00000514660 PRDM6Q9NQX0 595 aa13.6□□□□□ -0.23
NEDD9-215ENST00000514660 RAPGEFL1Q9UHV5 662 aa13.6□□□□□ -0.23
NEDD9-215ENST00000514660 EYSQ5T1H1 3165 aa13.6□□□□□ -0.23
NEDD9-215ENST00000514660 PI4KAP2A4QPH2 592 aa13.59□□□□□ -0.23
NEDD9-215ENST00000514660 NEURL1BA8MQ27 555 aa13.59□□□□□ -0.23
NEDD9-215ENST00000514660 TFRCP02786 760 aaKnown RBP13.59□□□□□ -0.23
NEDD9-215ENST00000514660 INHAP05111 366 aa13.59□□□□□ -0.23
NEDD9-215ENST00000514660 CYP2C8P10632 490 aa13.59□□□□□ -0.23
NEDD9-215ENST00000514660 UBXN2AP68543 259 aa13.59□□□□□ -0.23
NEDD9-215ENST00000514660 GPAT2Q6NUI2 795 aa13.59□□□□□ -0.23
NEDD9-215ENST00000514660 ANKRD23Q86SG2 305 aa13.59□□□□□ -0.23
NEDD9-215ENST00000514660 PI4KAP1Q8N8J0 262 aa13.59□□□□□ -0.23
NEDD9-215ENST00000514660 WRNIP1Q96S55 665 aa13.59□□□□□ -0.23
NEDD9-215ENST00000514660 PLA2G12BQ9BX93 195 aa13.59□□□□□ -0.23
NEDD9-215ENST00000514660 TTF2Q9UNY4 1162 aaKnown RBP13.59□□□□□ -0.23
NEDD9-215ENST00000514660 FAM205AQ6ZU69 1335 aa13.59□□□□□ -0.23
NEDD9-215ENST00000514660 ADCY3O60266 1144 aa13.58□□□□□ -0.24
NEDD9-215ENST00000514660 HOXD10P28358 340 aa13.58□□□□□ -0.24
NEDD9-215ENST00000514660 KCNJ4P48050 445 aa13.58□□□□□ -0.24
NEDD9-215ENST00000514660 FLT3LGP49771 235 aa13.58□□□□□ -0.24
NEDD9-215ENST00000514660 TNFAIP1Q13829 316 aa13.58□□□□□ -0.24
NEDD9-215ENST00000514660 TDHQ8IZJ6 230 aa13.58□□□□□ -0.24
NEDD9-215ENST00000514660 SLAIN1Q8ND83 568 aa13.58□□□□□ -0.24
NEDD9-215ENST00000514660 DDX60LQ5H9U9 1706 aaKnown RBP13.58□□□□□ -0.24
NEDD9-215ENST00000514660 POTEB2H3BUK9 544 aa13.57□□□□□ -0.24
NEDD9-215ENST00000514660 CRKP46108 304 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms