RNA–Protein interactions for RNA: ENST00000514335.1

NIPBL-208, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 2,948 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-208ENST00000514335 KIF11P52732 1056 aa8.36□□□□□ -1.07
NIPBL-208ENST00000514335 TMEM62Q0P6H9 643 aa8.36□□□□□ -1.07
NIPBL-208ENST00000514335 SLC7A5P1Q8MH63 180 aa8.36□□□□□ -1.07
NIPBL-208ENST00000514335 JDP2Q8WYK2 163 aa8.36□□□□□ -1.07
NIPBL-208ENST00000514335 RMDN2Q96LZ7 410 aa8.36□□□□□ -1.07
NIPBL-208ENST00000514335 NELL2Q99435 816 aa8.36□□□□□ -1.07
NIPBL-208ENST00000514335 SPATS2LQ9NUQ6 558 aaKnown RBP8.36□□□□□ -1.07
NIPBL-208ENST00000514335 DMGDHQ9UI17 866 aaKnown RBP8.36□□□□□ -1.07
NIPBL-208ENST00000514335 TMA7Q9Y2S6 64 aaKnown RBP8.36□□□□□ -1.07
NIPBL-208ENST00000514335 FAM177BA6PVY3 158 aa8.36□□□□□ -1.07
NIPBL-208ENST00000514335 FGAP02671 866 aa8.36□□□□□ -1.07
NIPBL-208ENST00000514335 SH3BGRP55822 239 aaPredicted RBP8.36□□□□□ -1.07
NIPBL-208ENST00000514335 ADCY1Q08828 1119 aa8.36□□□□□ -1.07
NIPBL-208ENST00000514335 ZNF772Q68DY9 489 aaPredicted RBP8.36□□□□□ -1.07
NIPBL-208ENST00000514335 RASGRP2Q7LDG7 609 aa8.36□□□□□ -1.07
NIPBL-208ENST00000514335 LILRB1Q8NHL6 650 aaPredicted RBP8.36□□□□□ -1.07
NIPBL-208ENST00000514335 EXOC1Q9NV70 894 aa8.36□□□□□ -1.07
NIPBL-208ENST00000514335 C6orf203Q9P0P8 240 aaPredicted RBP8.36□□□□□ -1.07
NIPBL-208ENST00000514335 CFAP45Q9UL16 551 aa8.36□□□□□ -1.07
NIPBL-208ENST00000514335 SPO11Q9Y5K1 396 aa8.36□□□□□ -1.07
NIPBL-208ENST00000514335 COL24A1Q17RW2 1714 aa8.35□□□□□ -1.07
NIPBL-208ENST00000514335 C19orf81C9J6K1 198 aa8.35□□□□□ -1.07
NIPBL-208ENST00000514335 KCNA6P17658 529 aa8.35□□□□□ -1.07
NIPBL-208ENST00000514335 GTF2F1P35269 517 aaKnown RBP eCLIP8.35□□□□□ -1.07
NIPBL-208ENST00000514335 EIF2B5Q13144 721 aaKnown RBP8.35□□□□□ -1.07
NIPBL-208ENST00000514335 FILIP1LQ4L180 1135 aa8.35□□□□□ -1.07
NIPBL-208ENST00000514335 SNX32Q86XE0 403 aa8.35□□□□□ -1.07
NIPBL-208ENST00000514335 C3orf20Q8ND61 904 aa8.35□□□□□ -1.07
NIPBL-208ENST00000514335 APPL2Q8NEU8 664 aa8.35□□□□□ -1.07
NIPBL-208ENST00000514335 SH3TC2Q8TF17 1288 aa8.35□□□□□ -1.07
NIPBL-208ENST00000514335 SH3KBP1Q96B97 665 aa8.35□□□□□ -1.07
NIPBL-208ENST00000514335 ATP8A1Q9Y2Q0 1164 aa8.35□□□□□ -1.07
NIPBL-208ENST00000514335 RRP15Q9Y3B9 282 aaKnown RBP8.35□□□□□ -1.07
NIPBL-208ENST00000514335 UBAP1LF5GYI3 381 aa8.35□□□□□ -1.07
NIPBL-208ENST00000514335 GTPBP6O43824 516 aaPredicted RBP8.35□□□□□ -1.07
NIPBL-208ENST00000514335 ZNF189O75820 626 aaPredicted RBP8.35□□□□□ -1.07
NIPBL-208ENST00000514335 SMC2O95347 1197 aa8.35□□□□□ -1.07
NIPBL-208ENST00000514335 ADD2P35612 726 aa8.35□□□□□ -1.07
NIPBL-208ENST00000514335 GUCY1B3Q02153 619 aa8.35□□□□□ -1.07
NIPBL-208ENST00000514335 SHROOM1Q2M3G4 852 aaPredicted RBP8.35□□□□□ -1.07
NIPBL-208ENST00000514335 ZNF449Q6P9G9 518 aa8.35□□□□□ -1.07
NIPBL-208ENST00000514335 ANKK1Q8NFD2 765 aa8.35□□□□□ -1.07
NIPBL-208ENST00000514335 GPT2Q8TD30 523 aa8.35□□□□□ -1.07
NIPBL-208ENST00000514335 SYAP1Q96A49 352 aaPredicted RBP8.35□□□□□ -1.07
NIPBL-208ENST00000514335 BACH2Q9BYV9 841 aa8.35□□□□□ -1.07
NIPBL-208ENST00000514335 ABCG4Q9H172 646 aa8.35□□□□□ -1.07
NIPBL-208ENST00000514335 AASDHPPTQ9NRN7 309 aa8.35□□□□□ -1.07
NIPBL-208ENST00000514335 TBX22Q9Y458 520 aa8.35□□□□□ -1.07
NIPBL-208ENST00000514335 A0A0B4J203 849 aa8.34□□□□□ -1.07
NIPBL-208ENST00000514335 FOXD2O60548 495 aaPredicted RBP8.34□□□□□ -1.07
NIPBL-208ENST00000514335 MSL3P1P0C860 447 aa8.34□□□□□ -1.07
NIPBL-208ENST00000514335 CYP2C19P33261 490 aa8.34□□□□□ -1.07
NIPBL-208ENST00000514335 SLMAPQ14BN4 828 aa8.34□□□□□ -1.07
NIPBL-208ENST00000514335 FIP1L1Q6UN15 594 aaKnown RBP8.34□□□□□ -1.07
NIPBL-208ENST00000514335 IWS1Q96ST2 819 aa8.34□□□□□ -1.07
NIPBL-208ENST00000514335 TBC1D2Q9BYX2 928 aa8.34□□□□□ -1.07
NIPBL-208ENST00000514335 ACAD8Q9UKU7 415 aa8.34□□□□□ -1.07
NIPBL-208ENST00000514335 NRXN3Q9Y4C0 1643 aa8.34□□□□□ -1.07
NIPBL-208ENST00000514335 ATG7O95352 703 aa8.34□□□□□ -1.07
NIPBL-208ENST00000514335 HARSP12081 509 aaKnown RBP8.34□□□□□ -1.07
NIPBL-208ENST00000514335 CHMLP26374 656 aa8.34□□□□□ -1.07
NIPBL-208ENST00000514335 ERCC5P28715 1186 aaPredicted RBP8.34□□□□□ -1.07
NIPBL-208ENST00000514335 PIP4K2BP78356 416 aa8.34□□□□□ -1.07
NIPBL-208ENST00000514335 KRT72Q14CN4 511 aa8.34□□□□□ -1.07
NIPBL-208ENST00000514335 HOOK3Q86VS8 718 aa8.34□□□□□ -1.07
NIPBL-208ENST00000514335 ANKRD18AQ8IVF6 992 aa8.34□□□□□ -1.07
NIPBL-208ENST00000514335 GSDMBQ8TAX9 411 aa8.34□□□□□ -1.07
NIPBL-208ENST00000514335 PARD3BQ8TEW8 1205 aa8.34□□□□□ -1.07
NIPBL-208ENST00000514335 FRS2Q8WU20 508 aa8.34□□□□□ -1.07
NIPBL-208ENST00000514335 IPCEF1Q8WWN9 437 aaPredicted RBP8.34□□□□□ -1.07
NIPBL-208ENST00000514335 UROC1Q96N76 676 aa8.34□□□□□ -1.07
NIPBL-208ENST00000514335 KANK1Q14678 1352 aa8.33□□□□□ -1.08
NIPBL-208ENST00000514335 SGTAO43765 313 aa8.33□□□□□ -1.08
NIPBL-208ENST00000514335 C21orf2O43822 256 aa8.33□□□□□ -1.08
NIPBL-208ENST00000514335 SRGNP10124 158 aa8.33□□□□□ -1.08
NIPBL-208ENST00000514335 GNAT2P19087 354 aa8.33□□□□□ -1.08
NIPBL-208ENST00000514335 EIF4A2Q14240 407 aaKnown RBP8.33□□□□□ -1.08
NIPBL-208ENST00000514335 CFAP58Q5T655 872 aa8.33□□□□□ -1.08
NIPBL-208ENST00000514335 LEKR1Q6ZMV7 388 aa8.33□□□□□ -1.08
NIPBL-208ENST00000514335 CCDC186Q7Z3E2 898 aa8.33□□□□□ -1.08
NIPBL-208ENST00000514335 DZIP1Q86YF9 867 aaKnown RBP8.33□□□□□ -1.08
NIPBL-208ENST00000514335 ANKRD24Q8TF21 1146 aa8.33□□□□□ -1.08
NIPBL-208ENST00000514335 GSDMAQ96QA5 445 aa8.33□□□□□ -1.08
NIPBL-208ENST00000514335 MMADHCQ9H3L0 296 aaPredicted RBP8.33□□□□□ -1.08
NIPBL-208ENST00000514335 BCL2L12Q9HB09 334 aa8.33□□□□□ -1.08
NIPBL-208ENST00000514335 TTF2Q9UNY4 1162 aaKnown RBP8.33□□□□□ -1.08
NIPBL-208ENST00000514335 ROCK1Q13464 1354 aa8.33□□□□□ -1.08
NIPBL-208ENST00000514335 TPM1P09493 284 aa8.33□□□□□ -1.08
NIPBL-208ENST00000514335 MATR3P43243 847 aaKnown RBP eCLIP8.33□□□□□ -1.08
NIPBL-208ENST00000514335 TMED1Q13445 227 aa8.33□□□□□ -1.08
NIPBL-208ENST00000514335 PARP10Q53GL7 1025 aa8.33□□□□□ -1.08
NIPBL-208ENST00000514335 CCDC80Q76M96 950 aa8.33□□□□□ -1.08
NIPBL-208ENST00000514335 SPATA21Q7Z572 469 aa8.33□□□□□ -1.08
NIPBL-208ENST00000514335 GIPC2Q8TF65 315 aa8.33□□□□□ -1.08
NIPBL-208ENST00000514335 CLIC5Q9NZA1 410 aa8.33□□□□□ -1.08
NIPBL-208ENST00000514335 COL4A3BPQ9Y5P4 624 aa8.33□□□□□ -1.08
NIPBL-208ENST00000514335 ADGRB2O60241 1585 aa8.33□□□□□ -1.08
NIPBL-208ENST00000514335 ATP6V1G1O75348 118 aa8.33□□□□□ -1.08
NIPBL-208ENST00000514335 E2F6O75461 281 aa8.33□□□□□ -1.08
NIPBL-208ENST00000514335 DEUP1Q05D60 604 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms