RNA–Protein interactions for RNA: ENST00000513957.1

NEDD4-210, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-210ENST00000513957 CNTROBQ8N137 903 aa10.09□□□□□ -0.79
NEDD4-210ENST00000513957 TRPM4Q8TD43 1214 aa10.09□□□□□ -0.79
NEDD4-210ENST00000513957 FBXW7Q969H0 707 aa10.09□□□□□ -0.79
NEDD4-210ENST00000513957 FAM212AQ96EL1 285 aa10.09□□□□□ -0.79
NEDD4-210ENST00000513957 DENND2AQ9ULE3 1009 aa10.09□□□□□ -0.79
NEDD4-210ENST00000513957 MYH2Q9UKX2 1941 aa10.09□□□□□ -0.79
NEDD4-210ENST00000513957 RAB11FIP3O75154 756 aa10.08□□□□□ -0.8
NEDD4-210ENST00000513957 ITGBL1O95965 494 aaPredicted RBP10.08□□□□□ -0.8
NEDD4-210ENST00000513957 TFCP2Q12800 502 aa10.08□□□□□ -0.8
NEDD4-210ENST00000513957 C20orf194Q5TEA3 1177 aa10.08□□□□□ -0.8
NEDD4-210ENST00000513957 CDC37L1Q7L3B6 337 aa10.08□□□□□ -0.8
NEDD4-210ENST00000513957 MRIQ9BWK5 157 aa10.08□□□□□ -0.8
NEDD4-210ENST00000513957 CREBZFQ9NS37 354 aa10.08□□□□□ -0.8
NEDD4-210ENST00000513957 SERPINA10Q9UK55 444 aa10.08□□□□□ -0.8
NEDD4-210ENST00000513957 DOCK2Q92608 1830 aa10.07□□□□□ -0.8
NEDD4-210ENST00000513957 MYO1BO43795 1136 aa10.07□□□□□ -0.8
NEDD4-210ENST00000513957 ZMYND10O75800 440 aa10.07□□□□□ -0.8
NEDD4-210ENST00000513957 BCAMP50895 628 aa10.07□□□□□ -0.8
NEDD4-210ENST00000513957 HIRAP54198 1017 aaPredicted RBP10.07□□□□□ -0.8
NEDD4-210ENST00000513957 TBC1D10BQ4KMP7 808 aaPredicted RBP10.07□□□□□ -0.8
NEDD4-210ENST00000513957 CCDC102BQ68D86 513 aa10.07□□□□□ -0.8
NEDD4-210ENST00000513957 SAMD7Q7Z3H4 446 aa10.07□□□□□ -0.8
NEDD4-210ENST00000513957 KIAA0825Q8IV33 1275 aa10.07□□□□□ -0.8
NEDD4-210ENST00000513957 CERS5Q8N5B7 392 aa10.07□□□□□ -0.8
NEDD4-210ENST00000513957 DCPSQ96C86 337 aaKnown RBP10.07□□□□□ -0.8
NEDD4-210ENST00000513957 KIF1BPQ96EK5 621 aa10.07□□□□□ -0.8
NEDD4-210ENST00000513957 XAGE2Q96GT9 111 aa10.07□□□□□ -0.8
NEDD4-210ENST00000513957 ZNF512BQ96KM6 892 aaPredicted RBP10.07□□□□□ -0.8
NEDD4-210ENST00000513957 PAPPA2Q9BXP8 1791 aa10.06□□□□□ -0.8
NEDD4-210ENST00000513957 TESPA1A2RU30 521 aaPredicted RBP10.06□□□□□ -0.8
NEDD4-210ENST00000513957 WNT10BO00744 389 aa10.06□□□□□ -0.8
NEDD4-210ENST00000513957 UQCRFS1P1P0C7P4 283 aa10.06□□□□□ -0.8
NEDD4-210ENST00000513957 ARID4AP29374 1257 aaPredicted RBP10.06□□□□□ -0.8
NEDD4-210ENST00000513957 EVX2Q03828 476 aa10.06□□□□□ -0.8
NEDD4-210ENST00000513957 TNNI3KQ59H18 835 aa10.06□□□□□ -0.8
NEDD4-210ENST00000513957 GORABQ5T7V8 394 aa10.06□□□□□ -0.8
NEDD4-210ENST00000513957 MAP1SQ66K74 1059 aaPredicted RBP10.06□□□□□ -0.8
NEDD4-210ENST00000513957 LHX8Q68G74 356 aa10.06□□□□□ -0.8
NEDD4-210ENST00000513957 SMYD5Q6GMV2 418 aa10.06□□□□□ -0.8
NEDD4-210ENST00000513957 APOBEC3FQ8IUX4 373 aaKnown RBP10.06□□□□□ -0.8
NEDD4-210ENST00000513957 SULF1Q8IWU6 871 aa10.06□□□□□ -0.8
NEDD4-210ENST00000513957 ZBED3Q96IU2 234 aaPredicted RBP10.06□□□□□ -0.8
NEDD4-210ENST00000513957 GGA3Q9NZ52 723 aa10.06□□□□□ -0.8
NEDD4-210ENST00000513957 PPP2R3BQ9Y5P8 575 aa10.06□□□□□ -0.8
NEDD4-210ENST00000513957 FPGT-TNNI3KV9GXZ4 949 aa10.06□□□□□ -0.8
NEDD4-210ENST00000513957 THSD7BQ9C0I4 1608 aa10.06□□□□□ -0.8
NEDD4-210ENST00000513957 SHTN1A0MZ66 631 aa10.05□□□□□ -0.8
NEDD4-210ENST00000513957 TMEM88BA6NKF7 163 aa10.05□□□□□ -0.8
NEDD4-210ENST00000513957 PHKA1P46020 1223 aa10.05□□□□□ -0.8
NEDD4-210ENST00000513957 TIMM10P62072 90 aa10.05□□□□□ -0.8
NEDD4-210ENST00000513957 TNFAIP1Q13829 316 aa10.05□□□□□ -0.8
NEDD4-210ENST00000513957 SCARF1Q14162 830 aa10.05□□□□□ -0.8
NEDD4-210ENST00000513957 DLGAP5Q15398 846 aa10.05□□□□□ -0.8
NEDD4-210ENST00000513957 CCDC158Q5M9N0 1113 aa10.05□□□□□ -0.8
NEDD4-210ENST00000513957 TMED8Q6PL24 325 aaPredicted RBP10.05□□□□□ -0.8
NEDD4-210ENST00000513957 KRT26Q7Z3Y9 468 aa10.05□□□□□ -0.8
NEDD4-210ENST00000513957 CLASRPQ8N2M8 674 aaKnown RBP10.05□□□□□ -0.8
NEDD4-210ENST00000513957 TTF2Q9UNY4 1162 aaKnown RBP10.05□□□□□ -0.8
NEDD4-210ENST00000513957 MYH7P12883 1935 aa10.05□□□□□ -0.8
NEDD4-210ENST00000513957 LAMB1P07942 1786 aa10.04□□□□□ -0.8
NEDD4-210ENST00000513957 EGFRP00533 1210 aa10.04□□□□□ -0.8
NEDD4-210ENST00000513957 ADORA1P30542 326 aa10.04□□□□□ -0.8
NEDD4-210ENST00000513957 CHAF1AQ13111 956 aaPredicted RBP10.04□□□□□ -0.8
NEDD4-210ENST00000513957 RASGRF1Q13972 1273 aa10.04□□□□□ -0.8
NEDD4-210ENST00000513957 RBM26Q5T8P6 1007 aaKnown RBP10.04□□□□□ -0.8
NEDD4-210ENST00000513957 ANGEL2Q5VTE6 544 aaKnown RBP10.04□□□□□ -0.8
NEDD4-210ENST00000513957 SPTY2D1Q68D10 685 aaPredicted RBP10.04□□□□□ -0.8
NEDD4-210ENST00000513957 HHIPL2Q6UWX4 724 aa10.04□□□□□ -0.8
NEDD4-210ENST00000513957 SLF2Q8IX21 1173 aa10.04□□□□□ -0.8
NEDD4-210ENST00000513957 SIRT2Q8IXJ6 389 aa10.04□□□□□ -0.8
NEDD4-210ENST00000513957 RHPN1Q8TCX5 695 aa10.04□□□□□ -0.8
NEDD4-210ENST00000513957 TEKT1Q969V4 418 aa10.04□□□□□ -0.8
NEDD4-210ENST00000513957 HHIPL1Q96JK4 782 aa10.04□□□□□ -0.8
NEDD4-210ENST00000513957 NEUROD6Q96NK8 337 aa10.04□□□□□ -0.8
NEDD4-210ENST00000513957 MXD3Q9BW11 206 aa10.04□□□□□ -0.8
NEDD4-210ENST00000513957 EXOC6BQ9Y2D4 811 aa10.04□□□□□ -0.8
NEDD4-210ENST00000513957 FOCADQ5VW36 1801 aa10.04□□□□□ -0.8
NEDD4-210ENST00000513957 MYO5AQ9Y4I1 1855 aaKnown RBP10.04□□□□□ -0.8
NEDD4-210ENST00000513957 LDHBP07195 334 aaKnown RBP10.03□□□□□ -0.8
NEDD4-210ENST00000513957 CRKP46108 304 aa10.03□□□□□ -0.8
NEDD4-210ENST00000513957 FKBP1BP68106 108 aa10.03□□□□□ -0.8
NEDD4-210ENST00000513957 CFAP100Q494V2 611 aa10.03□□□□□ -0.8
NEDD4-210ENST00000513957 TTC39AQ5SRH9 613 aa10.03□□□□□ -0.8
NEDD4-210ENST00000513957 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.03□□□□□ -0.8
NEDD4-210ENST00000513957 ZDHHC15Q96MV8 337 aa10.03□□□□□ -0.8
NEDD4-210ENST00000513957 IQSEC3Q9UPP2 1182 aaPredicted RBP10.03□□□□□ -0.8
NEDD4-210ENST00000513957 RPAP1Q9BWH6 1393 aaPredicted RBP10.02□□□□□ -0.8
NEDD4-210ENST00000513957 RASSF10A6NK89 507 aa10.02□□□□□ -0.81
NEDD4-210ENST00000513957 F8W031 263 aaPredicted RBP10.02□□□□□ -0.81
NEDD4-210ENST00000513957 MAP4K4O95819 1239 aaPredicted RBP10.02□□□□□ -0.81
NEDD4-210ENST00000513957 NF2P35240 595 aa10.02□□□□□ -0.81
NEDD4-210ENST00000513957 RBM5P52756 815 aaKnown RBP eCLIP10.02□□□□□ -0.81
NEDD4-210ENST00000513957 NBPF9Q3BBW0 867 aa10.02□□□□□ -0.81
NEDD4-210ENST00000513957 FKBP1CQ5VVH2 108 aa10.02□□□□□ -0.81
NEDD4-210ENST00000513957 SPATA5Q8NB90 893 aa10.02□□□□□ -0.81
NEDD4-210ENST00000513957 GLIS2Q9BZE0 524 aaPredicted RBP10.02□□□□□ -0.81
NEDD4-210ENST00000513957 LRRCC1Q9C099 1032 aa10.02□□□□□ -0.81
NEDD4-210ENST00000513957 DCTPP1Q9H773 170 aa10.02□□□□□ -0.81
NEDD4-210ENST00000513957 DBNLQ9UJU6 430 aaKnown RBP10.02□□□□□ -0.81
NEDD4-210ENST00000513957 JAG2Q9Y219 1238 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms