RNA–Protein interactions for RNA: ENST00000512617.6

PVT1-202, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 383 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-202ENST00000512617 TMEM229AB2RXF0 380 aa4.05□□□□□ -1.76
PVT1-202ENST00000512617 CBFA2T2O43439 604 aa4.05□□□□□ -1.76
PVT1-202ENST00000512617 PIP5K1CO60331 668 aa4.05□□□□□ -1.76
PVT1-202ENST00000512617 NBNO60934 754 aa4.05□□□□□ -1.76
PVT1-202ENST00000512617 RFPL1O75677 317 aa4.05□□□□□ -1.76
PVT1-202ENST00000512617 GJB6O95452 261 aa4.05□□□□□ -1.76
PVT1-202ENST00000512617 POTEIP0CG38 1075 aa4.05□□□□□ -1.76
PVT1-202ENST00000512617 U2AF1L5P0DN76 240 aaPredicted RBP4.05□□□□□ -1.76
PVT1-202ENST00000512617 DDIT3P35638 169 aa4.05□□□□□ -1.76
PVT1-202ENST00000512617 BCAMP50895 628 aa4.05□□□□□ -1.76
PVT1-202ENST00000512617 U2AF1Q01081 240 aaKnown RBP eCLIP4.05□□□□□ -1.769e-9■■■■■ 30
PVT1-202ENST00000512617 CHAF1AQ13111 956 aaPredicted RBP4.05□□□□□ -1.76
PVT1-202ENST00000512617 TCIRG1Q13488 830 aa4.05□□□□□ -1.76
PVT1-202ENST00000512617 PDE1CQ14123 709 aaPredicted RBP4.05□□□□□ -1.76
PVT1-202ENST00000512617 CCDC85BQ15834 202 aaPredicted RBP4.05□□□□□ -1.76
PVT1-202ENST00000512617 PPP2R5EQ16537 467 aa4.05□□□□□ -1.76
PVT1-202ENST00000512617 CDC37Q16543 378 aaPredicted RBP4.05□□□□□ -1.76
PVT1-202ENST00000512617 TBC1D10BQ4KMP7 808 aaPredicted RBP4.05□□□□□ -1.76
PVT1-202ENST00000512617 CCDC92Q53HC0 331 aaPredicted RBP4.05□□□□□ -1.76
PVT1-202ENST00000512617 FBXW10Q5XX13 1052 aa4.05□□□□□ -1.76
PVT1-202ENST00000512617 PDXDC1Q6P996 788 aa4.05□□□□□ -1.76
PVT1-202ENST00000512617 FBXL19Q6PCT2 694 aa4.05□□□□□ -1.76
PVT1-202ENST00000512617 NXPE4Q6UWF7 544 aa4.05□□□□□ -1.76
PVT1-202ENST00000512617 FTSJ3Q8IY81 847 aaKnown RBP4.05□□□□□ -1.76
PVT1-202ENST00000512617 IFNL2Q8IZJ0 200 aa4.05□□□□□ -1.76
PVT1-202ENST00000512617 PI4K2BQ8TCG2 481 aa4.05□□□□□ -1.76
PVT1-202ENST00000512617 JPH3Q8WXH2 748 aaPredicted RBP4.05□□□□□ -1.76
PVT1-202ENST00000512617 MYO19Q96H55 970 aa4.05□□□□□ -1.76
PVT1-202ENST00000512617 ALDH8A1Q9H2A2 487 aaPredicted RBP4.05□□□□□ -1.76
PVT1-202ENST00000512617 ESF1Q9H501 851 aaKnown RBP4.05□□□□□ -1.76
PVT1-202ENST00000512617 FBRSQ9HAH7 460 aa4.05□□□□□ -1.76
PVT1-202ENST00000512617 PLCB1Q9NQ66 1216 aa4.05□□□□□ -1.76
PVT1-202ENST00000512617 STRN4Q9NRL3 753 aa4.05□□□□□ -1.76
PVT1-202ENST00000512617 CWC25Q9NXE8 425 aaPredicted RBP4.05□□□□□ -1.76
PVT1-202ENST00000512617 SLC5A4Q9NY91 659 aa4.05□□□□□ -1.76
PVT1-202ENST00000512617 ZMYM5Q9UJ78 669 aa4.05□□□□□ -1.76
PVT1-202ENST00000512617 PPT2Q9UMR5 302 aa4.05□□□□□ -1.76
PVT1-202ENST00000512617 MORC2Q9Y6X9 1032 aaPredicted RBP4.05□□□□□ -1.76
PVT1-202ENST00000512617 PRDM2Q13029 1718 aa4.04□□□□□ -1.76
PVT1-202ENST00000512617 A0A1W2PRQ8 180 aa4.04□□□□□ -1.76
PVT1-202ENST00000512617 ANO9A1A5B4 782 aa4.04□□□□□ -1.76
PVT1-202ENST00000512617 GSG1L2A8MUP6 293 aa4.04□□□□□ -1.76
PVT1-202ENST00000512617 DDAH1O94760 285 aa4.04□□□□□ -1.76
PVT1-202ENST00000512617 RPLP1P05386 114 aaKnown RBP4.04□□□□□ -1.76
PVT1-202ENST00000512617 CCNYL3P0C7X3 344 aa4.04□□□□□ -1.76
PVT1-202ENST00000512617 RLBP1P12271 317 aa4.04□□□□□ -1.76
PVT1-202ENST00000512617 ZSCAN20P17040 1043 aaPredicted RBP4.04□□□□□ -1.76
PVT1-202ENST00000512617 SERPINB3P29508 390 aa4.04□□□□□ -1.76
PVT1-202ENST00000512617 GSTT1P30711 240 aa4.04□□□□□ -1.76
PVT1-202ENST00000512617 GDF10P55107 478 aa4.04□□□□□ -1.76
PVT1-202ENST00000512617 GPSM2P81274 684 aa4.04□□□□□ -1.76
PVT1-202ENST00000512617 STK3Q13188 491 aa4.04□□□□□ -1.76
PVT1-202ENST00000512617 ERFEQ4G0M1 354 aa4.04□□□□□ -1.76
PVT1-202ENST00000512617 COBLL1Q53SF7 1204 aa4.04□□□□□ -1.76
PVT1-202ENST00000512617 FAM133BQ5BKY9 247 aaKnown RBP4.04□□□□□ -1.76
PVT1-202ENST00000512617 SNAP47Q5SQN1 464 aa4.04□□□□□ -1.76
PVT1-202ENST00000512617 JAKMIP3Q5VZ66 844 aa4.04□□□□□ -1.76
PVT1-202ENST00000512617 LHX8Q68G74 356 aa4.04□□□□□ -1.76
PVT1-202ENST00000512617 PPP4R3AQ6IN85 833 aa4.04□□□□□ -1.76
PVT1-202ENST00000512617 CXorf57Q6NSI4 855 aaKnown RBP4.04□□□□□ -1.76
PVT1-202ENST00000512617 PRPF40BQ6NWY9 871 aaKnown RBP4.04□□□□□ -1.76
PVT1-202ENST00000512617 C1orf228Q6PIY5 440 aa4.04□□□□□ -1.76
PVT1-202ENST00000512617 POTEEQ6S8J3 1075 aa4.04□□□□□ -1.76
PVT1-202ENST00000512617 C3orf67Q6ZVT6 689 aa4.04□□□□□ -1.76
PVT1-202ENST00000512617 DDX46Q7L014 1031 aaKnown RBP4.04□□□□□ -1.76
PVT1-202ENST00000512617 SH3BP5LQ7L8J4 393 aa4.04□□□□□ -1.76
PVT1-202ENST00000512617 ETFBKMTQ8IXQ9 262 aa4.04□□□□□ -1.76
PVT1-202ENST00000512617 CLASRPQ8N2M8 674 aaKnown RBP4.04□□□□□ -1.76
PVT1-202ENST00000512617 STAG2Q8N3U4 1231 aa4.04□□□□□ -1.76
PVT1-202ENST00000512617 ST13P5Q8NFI4 369 aaPredicted RBP4.04□□□□□ -1.76
PVT1-202ENST00000512617 OR6P1Q8NGX9 317 aa4.04□□□□□ -1.76
PVT1-202ENST00000512617 WDR66Q8TBY9 1149 aa4.04□□□□□ -1.76
PVT1-202ENST00000512617 TRMT2BQ96GJ1 504 aaKnown RBP4.04□□□□□ -1.76
PVT1-202ENST00000512617 NGLY1Q96IV0 654 aa4.04□□□□□ -1.76
PVT1-202ENST00000512617 FERD3LQ96RJ6 166 aa4.04□□□□□ -1.76
PVT1-202ENST00000512617 BCO2Q9BYV7 579 aa4.04□□□□□ -1.76
PVT1-202ENST00000512617 CCDC8Q9H0W5 538 aaPredicted RBP4.04□□□□□ -1.76
PVT1-202ENST00000512617 CNNM2Q9H8M5 875 aa4.04□□□□□ -1.76
PVT1-202ENST00000512617 BCL2L12Q9HB09 334 aa4.04□□□□□ -1.76
PVT1-202ENST00000512617 LGR6Q9HBX8 967 aa4.04□□□□□ -1.76
PVT1-202ENST00000512617 EVA1BQ9NVM1 165 aa4.04□□□□□ -1.76
PVT1-202ENST00000512617 ZFATQ9P243 1243 aa4.04□□□□□ -1.76
PVT1-202ENST00000512617 SERTAD1Q9UHV2 236 aa4.04□□□□□ -1.76
PVT1-202ENST00000512617 ISY1Q9ULR0 285 aaKnown RBP4.04□□□□□ -1.76
PVT1-202ENST00000512617 IPPQ9Y573 584 aa4.04□□□□□ -1.76
PVT1-202ENST00000512617 POTEFA5A3E0 1075 aa4.03□□□□□ -1.76
PVT1-202ENST00000512617 A6NHS1 94 aa4.03□□□□□ -1.76
PVT1-202ENST00000512617 RNF40O75150 1001 aa4.03□□□□□ -1.76
PVT1-202ENST00000512617 GADD45BO75293 160 aaPredicted RBP4.03□□□□□ -1.76
PVT1-202ENST00000512617 TNFRSF21O75509 655 aa4.03□□□□□ -1.76
PVT1-202ENST00000512617 RFPL3O75679 317 aa4.03□□□□□ -1.76
PVT1-202ENST00000512617 RPN1P04843 607 aaKnown RBP4.03□□□□□ -1.76
PVT1-202ENST00000512617 NUDT7P0C024 238 aa4.03□□□□□ -1.76
PVT1-202ENST00000512617 PHKG2P15735 406 aa4.03□□□□□ -1.76
PVT1-202ENST00000512617 GIPRP48546 466 aa4.03□□□□□ -1.76
PVT1-202ENST00000512617 SCNN1DP51172 638 aa4.03□□□□□ -1.76
PVT1-202ENST00000512617 ATN1P54259 1190 aaPredicted RBP4.03□□□□□ -1.76
PVT1-202ENST00000512617 EPHA4P54764 986 aa4.03□□□□□ -1.76
PVT1-202ENST00000512617 CASP7P55210 303 aa4.03□□□□□ -1.76
PVT1-202ENST00000512617 PSMA6P60900 246 aaKnown RBP4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms