RNA–Protein interactions for RNA: ENST00000512340.5

NR1I3-231, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 891 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-231ENST00000512340 DZIP1Q86YF9 867 aaKnown RBP9.12□□□□□ -0.95
NR1I3-231ENST00000512340 MTMR14Q8NCE2 650 aa9.12□□□□□ -0.95
NR1I3-231ENST00000512340 HOOK2Q96ED9 719 aa9.12□□□□□ -0.95
NR1I3-231ENST00000512340 ZNF512BQ96KM6 892 aaPredicted RBP9.12□□□□□ -0.95
NR1I3-231ENST00000512340 LRP2BPQ9P2M1 347 aa9.12□□□□□ -0.95
NR1I3-231ENST00000512340 ABCF2Q9UG63 623 aa9.12□□□□□ -0.95
NR1I3-231ENST00000512340 CNTNAP1P78357 1384 aa9.12□□□□□ -0.95
NR1I3-231ENST00000512340 PSME4Q14997 1843 aa9.11□□□□□ -0.95
NR1I3-231ENST00000512340 ARID4AP29374 1257 aaPredicted RBP9.11□□□□□ -0.95
NR1I3-231ENST00000512340 PHKA1P46020 1223 aa9.11□□□□□ -0.95
NR1I3-231ENST00000512340 HDAC1Q13547 482 aaPredicted RBP9.11□□□□□ -0.95
NR1I3-231ENST00000512340 LRRFIP1Q32MZ4 808 aaKnown RBP9.11□□□□□ -0.95
NR1I3-231ENST00000512340 CFAP100Q494V2 611 aa9.11□□□□□ -0.95
NR1I3-231ENST00000512340 MAP1SQ66K74 1059 aaPredicted RBP9.11□□□□□ -0.95
NR1I3-231ENST00000512340 HHIPL2Q6UWX4 724 aa9.11□□□□□ -0.95
NR1I3-231ENST00000512340 SPATA5Q8NB90 893 aa9.11□□□□□ -0.95
NR1I3-231ENST00000512340 DCTPP1Q9H773 170 aa9.11□□□□□ -0.95
NR1I3-231ENST00000512340 PGAP2Q9UHJ9 254 aa9.11□□□□□ -0.95
NR1I3-231ENST00000512340 PPP2R3BQ9Y5P8 575 aa9.11□□□□□ -0.95
NR1I3-231ENST00000512340 A0A1B0GUL6 1792 aa9.11□□□□□ -0.95
NR1I3-231ENST00000512340 SCN9AQ15858 1988 aa9.1□□□□□ -0.95
NR1I3-231ENST00000512340 TMEM88BA6NKF7 163 aa9.1□□□□□ -0.95
NR1I3-231ENST00000512340 ERC2O15083 957 aa9.1□□□□□ -0.95
NR1I3-231ENST00000512340 MAP4K4O95819 1239 aaPredicted RBP9.1□□□□□ -0.95
NR1I3-231ENST00000512340 ADORA1P30542 326 aa9.1□□□□□ -0.95
NR1I3-231ENST00000512340 CRKP46108 304 aa9.1□□□□□ -0.95
NR1I3-231ENST00000512340 SUPT20HL1Q3ZLR7 823 aa9.1□□□□□ -0.95
NR1I3-231ENST00000512340 CERS3Q8IU89 383 aa9.1□□□□□ -0.95
NR1I3-231ENST00000512340 TRPM4Q8TD43 1214 aa9.1□□□□□ -0.95
NR1I3-231ENST00000512340 DBNDD2Q9BQY9 259 aa9.1□□□□□ -0.95
NR1I3-231ENST00000512340 CCDC8Q9H0W5 538 aaPredicted RBP9.1□□□□□ -0.95
NR1I3-231ENST00000512340 IL1RAPL2Q9NP60 686 aa9.1□□□□□ -0.95
NR1I3-231ENST00000512340 GGA3Q9NZ52 723 aa9.1□□□□□ -0.95
NR1I3-231ENST00000512340 RAI14Q9P0K7 980 aa9.1□□□□□ -0.95
NR1I3-231ENST00000512340 JAG2Q9Y219 1238 aa9.1□□□□□ -0.95
NR1I3-231ENST00000512340 SPDYE2BA6NHP3 402 aa9.09□□□□□ -0.95
NR1I3-231ENST00000512340 WNT10BO00744 389 aa9.09□□□□□ -0.95
NR1I3-231ENST00000512340 BAG3O95817 575 aa9.09□□□□□ -0.95
NR1I3-231ENST00000512340 SPDYE6P0CI01 402 aa9.09□□□□□ -0.95
NR1I3-231ENST00000512340 PLCG2P16885 1265 aa9.09□□□□□ -0.95
NR1I3-231ENST00000512340 MAP3K12Q12852 859 aa9.09□□□□□ -0.95
NR1I3-231ENST00000512340 RASGRF1Q13972 1273 aa9.09□□□□□ -0.95
NR1I3-231ENST00000512340 ANGEL2Q5VTE6 544 aaKnown RBP9.09□□□□□ -0.95
NR1I3-231ENST00000512340 USP48Q86UV5 1035 aa9.09□□□□□ -0.95
NR1I3-231ENST00000512340 SIRT2Q8IXJ6 389 aa9.09□□□□□ -0.95
NR1I3-231ENST00000512340 CERS5Q8N5B7 392 aa9.09□□□□□ -0.95
NR1I3-231ENST00000512340 C2orf69Q8N8R5 385 aa9.09□□□□□ -0.95
NR1I3-231ENST00000512340 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.09□□□□□ -0.95
NR1I3-231ENST00000512340 EAF2Q96CJ1 260 aaPredicted RBP9.09□□□□□ -0.95
NR1I3-231ENST00000512340 ZDHHC15Q96MV8 337 aa9.09□□□□□ -0.95
NR1I3-231ENST00000512340 MXD3Q9BW11 206 aa9.09□□□□□ -0.95
NR1I3-231ENST00000512340 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.09□□□□□ -0.95
NR1I3-231ENST00000512340 ABT1Q9ULW3 272 aaKnown RBP9.09□□□□□ -0.95
NR1I3-231ENST00000512340 MYH13Q9UKX3 1938 aa9.09□□□□□ -0.95
NR1I3-231ENST00000512340 POTEIP0CG38 1075 aa9.08□□□□□ -0.96
NR1I3-231ENST00000512340 POTEJP0CG39 1038 aa9.08□□□□□ -0.96
NR1I3-231ENST00000512340 HIRAP54198 1017 aaPredicted RBP9.08□□□□□ -0.96
NR1I3-231ENST00000512340 FKBP1BP68106 108 aa9.08□□□□□ -0.96
NR1I3-231ENST00000512340 MAP2K1Q02750 393 aaPredicted RBP9.08□□□□□ -0.96
NR1I3-231ENST00000512340 FKBP1CQ5VVH2 108 aa9.08□□□□□ -0.96
NR1I3-231ENST00000512340 ZSCAN25Q6NSZ9 544 aa9.08□□□□□ -0.96
NR1I3-231ENST00000512340 ZNF408Q9H9D4 720 aa9.08□□□□□ -0.96
NR1I3-231ENST00000512340 VEZTQ9HBM0 779 aa9.08□□□□□ -0.96
NR1I3-231ENST00000512340 HMG20BQ9P0W2 317 aa9.08□□□□□ -0.96
NR1I3-231ENST00000512340 MKRN1Q9UHC7 482 aaKnown RBP9.08□□□□□ -0.96
NR1I3-231ENST00000512340 DBNLQ9UJU6 430 aaKnown RBP9.08□□□□□ -0.96
NR1I3-231ENST00000512340 PCDHB15Q9Y5E8 787 aa9.08□□□□□ -0.96
NR1I3-231ENST00000512340 PASKQ96RG2 1323 aa9.07□□□□□ -0.96
NR1I3-231ENST00000512340 FOXN1O15353 648 aa9.07□□□□□ -0.96
NR1I3-231ENST00000512340 PPP1R12BO60237 982 aaPredicted RBP9.07□□□□□ -0.96
NR1I3-231ENST00000512340 CELF2O95319 508 aaKnown RBP9.07□□□□□ -0.96
NR1I3-231ENST00000512340 ITGBL1O95965 494 aaPredicted RBP9.07□□□□□ -0.96
NR1I3-231ENST00000512340 ECE1P42892 770 aa9.07□□□□□ -0.96
NR1I3-231ENST00000512340 TTLL12Q14166 644 aaPredicted RBP9.07□□□□□ -0.96
NR1I3-231ENST00000512340 NBPF9Q3BBW0 867 aa9.07□□□□□ -0.96
NR1I3-231ENST00000512340 ANKRD45Q5TZF3 282 aa9.07□□□□□ -0.96
NR1I3-231ENST00000512340 NAA16Q6N069 864 aaPredicted RBP9.07□□□□□ -0.96
NR1I3-231ENST00000512340 ARMC9Q7Z3E5 817 aa9.07□□□□□ -0.96
NR1I3-231ENST00000512340 EXOC6Q8TAG9 804 aa9.07□□□□□ -0.96
NR1I3-231ENST00000512340 GLIS2Q9BZE0 524 aaPredicted RBP9.07□□□□□ -0.96
NR1I3-231ENST00000512340 ECHDC1Q9NTX5 307 aa9.07□□□□□ -0.96
NR1I3-231ENST00000512340 COL1A1P02452 1464 aaPredicted RBP9.07□□□□□ -0.96
NR1I3-231ENST00000512340 ARAP2Q8WZ64 1704 aa9.06□□□□□ -0.96
NR1I3-231ENST00000512340 SHTN1A0MZ66 631 aa9.06□□□□□ -0.96
NR1I3-231ENST00000512340 IDH1O75874 414 aaKnown RBP9.06□□□□□ -0.96
NR1I3-231ENST00000512340 ATP5JP18859 108 aa9.06□□□□□ -0.96
NR1I3-231ENST00000512340 PRDX5P30044 214 aa9.06□□□□□ -0.96
NR1I3-231ENST00000512340 MCAMP43121 646 aa9.06□□□□□ -0.96
NR1I3-231ENST00000512340 SPDYE2Q495Y8 402 aa9.06□□□□□ -0.96
NR1I3-231ENST00000512340 PAXIP1Q6ZW49 1069 aaPredicted RBP9.06□□□□□ -0.96
NR1I3-231ENST00000512340 FAM163AQ96GL9 167 aaPredicted RBP9.06□□□□□ -0.96
NR1I3-231ENST00000512340 PRMT6Q96LA8 375 aaPredicted RBP9.06□□□□□ -0.96
NR1I3-231ENST00000512340 DNAJC2Q99543 621 aaKnown RBP9.06□□□□□ -0.96
NR1I3-231ENST00000512340 DEFB129Q9H1M3 183 aa9.06□□□□□ -0.96
NR1I3-231ENST00000512340 SNRKQ9NRH2 765 aa9.06□□□□□ -0.96
NR1I3-231ENST00000512340 WBP1LQ9NX94 342 aa9.06□□□□□ -0.96
NR1I3-231ENST00000512340 ZNF70Q9UC06 446 aaPredicted RBP9.06□□□□□ -0.96
NR1I3-231ENST00000512340 TTC41PQ6P2S7 1318 aa9.05□□□□□ -0.96
NR1I3-231ENST00000512340 CLRN2A0PK11 232 aa9.05□□□□□ -0.96
NR1I3-231ENST00000512340 UNCXA6NJT0 531 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms