RNA–Protein interactions for RNA: ENST00000513525.1

CCL28-203, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best) BASIC

Gene CCL28, Length 1,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-203ENST00000513525 NBPF7P0C2Y1 421 aaPredicted RBP12.37□□□□□ -0.43
CCL28-203ENST00000513525 NOGQ13253 232 aa12.37□□□□□ -0.43
CCL28-203ENST00000513525 RABL6Q3YEC7 729 aaPredicted RBP12.37□□□□□ -0.43
CCL28-203ENST00000513525 SSH1Q8WYL5 1049 aa12.37□□□□□ -0.43
CCL28-203ENST00000513525 CDCA5Q96FF9 252 aa12.37□□□□□ -0.43
CCL28-203ENST00000513525 CDCA7LQ96GN5 454 aa12.37□□□□□ -0.43
CCL28-203ENST00000513525 ZNF594Q96JF6 807 aaPredicted RBP12.37□□□□□ -0.43
CCL28-203ENST00000513525 BEGAINQ9BUH8 593 aa12.37□□□□□ -0.43
CCL28-203ENST00000513525 MXD3Q9BW11 206 aa12.37□□□□□ -0.43
CCL28-203ENST00000513525 SNAP23O00161 211 aa12.37□□□□□ -0.43
CCL28-203ENST00000513525 WNT10BO00744 389 aa12.37□□□□□ -0.43
CCL28-203ENST00000513525 CA12O43570 354 aa12.37□□□□□ -0.43
CCL28-203ENST00000513525 CT47B1P0C2W7 299 aaPredicted RBP12.37□□□□□ -0.43
CCL28-203ENST00000513525 IL1R1P14778 569 aa12.37□□□□□ -0.43
CCL28-203ENST00000513525 RRP1P56182 461 aaKnown RBP12.37□□□□□ -0.43
CCL28-203ENST00000513525 GTF2IP78347 998 aa12.37□□□□□ -0.43
CCL28-203ENST00000513525 NBPF9Q3BBW0 867 aa12.37□□□□□ -0.43
CCL28-203ENST00000513525 TAF7LQ5H9L4 462 aa12.37□□□□□ -0.43
CCL28-203ENST00000513525 RGMBQ6NW40 437 aa12.37□□□□□ -0.43
CCL28-203ENST00000513525 ZNF804AQ7Z570 1209 aa12.37□□□□□ -0.43
CCL28-203ENST00000513525 HELBQ8NG08 1087 aaPredicted RBP12.37□□□□□ -0.43
CCL28-203ENST00000513525 FBXW7Q969H0 707 aa12.37□□□□□ -0.43
CCL28-203ENST00000513525 CNNM1Q9NRU3 951 aa12.37□□□□□ -0.43
CCL28-203ENST00000513525 COL1A1P02452 1464 aaPredicted RBP12.36□□□□□ -0.43
CCL28-203ENST00000513525 FAM155AB1AL88 458 aaPredicted RBP12.36□□□□□ -0.43
CCL28-203ENST00000513525 FKBP1AP62942 108 aaKnown RBP12.36□□□□□ -0.43
CCL28-203ENST00000513525 FKBP1BP68106 108 aa12.36□□□□□ -0.43
CCL28-203ENST00000513525 ZBED3Q96IU2 234 aaPredicted RBP12.36□□□□□ -0.43
CCL28-203ENST00000513525 BICC1Q9H694 974 aaKnown RBP12.36□□□□□ -0.43
CCL28-203ENST00000513525 HDAC9Q9UKV0 1011 aa12.36□□□□□ -0.43
CCL28-203ENST00000513525 UBE4AQ14139 1066 aa12.35□□□□□ -0.43
CCL28-203ENST00000513525 KIAA0825Q8IV33 1275 aa12.35□□□□□ -0.43
CCL28-203ENST00000513525 CCDC102AQ96A19 550 aa12.35□□□□□ -0.43
CCL28-203ENST00000513525 OTOFQ9HC10 1997 aa12.34□□□□□ -0.43
CCL28-203ENST00000513525 ANKRD44Q8N8A2 993 aa12.34□□□□□ -0.43
CCL28-203ENST00000513525 MTMR14Q8NCE2 650 aa12.34□□□□□ -0.43
CCL28-203ENST00000513525 CIZ1Q9ULV3 898 aaPredicted RBP12.34□□□□□ -0.43
CCL28-203ENST00000513525 RIPOR2Q9Y4F9 1068 aa12.34□□□□□ -0.43
CCL28-203ENST00000513525 MROH5Q6ZUA9 1318 aa12.33□□□□□ -0.44
CCL28-203ENST00000513525 SLC10A3P09131 477 aa12.33□□□□□ -0.44
CCL28-203ENST00000513525 ZNF157P51786 506 aaPredicted RBP12.33□□□□□ -0.44
CCL28-203ENST00000513525 VARS2Q5ST30 1063 aaKnown RBP12.33□□□□□ -0.44
CCL28-203ENST00000513525 APOBEC3FQ8IUX4 373 aaKnown RBP12.33□□□□□ -0.44
CCL28-203ENST00000513525 CERS5Q8N5B7 392 aa12.33□□□□□ -0.44
CCL28-203ENST00000513525 ZIC5Q96T25 663 aa12.33□□□□□ -0.44
CCL28-203ENST00000513525 PUS3Q9BZE2 481 aaKnown RBP12.33□□□□□ -0.44
CCL28-203ENST00000513525 USP44Q9H0E7 712 aa12.33□□□□□ -0.44
CCL28-203ENST00000513525 ZSWIM6Q9HCJ5 1215 aa12.33□□□□□ -0.44
CCL28-203ENST00000513525 SMC4Q9NTJ3 1288 aa12.33□□□□□ -0.44
CCL28-203ENST00000513525 FAM205AQ6ZU69 1335 aa12.33□□□□□ -0.44
CCL28-203ENST00000513525 PLIN1O60240 522 aa12.32□□□□□ -0.44
CCL28-203ENST00000513525 SASH1O94885 1247 aa12.32□□□□□ -0.44
CCL28-203ENST00000513525 SPOCK2Q92563 424 aa12.32□□□□□ -0.44
CCL28-203ENST00000513525 RASAL3Q86YV0 1011 aa12.32□□□□□ -0.44
CCL28-203ENST00000513525 TDRD7Q8NHU6 1098 aaKnown RBP12.32□□□□□ -0.44
CCL28-203ENST00000513525 HIBADHP31937 336 aaKnown RBP12.31□□□□□ -0.44
CCL28-203ENST00000513525 DLGAP5Q15398 846 aa12.31□□□□□ -0.44
CCL28-203ENST00000513525 VGLL2Q8N8G2 317 aa12.31□□□□□ -0.44
CCL28-203ENST00000513525 FAM84BQ96KN1 310 aaPredicted RBP12.31□□□□□ -0.44
CCL28-203ENST00000513525 SAGE1Q9NXZ1 904 aa12.31□□□□□ -0.44
CCL28-203ENST00000513525 TSKSQ9UJT2 592 aa12.31□□□□□ -0.44
CCL28-203ENST00000513525 SCAF8Q9UPN6 1271 aaKnown RBP12.31□□□□□ -0.44
CCL28-203ENST00000513525 NF2P35240 595 aa12.3□□□□□ -0.44
CCL28-203ENST00000513525 KIF23Q02241 960 aaPredicted RBP12.3□□□□□ -0.44
CCL28-203ENST00000513525 LRRC24Q50LG9 513 aa12.3□□□□□ -0.44
CCL28-203ENST00000513525 KIF16BQ96L93 1317 aa12.29□□□□□ -0.44
CCL28-203ENST00000513525 PDE8BO95263 885 aa12.29□□□□□ -0.44
CCL28-203ENST00000513525 GYG1P46976 350 aa12.29□□□□□ -0.44
CCL28-203ENST00000513525 PRAMEF18Q5VWM3 479 aa12.29□□□□□ -0.44
CCL28-203ENST00000513525 FBXO33Q7Z6M2 555 aa12.29□□□□□ -0.44
CCL28-203ENST00000513525 PPP2R3BQ9Y5P8 575 aa12.29□□□□□ -0.44
CCL28-203ENST00000513525 SSC5DA1L4H1 1573 aa12.28□□□□□ -0.44
CCL28-203ENST00000513525 AK9Q5TCS8 1911 aa12.28□□□□□ -0.44
CCL28-203ENST00000513525 MYH2Q9UKX2 1941 aa12.28□□□□□ -0.44
CCL28-203ENST00000513525 MYO1BO43795 1136 aa12.28□□□□□ -0.44
CCL28-203ENST00000513525 RFX5P48382 616 aaPredicted RBP12.28□□□□□ -0.44
CCL28-203ENST00000513525 CFAP100Q494V2 611 aa12.28□□□□□ -0.44
CCL28-203ENST00000513525 METTL24Q5JXM2 366 aa12.28□□□□□ -0.44
CCL28-203ENST00000513525 MFSD14BQ5SR56 506 aa12.28□□□□□ -0.44
CCL28-203ENST00000513525 MOB2Q70IA6 237 aa12.28□□□□□ -0.44
CCL28-203ENST00000513525 CSRNP1Q96S65 589 aa12.28□□□□□ -0.44
CCL28-203ENST00000513525 API5Q9BZZ5 524 aaKnown RBP12.28□□□□□ -0.44
CCL28-203ENST00000513525 NOB1Q9ULX3 412 aaKnown RBP12.28□□□□□ -0.44
CCL28-203ENST00000513525 F8W031 263 aaPredicted RBP12.27□□□□□ -0.44
CCL28-203ENST00000513525 UBE2Q2LH0YL09 131 aa12.27□□□□□ -0.44
CCL28-203ENST00000513525 RARSP54136 660 aaKnown RBP12.27□□□□□ -0.44
CCL28-203ENST00000513525 PTPN12Q05209 780 aaKnown RBP12.27□□□□□ -0.44
CCL28-203ENST00000513525 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.27□□□□□ -0.44
CCL28-203ENST00000513525 KLHDC4Q8TBB5 520 aa12.27□□□□□ -0.44
CCL28-203ENST00000513525 PRMT6Q96LA8 375 aaPredicted RBP12.27□□□□□ -0.44
CCL28-203ENST00000513525 DEFB129Q9H1M3 183 aa12.27□□□□□ -0.44
CCL28-203ENST00000513525 SERPINA10Q9UK55 444 aa12.27□□□□□ -0.44
CCL28-203ENST00000513525 JAG2Q9Y219 1238 aa12.27□□□□□ -0.44
CCL28-203ENST00000513525 PCDHAC2Q9Y5I4 1007 aa12.27□□□□□ -0.44
CCL28-203ENST00000513525 EYA2O00167 538 aa12.27□□□□□ -0.45
CCL28-203ENST00000513525 UBTFL1P0CB47 393 aaPredicted RBP12.27□□□□□ -0.45
CCL28-203ENST00000513525 FGFR2P21802 821 aa12.27□□□□□ -0.45
CCL28-203ENST00000513525 TTLL12Q14166 644 aaPredicted RBP12.27□□□□□ -0.45
CCL28-203ENST00000513525 MAP3K11Q16584 847 aa12.27□□□□□ -0.45
CCL28-203ENST00000513525 CAVIN4Q5BKX8 364 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms