RNA–Protein interactions for RNA: ENST00000513064.1

CHD1-210, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 2

Gene CHD1, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-210ENST00000513064 AKAP2Q9Y2D5 859 aa8.01□□□□□ -1.13
CHD1-210ENST00000513064 ALX3O95076 343 aa8□□□□□ -1.13
CHD1-210ENST00000513064 EIF4BP23588 611 aaKnown RBP8□□□□□ -1.13
CHD1-210ENST00000513064 ACAD11Q709F0 780 aa8□□□□□ -1.13
CHD1-210ENST00000513064 TMC4Q7Z404 712 aa8□□□□□ -1.13
CHD1-210ENST00000513064 TRIM56Q9BRZ2 755 aaKnown RBP8□□□□□ -1.13
CHD1-210ENST00000513064 SSBP4Q9BWG4 385 aaPredicted RBP8□□□□□ -1.13
CHD1-210ENST00000513064 BCL2L13Q9BXK5 485 aa8□□□□□ -1.13
CHD1-210ENST00000513064 TMEM39AQ9NV64 488 aa8□□□□□ -1.13
CHD1-210ENST00000513064 LOC100289279A0A1B0GTE1 492 aa7.99□□□□□ -1.13
CHD1-210ENST00000513064 MEGF11A6BM72 1044 aa7.99□□□□□ -1.13
CHD1-210ENST00000513064 CYP11A1P05108 521 aa7.99□□□□□ -1.13
CHD1-210ENST00000513064 DZIP1LQ8IYY4 767 aaKnown RBP7.99□□□□□ -1.13
CHD1-210ENST00000513064 DLGAP3O95886 979 aa7.98□□□□□ -1.13
CHD1-210ENST00000513064 USP17L7P0C7H9 530 aa7.98□□□□□ -1.13
CHD1-210ENST00000513064 XPCQ01831 940 aaPredicted RBP7.98□□□□□ -1.13
CHD1-210ENST00000513064 PPP2R3AQ06190 1150 aa7.98□□□□□ -1.13
CHD1-210ENST00000513064 PSMD2Q13200 908 aa7.98□□□□□ -1.13
CHD1-210ENST00000513064 AGGF1Q8N302 714 aaeCLIP7.98□□□□□ -1.13
CHD1-210ENST00000513064 USP26Q9BXU7 913 aa7.98□□□□□ -1.13
CHD1-210ENST00000513064 CEP44Q9C0F1 390 aa7.98□□□□□ -1.13
CHD1-210ENST00000513064 MAOBP27338 520 aa7.97□□□□□ -1.13
CHD1-210ENST00000513064 ZNF157P51786 506 aaPredicted RBP7.97□□□□□ -1.13
CHD1-210ENST00000513064 AP3B2Q13367 1082 aa7.97□□□□□ -1.13
CHD1-210ENST00000513064 POU4F3Q15319 338 aa7.97□□□□□ -1.13
CHD1-210ENST00000513064 MEGF10Q96KG7 1140 aa7.97□□□□□ -1.13
CHD1-210ENST00000513064 NECAB3Q96P71 396 aaPredicted RBP7.97□□□□□ -1.13
CHD1-210ENST00000513064 TMPRSS13Q9BYE2 586 aa7.97□□□□□ -1.13
CHD1-210ENST00000513064 RNF208Q9H0X6 261 aa7.97□□□□□ -1.13
CHD1-210ENST00000513064 ZNF326Q5BKZ1 582 aaKnown RBP7.96□□□□□ -1.14
CHD1-210ENST00000513064 EXOSC6Q5RKV6 272 aaKnown RBP7.96□□□□□ -1.14
CHD1-210ENST00000513064 GIPC2Q8TF65 315 aa7.96□□□□□ -1.14
CHD1-210ENST00000513064 FAM161BQ96MY7 647 aa7.96□□□□□ -1.14
CHD1-210ENST00000513064 RUSC1Q9BVN2 902 aa7.96□□□□□ -1.14
CHD1-210ENST00000513064 SUGCTQ9HAC7 445 aa7.96□□□□□ -1.14
CHD1-210ENST00000513064 TPSG1Q9NRR2 321 aa7.96□□□□□ -1.14
CHD1-210ENST00000513064 GPN3Q9UHW5 284 aaPredicted RBP7.96□□□□□ -1.14
CHD1-210ENST00000513064 UBL7Q96S82 380 aaPredicted RBP7.95□□□□□ -1.14
CHD1-210ENST00000513064 CORO1BQ9BR76 489 aa7.95□□□□□ -1.14
CHD1-210ENST00000513064 CEP41Q9BYV8 373 aa7.95□□□□□ -1.14
CHD1-210ENST00000513064 ENC1O14682 589 aa7.94□□□□□ -1.14
CHD1-210ENST00000513064 SORBS3O60504 671 aa7.94□□□□□ -1.14
CHD1-210ENST00000513064 ECEL1O95672 775 aa7.94□□□□□ -1.14
CHD1-210ENST00000513064 CTSBP07858 339 aa7.94□□□□□ -1.14
CHD1-210ENST00000513064 GLB1P16278 677 aa7.94□□□□□ -1.14
CHD1-210ENST00000513064 ZNF16P17020 682 aaPredicted RBP7.94□□□□□ -1.14
CHD1-210ENST00000513064 DOC2BQ14184 412 aa7.94□□□□□ -1.14
CHD1-210ENST00000513064 HP1BP3Q5SSJ5 553 aaPredicted RBP7.94□□□□□ -1.14
CHD1-210ENST00000513064 NUTM2GQ5VZR2 741 aa7.94□□□□□ -1.14
CHD1-210ENST00000513064 ANKRD34AQ69YU3 496 aa7.94□□□□□ -1.14
CHD1-210ENST00000513064 TPTE2Q6XPS3 522 aa7.94□□□□□ -1.14
CHD1-210ENST00000513064 SMG8Q8ND04 991 aaKnown RBP7.94□□□□□ -1.14
CHD1-210ENST00000513064 FBXO24O75426 580 aa7.93□□□□□ -1.14
CHD1-210ENST00000513064 CTSHP09668 335 aa7.93□□□□□ -1.14
CHD1-210ENST00000513064 NME2P22392 152 aa7.93□□□□□ -1.14
CHD1-210ENST00000513064 PDZD3Q86UT5 571 aa7.93□□□□□ -1.14
CHD1-210ENST00000513064 RBM47A0AV96 593 aaKnown RBP7.92□□□□□ -1.14
CHD1-210ENST00000513064 GSTP1P09211 210 aaKnown RBP7.92□□□□□ -1.14
CHD1-210ENST00000513064 ARNTP27540 789 aa7.92□□□□□ -1.14
CHD1-210ENST00000513064 ITGAEP38570 1179 aa7.92□□□□□ -1.14
CHD1-210ENST00000513064 NKAPLQ5M9Q1 402 aa7.92□□□□□ -1.14
CHD1-210ENST00000513064 SV2BQ7L1I2 683 aa7.92□□□□□ -1.14
CHD1-210ENST00000513064 SULF2Q8IWU5 870 aa7.92□□□□□ -1.14
CHD1-210ENST00000513064 STK35Q8TDR2 534 aa7.92□□□□□ -1.14
CHD1-210ENST00000513064 FAM46AQ96IP4 442 aaKnown RBP7.92□□□□□ -1.14
CHD1-210ENST00000513064 CYP4F12Q9HCS2 524 aa7.92□□□□□ -1.14
CHD1-210ENST00000513064 MRS2Q9HD23 443 aa7.92□□□□□ -1.14
CHD1-210ENST00000513064 TTF2Q9UNY4 1162 aaKnown RBP7.92□□□□□ -1.14
CHD1-210ENST00000513064 SYNGAP1Q96PV0 1343 aa7.92□□□□□ -1.14
CHD1-210ENST00000513064 PAGE1O75459 146 aa7.91□□□□□ -1.14
CHD1-210ENST00000513064 TIAF1O95411 115 aa7.91□□□□□ -1.14
CHD1-210ENST00000513064 UVSSAQ2YD98 709 aa7.91□□□□□ -1.14
CHD1-210ENST00000513064 FDX2Q6P4F2 183 aa7.91□□□□□ -1.14
CHD1-210ENST00000513064 RGS22Q8NE09 1264 aa7.91□□□□□ -1.14
CHD1-210ENST00000513064 TP53INP1Q96A56 240 aa7.91□□□□□ -1.14
CHD1-210ENST00000513064 CRELD1Q96HD1 420 aa7.91□□□□□ -1.14
CHD1-210ENST00000513064 KRT82Q9NSB4 513 aa7.91□□□□□ -1.14
CHD1-210ENST00000513064 USP31Q70CQ4 1352 aa7.91□□□□□ -1.14
CHD1-210ENST00000513064 H2AFB1P0C5Y9 115 aa7.9□□□□□ -1.14
CHD1-210ENST00000513064 H2AFB2P0C5Z0 115 aa7.9□□□□□ -1.14
CHD1-210ENST00000513064 BMP6P22004 513 aa7.9□□□□□ -1.14
CHD1-210ENST00000513064 PREPP48147 710 aa7.9□□□□□ -1.14
CHD1-210ENST00000513064 ST13P50502 369 aaKnown RBP7.9□□□□□ -1.14
CHD1-210ENST00000513064 ZNF252P-AS1Q0IIN9 211 aa7.9□□□□□ -1.14
CHD1-210ENST00000513064 MRPL58Q14197 206 aaKnown RBP7.9□□□□□ -1.14
CHD1-210ENST00000513064 TAF1CQ15572 869 aaPredicted RBP7.9□□□□□ -1.14
CHD1-210ENST00000513064 RSPO4Q2I0M5 234 aaPredicted RBP7.9□□□□□ -1.14
CHD1-210ENST00000513064 MEI1Q5TIA1 1274 aa7.9□□□□□ -1.14
CHD1-210ENST00000513064 C12orf50Q8NA57 414 aaPredicted RBP7.9□□□□□ -1.14
CHD1-210ENST00000513064 EMILIN2Q9BXX0 1053 aa7.9□□□□□ -1.14
CHD1-210ENST00000513064 CCDC86Q9H6F5 360 aaKnown RBP7.9□□□□□ -1.14
CHD1-210ENST00000513064 CCDC9Q9Y3X0 531 aaKnown RBP7.9□□□□□ -1.14
CHD1-210ENST00000513064 SAMM50Q9Y512 469 aa7.9□□□□□ -1.14
CHD1-210ENST00000513064 CELA3AP09093 270 aa7.89□□□□□ -1.15
CHD1-210ENST00000513064 ARMC10Q8N2F6 343 aa7.89□□□□□ -1.15
CHD1-210ENST00000513064 CACNA2D2Q9NY47 1150 aa7.89□□□□□ -1.15
CHD1-210ENST00000513064 VTI1BQ9UEU0 232 aa7.89□□□□□ -1.15
CHD1-210ENST00000513064 SART1O43290 800 aaKnown RBP7.88□□□□□ -1.15
CHD1-210ENST00000513064 AOC2O75106 756 aa7.88□□□□□ -1.15
CHD1-210ENST00000513064 FURINP09958 794 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms