RNA–Protein interactions for RNA: ENST00000513996.5

HERC4-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 3

Gene HERC4, Length 944 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-214ENST00000513996 DZIP1LQ8IYY4 767 aaKnown RBP10.87□□□□□ -0.67
HERC4-214ENST00000513996 TTF2Q9UNY4 1162 aaKnown RBP10.87□□□□□ -0.67
HERC4-214ENST00000513996 UBE2Q2LH0YL09 131 aa10.86□□□□□ -0.67
HERC4-214ENST00000513996 PHKA1P46020 1223 aa10.86□□□□□ -0.67
HERC4-214ENST00000513996 TIMM10P62072 90 aa10.86□□□□□ -0.67
HERC4-214ENST00000513996 ATP2B3Q16720 1220 aa10.86□□□□□ -0.67
HERC4-214ENST00000513996 RGMBQ6NW40 437 aa10.86□□□□□ -0.67
HERC4-214ENST00000513996 PANK1Q8TE04 598 aa10.86□□□□□ -0.67
HERC4-214ENST00000513996 FZD1Q9UP38 647 aa10.86□□□□□ -0.67
HERC4-214ENST00000513996 FRAT2O75474 233 aaPredicted RBP10.85□□□□□ -0.67
HERC4-214ENST00000513996 HSPA8P11142 646 aaKnown RBP10.85□□□□□ -0.67
HERC4-214ENST00000513996 CRKP46108 304 aa10.85□□□□□ -0.67
HERC4-214ENST00000513996 ZNF157P51786 506 aaPredicted RBP10.85□□□□□ -0.67
HERC4-214ENST00000513996 RBM5P52756 815 aaKnown RBP eCLIP10.85□□□□□ -0.67
HERC4-214ENST00000513996 LBX1P52954 281 aa10.85□□□□□ -0.67
HERC4-214ENST00000513996 ATP8B2P98198 1209 aa10.85□□□□□ -0.67
HERC4-214ENST00000513996 MAP2K1Q02750 393 aaPredicted RBP10.85□□□□□ -0.67
HERC4-214ENST00000513996 TFCP2Q12800 502 aa10.85□□□□□ -0.67
HERC4-214ENST00000513996 IFNLR1Q8IU57 520 aaPredicted RBP10.85□□□□□ -0.67
HERC4-214ENST00000513996 APOBEC3FQ8IUX4 373 aaKnown RBP10.85□□□□□ -0.67
HERC4-214ENST00000513996 DEFB129Q9H1M3 183 aa10.85□□□□□ -0.67
HERC4-214ENST00000513996 TDRD3Q9H7E2 651 aaKnown RBP10.85□□□□□ -0.67
HERC4-214ENST00000513996 C1orf115Q9H7X2 142 aa10.85□□□□□ -0.67
HERC4-214ENST00000513996 ZNF70Q9UC06 446 aaPredicted RBP10.85□□□□□ -0.67
HERC4-214ENST00000513996 CTCFP49711 727 aaPredicted RBP10.84□□□□□ -0.67
HERC4-214ENST00000513996 KIF23Q02241 960 aaPredicted RBP10.84□□□□□ -0.67
HERC4-214ENST00000513996 PRKG1Q13976 671 aa10.84□□□□□ -0.67
HERC4-214ENST00000513996 IFFO2Q5TF58 517 aa10.84□□□□□ -0.67
HERC4-214ENST00000513996 TBC1D22AQ8WUA7 517 aa10.84□□□□□ -0.67
HERC4-214ENST00000513996 AIDAQ96BJ3 306 aa10.84□□□□□ -0.67
HERC4-214ENST00000513996 TSKSQ9UJT2 592 aa10.84□□□□□ -0.67
HERC4-214ENST00000513996 SERPINA10Q9UK55 444 aa10.84□□□□□ -0.67
HERC4-214ENST00000513996 COL1A1P02452 1464 aaPredicted RBP10.84□□□□□ -0.67
HERC4-214ENST00000513996 A0A1B0GUL7 405 aa10.83□□□□□ -0.68
HERC4-214ENST00000513996 SLC10A3P09131 477 aa10.83□□□□□ -0.68
HERC4-214ENST00000513996 FKBP1BP68106 108 aa10.83□□□□□ -0.68
HERC4-214ENST00000513996 NOGQ13253 232 aa10.83□□□□□ -0.68
HERC4-214ENST00000513996 RASA3Q14644 834 aa10.83□□□□□ -0.68
HERC4-214ENST00000513996 NBPF12Q5TAG4 269 aaPredicted RBP10.83□□□□□ -0.68
HERC4-214ENST00000513996 CCDC102BQ68D86 513 aa10.83□□□□□ -0.68
HERC4-214ENST00000513996 APOBEC3HQ6NTF7 200 aaKnown RBP10.83□□□□□ -0.68
HERC4-214ENST00000513996 RASAL3Q86YV0 1011 aa10.83□□□□□ -0.68
HERC4-214ENST00000513996 ITPRIPQ8IWB1 547 aa10.83□□□□□ -0.68
HERC4-214ENST00000513996 CDAN1Q8IWY9 1227 aa10.83□□□□□ -0.68
HERC4-214ENST00000513996 FTSJ3Q8IY81 847 aaKnown RBP10.83□□□□□ -0.68
HERC4-214ENST00000513996 SSH3Q8TE77 659 aa10.83□□□□□ -0.68
HERC4-214ENST00000513996 CCDC102AQ96A19 550 aa10.83□□□□□ -0.68
HERC4-214ENST00000513996 XAGE2Q96GT9 111 aa10.83□□□□□ -0.68
HERC4-214ENST00000513996 MRIQ9BWK5 157 aa10.83□□□□□ -0.68
HERC4-214ENST00000513996 VEZTQ9HBM0 779 aa10.83□□□□□ -0.68
HERC4-214ENST00000513996 PRDM10Q9NQV6 1147 aa10.83□□□□□ -0.68
HERC4-214ENST00000513996 MYO1BO43795 1136 aa10.82□□□□□ -0.68
HERC4-214ENST00000513996 PRKAR2AP13861 404 aaKnown RBP10.82□□□□□ -0.68
HERC4-214ENST00000513996 PRDX5P30044 214 aa10.82□□□□□ -0.68
HERC4-214ENST00000513996 HDLBPQ00341 1268 aaKnown RBP10.82□□□□□ -0.68
HERC4-214ENST00000513996 TTLL12Q14166 644 aaPredicted RBP10.82□□□□□ -0.68
HERC4-214ENST00000513996 LDLRAD1Q5T700 205 aa10.82□□□□□ -0.68
HERC4-214ENST00000513996 WDR66Q8TBY9 1149 aa10.82□□□□□ -0.68
HERC4-214ENST00000513996 CSRNP1Q96S65 589 aa10.82□□□□□ -0.68
HERC4-214ENST00000513996 SUGT1Q9Y2Z0 365 aa10.82□□□□□ -0.68
HERC4-214ENST00000513996 THSD7BQ9C0I4 1608 aa10.82□□□□□ -0.68
HERC4-214ENST00000513996 TCP10L2B9ZVM9 353 aa10.81□□□□□ -0.68
HERC4-214ENST00000513996 USP2O75604 605 aaPredicted RBP10.81□□□□□ -0.68
HERC4-214ENST00000513996 CACNB3P54284 484 aa10.81□□□□□ -0.68
HERC4-214ENST00000513996 G3BP1Q13283 466 aaKnown RBP eCLIP10.81□□□□□ -0.68
HERC4-214ENST00000513996 RASGRF1Q13972 1273 aa10.81□□□□□ -0.68
HERC4-214ENST00000513996 DIXDC1Q155Q3 683 aa10.81□□□□□ -0.68
HERC4-214ENST00000513996 HHIPL2Q6UWX4 724 aa10.81□□□□□ -0.68
HERC4-214ENST00000513996 TEKT1Q969V4 418 aa10.81□□□□□ -0.68
HERC4-214ENST00000513996 ZDHHC15Q96MV8 337 aa10.81□□□□□ -0.68
HERC4-214ENST00000513996 TEPSINQ96N21 525 aa10.81□□□□□ -0.68
HERC4-214ENST00000513996 NEUROD6Q96NK8 337 aa10.81□□□□□ -0.68
HERC4-214ENST00000513996 RCAN3Q9UKA8 241 aa10.81□□□□□ -0.68
HERC4-214ENST00000513996 DENND2AQ9ULE3 1009 aa10.81□□□□□ -0.68
HERC4-214ENST00000513996 ANGEL1Q9UNK9 670 aaKnown RBP10.81□□□□□ -0.68
HERC4-214ENST00000513996 AKAP2Q9Y2D5 859 aa10.81□□□□□ -0.68
HERC4-214ENST00000513996 SSC5DA1L4H1 1573 aa10.81□□□□□ -0.68
HERC4-214ENST00000513996 PAPPA2Q9BXP8 1791 aa10.8□□□□□ -0.68
HERC4-214ENST00000513996 NF2P35240 595 aa10.8□□□□□ -0.68
HERC4-214ENST00000513996 MAP3K11Q16584 847 aa10.8□□□□□ -0.68
HERC4-214ENST00000513996 ARMC9Q7Z3E5 817 aa10.8□□□□□ -0.68
HERC4-214ENST00000513996 TNS4Q8IZW8 715 aa10.8□□□□□ -0.68
HERC4-214ENST00000513996 CLMNQ96JQ2 1002 aa10.8□□□□□ -0.68
HERC4-214ENST00000513996 BEGAINQ9BUH8 593 aa10.8□□□□□ -0.68
HERC4-214ENST00000513996 TMEM39BQ9GZU3 492 aa10.8□□□□□ -0.68
HERC4-214ENST00000513996 GNL3LQ9NVN8 582 aaKnown RBP10.8□□□□□ -0.68
HERC4-214ENST00000513996 NOP58Q9Y2X3 529 aaKnown RBP10.8□□□□□ -0.68
HERC4-214ENST00000513996 PPP2R3BQ9Y5P8 575 aa10.8□□□□□ -0.68
HERC4-214ENST00000513996 SALL1Q9NSC2 1324 aa10.8□□□□□ -0.68
HERC4-214ENST00000513996 SEMA3EO15041 775 aa10.79□□□□□ -0.68
HERC4-214ENST00000513996 SURF6O75683 361 aaKnown RBP10.79□□□□□ -0.68
HERC4-214ENST00000513996 MKRN3Q13064 507 aaKnown RBP10.79□□□□□ -0.68
HERC4-214ENST00000513996 SUPT20HL1Q3ZLR7 823 aa10.79□□□□□ -0.68
HERC4-214ENST00000513996 C20orf194Q5TEA3 1177 aa10.79□□□□□ -0.68
HERC4-214ENST00000513996 CEP85Q6P2H3 762 aa10.79□□□□□ -0.68
HERC4-214ENST00000513996 PI16Q6UXB8 463 aa10.79□□□□□ -0.68
HERC4-214ENST00000513996 RNF186Q9NXI6 227 aa10.79□□□□□ -0.68
HERC4-214ENST00000513996 COG6Q9Y2V7 657 aa10.79□□□□□ -0.68
HERC4-214ENST00000513996 DAGLAQ9Y4D2 1042 aa10.79□□□□□ -0.68
HERC4-214ENST00000513996 PPP1R12BO60237 982 aaPredicted RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 486.3 ms