RNA–Protein interactions for RNA: ENST00000514611.1

PFDN1-206, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-206ENST00000514611 SIL1Q9H173 461 aa16.66■□□□□ 0.26
PFDN1-206ENST00000514611 KIF16BQ96L93 1317 aa16.66■□□□□ 0.26
PFDN1-206ENST00000514611 RARSP54136 660 aaKnown RBP16.65■□□□□ 0.26
PFDN1-206ENST00000514611 CACNB3P54284 484 aa16.65■□□□□ 0.26
PFDN1-206ENST00000514611 TNFAIP1Q13829 316 aa16.65■□□□□ 0.26
PFDN1-206ENST00000514611 CTU1Q7Z7A3 348 aaKnown RBP16.65■□□□□ 0.26
PFDN1-206ENST00000514611 TBC1D22AQ8WUA7 517 aa16.65■□□□□ 0.26
PFDN1-206ENST00000514611 SLC10A4Q96EP9 437 aa16.65■□□□□ 0.26
PFDN1-206ENST00000514611 TEPSINQ96N21 525 aa16.65■□□□□ 0.26
PFDN1-206ENST00000514611 MEIS3Q99687 375 aa16.65■□□□□ 0.26
PFDN1-206ENST00000514611 API5Q9BZZ5 524 aaKnown RBP16.65■□□□□ 0.26
PFDN1-206ENST00000514611 TMEM39BQ9GZU3 492 aa16.65■□□□□ 0.26
PFDN1-206ENST00000514611 R3HDMLQ9H3Y0 253 aa16.65■□□□□ 0.26
PFDN1-206ENST00000514611 LRRFIP2Q9Y608 721 aaKnown RBP16.65■□□□□ 0.26
PFDN1-206ENST00000514611 USP2O75604 605 aaPredicted RBP16.64■□□□□ 0.25
PFDN1-206ENST00000514611 SLC5A1P13866 664 aa16.64■□□□□ 0.25
PFDN1-206ENST00000514611 GJA5P36382 358 aa16.64■□□□□ 0.25
PFDN1-206ENST00000514611 OTOFQ9HC10 1997 aa16.64■□□□□ 0.25
PFDN1-206ENST00000514611 GPR25O00155 361 aa16.63■□□□□ 0.25
PFDN1-206ENST00000514611 ZBTB48P10074 688 aaPredicted RBP16.63■□□□□ 0.25
PFDN1-206ENST00000514611 IREB2P48200 963 aaKnown RBP16.63■□□□□ 0.25
PFDN1-206ENST00000514611 LPIN2Q92539 896 aa16.63■□□□□ 0.25
PFDN1-206ENST00000514611 TEKT1Q969V4 418 aa16.63■□□□□ 0.25
PFDN1-206ENST00000514611 PA2G4Q9UQ80 394 aaKnown RBP16.63■□□□□ 0.25
PFDN1-206ENST00000514611 MANSC4A6NHS7 340 aaPredicted RBP16.62■□□□□ 0.25
PFDN1-206ENST00000514611 RGS19P49795 217 aa16.62■□□□□ 0.25
PFDN1-206ENST00000514611 IFNL1Q8IU54 200 aa16.62■□□□□ 0.25
PFDN1-206ENST00000514611 ANKRD13AQ8IZ07 590 aa16.62■□□□□ 0.25
PFDN1-206ENST00000514611 ELP3Q9H9T3 547 aa16.62■□□□□ 0.25
PFDN1-206ENST00000514611 IGF2BP3O00425 579 aaKnown RBP eCLIP16.61■□□□□ 0.25
PFDN1-206ENST00000514611 CIAO1O76071 339 aa16.61■□□□□ 0.25
PFDN1-206ENST00000514611 TNNI2P48788 182 aa16.61■□□□□ 0.25
PFDN1-206ENST00000514611 HDLBPQ00341 1268 aaKnown RBP16.61■□□□□ 0.25
PFDN1-206ENST00000514611 MLLT1Q03111 559 aaPredicted RBP16.61■□□□□ 0.25
PFDN1-206ENST00000514611 ATP2B3Q16720 1220 aa16.61■□□□□ 0.25
PFDN1-206ENST00000514611 APOBEC3HQ6NTF7 200 aaKnown RBP16.61■□□□□ 0.25
PFDN1-206ENST00000514611 ZDHHC15Q96MV8 337 aa16.61■□□□□ 0.25
PFDN1-206ENST00000514611 CFHR5Q9BXR6 569 aa16.61■□□□□ 0.25
PFDN1-206ENST00000514611 TNNQ9UQP3 1299 aa16.61■□□□□ 0.25
PFDN1-206ENST00000514611 LAMB1P07942 1786 aa16.6■□□□□ 0.25
PFDN1-206ENST00000514611 UNCXA6NJT0 531 aa16.6■□□□□ 0.25
PFDN1-206ENST00000514611 SOX10P56693 466 aa16.6■□□□□ 0.25
PFDN1-206ENST00000514611 NOM1Q5C9Z4 860 aaKnown RBP16.6■□□□□ 0.25
PFDN1-206ENST00000514611 CNKSR2Q8WXI2 1034 aa16.6■□□□□ 0.25
PFDN1-206ENST00000514611 OPTNQ96CV9 577 aa16.6■□□□□ 0.25
PFDN1-206ENST00000514611 MAST3O60307 1309 aa16.6■□□□□ 0.25
PFDN1-206ENST00000514611 VGLL4Q14135 290 aa16.59■□□□□ 0.25
PFDN1-206ENST00000514611 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.59■□□□□ 0.25
PFDN1-206ENST00000514611 CEP126Q9P2H0 1117 aa16.59■□□□□ 0.25
PFDN1-206ENST00000514611 FBXO3Q9UK99 471 aa16.59■□□□□ 0.25
PFDN1-206ENST00000514611 HPS5Q9UPZ3 1129 aa16.59■□□□□ 0.25
PFDN1-206ENST00000514611 SUGT1Q9Y2Z0 365 aa16.59■□□□□ 0.25
PFDN1-206ENST00000514611 HTTP42858 3142 aa16.59■□□□□ 0.25
PFDN1-206ENST00000514611 FKTNO75072 461 aa16.58■□□□□ 0.24
PFDN1-206ENST00000514611 ALDH1A1P00352 501 aa16.58■□□□□ 0.24
PFDN1-206ENST00000514611 TRIM27P14373 513 aa16.58■□□□□ 0.24
PFDN1-206ENST00000514611 PRDX5P30044 214 aa16.58■□□□□ 0.24
PFDN1-206ENST00000514611 ADORA1P30542 326 aa16.58■□□□□ 0.24
PFDN1-206ENST00000514611 IL15P40933 162 aaPredicted RBP16.58■□□□□ 0.24
PFDN1-206ENST00000514611 PHKA1P46020 1223 aa16.58■□□□□ 0.24
PFDN1-206ENST00000514611 DIXDC1Q155Q3 683 aa16.58■□□□□ 0.24
PFDN1-206ENST00000514611 INTS3Q68E01 1043 aaKnown RBP16.58■□□□□ 0.24
PFDN1-206ENST00000514611 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.58■□□□□ 0.24
PFDN1-206ENST00000514611 WDR66Q8TBY9 1149 aa16.58■□□□□ 0.24
PFDN1-206ENST00000514611 COPRSQ9NQ92 184 aa16.58■□□□□ 0.24
PFDN1-206ENST00000514611 TMOD2Q9NZR1 351 aa16.58■□□□□ 0.24
PFDN1-206ENST00000514611 BCAR3O75815 825 aa16.57■□□□□ 0.24
PFDN1-206ENST00000514611 INHBEP58166 350 aa16.57■□□□□ 0.24
PFDN1-206ENST00000514611 HHIPL2Q6UWX4 724 aa16.57■□□□□ 0.24
PFDN1-206ENST00000514611 ARHGAP45Q92619 1136 aa16.57■□□□□ 0.24
PFDN1-206ENST00000514611 PTPN18Q99952 460 aa16.57■□□□□ 0.24
PFDN1-206ENST00000514611 MRIQ9BWK5 157 aa16.57■□□□□ 0.24
PFDN1-206ENST00000514611 MYH13Q9UKX3 1938 aa16.57■□□□□ 0.24
PFDN1-206ENST00000514611 SRGAP3O43295 1099 aa16.56■□□□□ 0.24
PFDN1-206ENST00000514611 FAM83AQ86UY5 434 aa16.56■□□□□ 0.24
PFDN1-206ENST00000514611 DAGLAQ9Y4D2 1042 aa16.56■□□□□ 0.24
PFDN1-206ENST00000514611 RPAP1Q9BWH6 1393 aaPredicted RBP16.55■□□□□ 0.24
PFDN1-206ENST00000514611 TESPA1A2RU30 521 aaPredicted RBP16.55■□□□□ 0.24
PFDN1-206ENST00000514611 MAP3K9P80192 1104 aa16.55■□□□□ 0.24
PFDN1-206ENST00000514611 CRHR2Q13324 411 aa16.55■□□□□ 0.24
PFDN1-206ENST00000514611 PKN2Q16513 984 aaKnown RBP16.55■□□□□ 0.24
PFDN1-206ENST00000514611 FRAT1Q92837 279 aaPredicted RBP16.55■□□□□ 0.24
PFDN1-206ENST00000514611 OTUD5Q96G74 571 aa16.55■□□□□ 0.24
PFDN1-206ENST00000514611 MS4A4AQ96JQ5 239 aa16.55■□□□□ 0.24
PFDN1-206ENST00000514611 WRNIP1Q96S55 665 aa16.55■□□□□ 0.24
PFDN1-206ENST00000514611 HDAC5Q9UQL6 1122 aa16.55■□□□□ 0.24
PFDN1-206ENST00000514611 CSADQ9Y600 493 aa16.55■□□□□ 0.24
PFDN1-206ENST00000514611 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.55■□□□□ 0.24
PFDN1-206ENST00000514611 GNAI3P08754 354 aa16.54■□□□□ 0.24
PFDN1-206ENST00000514611 NFIAQ12857 509 aa16.54■□□□□ 0.24
PFDN1-206ENST00000514611 FKBP1CQ5VVH2 108 aa16.54■□□□□ 0.24
PFDN1-206ENST00000514611 CCDC102BQ68D86 513 aa16.54■□□□□ 0.24
PFDN1-206ENST00000514611 FBXO46Q6PJ61 603 aaPredicted RBP16.54■□□□□ 0.24
PFDN1-206ENST00000514611 ATF7IPQ6VMQ6 1270 aa16.54■□□□□ 0.24
PFDN1-206ENST00000514611 BRI3BPQ8WY22 251 aa16.54■□□□□ 0.24
PFDN1-206ENST00000514611 CLUAP1Q96AJ1 413 aa16.54■□□□□ 0.24
PFDN1-206ENST00000514611 GNL3LQ9NVN8 582 aaKnown RBP16.54■□□□□ 0.24
PFDN1-206ENST00000514611 DENND2AQ9ULE3 1009 aa16.54■□□□□ 0.24
PFDN1-206ENST00000514611 SNCAIPQ9Y6H5 919 aa16.54■□□□□ 0.24
PFDN1-206ENST00000514611 CENPFP49454 3210 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms