RNA–Protein interactions for RNA: ENST00000512334.5

DDX41-214, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 686 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-214ENST00000512334 HSP90AB4PQ58FF6 505 aa19.58■□□□□ 0.72
DDX41-214ENST00000512334 PRAMEF18Q5VWM3 479 aa19.58■□□□□ 0.72
DDX41-214ENST00000512334 ERC1Q8IUD2 1116 aa19.58■□□□□ 0.72
DDX41-214ENST00000512334 C2orf69Q8N8R5 385 aa19.58■□□□□ 0.72
DDX41-214ENST00000512334 TEKT1Q969V4 418 aa19.58■□□□□ 0.72
DDX41-214ENST00000512334 GBA2Q9HCG7 927 aaPredicted RBP19.58■□□□□ 0.72
DDX41-214ENST00000512334 APBB1O00213 710 aa19.57■□□□□ 0.72
DDX41-214ENST00000512334 GRM1Q13255 1194 aa19.57■□□□□ 0.72
DDX41-214ENST00000512334 SAPCD2Q86UD0 394 aa19.57■□□□□ 0.72
DDX41-214ENST00000512334 SIRT2Q8IXJ6 389 aa19.57■□□□□ 0.72
DDX41-214ENST00000512334 AOX1Q06278 1338 aa19.56■□□□□ 0.72
DDX41-214ENST00000512334 LDHBP07195 334 aaKnown RBP19.56■□□□□ 0.72
DDX41-214ENST00000512334 VEGFBP49765 207 aa19.56■□□□□ 0.72
DDX41-214ENST00000512334 HDLBPQ00341 1268 aaKnown RBP19.56■□□□□ 0.72
DDX41-214ENST00000512334 ZGPATQ8N5A5 531 aaKnown RBP19.56■□□□□ 0.72
DDX41-214ENST00000512334 DBNDD2Q9BQY9 259 aa19.56■□□□□ 0.72
DDX41-214ENST00000512334 TDRD3Q9H7E2 651 aaKnown RBP19.56■□□□□ 0.72
DDX41-214ENST00000512334 SALL1Q9NSC2 1324 aa19.55■□□□□ 0.72
DDX41-214ENST00000512334 PRDX5P30044 214 aa19.55■□□□□ 0.72
DDX41-214ENST00000512334 NF2P35240 595 aa19.55■□□□□ 0.72
DDX41-214ENST00000512334 HUNKP57058 714 aa19.55■□□□□ 0.72
DDX41-214ENST00000512334 CCDC158Q5M9N0 1113 aa19.55■□□□□ 0.72
DDX41-214ENST00000512334 TTC39AQ5SRH9 613 aa19.55■□□□□ 0.72
DDX41-214ENST00000512334 JMYQ8N9B5 988 aa19.55■□□□□ 0.72
DDX41-214ENST00000512334 CCDC8Q9H0W5 538 aaPredicted RBP19.55■□□□□ 0.72
DDX41-214ENST00000512334 BCL11AQ9H165 835 aa19.55■□□□□ 0.72
DDX41-214ENST00000512334 ZNF70Q9UC06 446 aaPredicted RBP19.55■□□□□ 0.72
DDX41-214ENST00000512334 ABCF2Q9UG63 623 aa19.55■□□□□ 0.72
DDX41-214ENST00000512334 PDS5AQ29RF7 1337 aaKnown RBP19.54■□□□□ 0.72
DDX41-214ENST00000512334 UQCRFS1P1P0C7P4 283 aa19.54■□□□□ 0.72
DDX41-214ENST00000512334 ARID4AP29374 1257 aaPredicted RBP19.54■□□□□ 0.72
DDX41-214ENST00000512334 CYP4F22Q6NT55 531 aa19.54■□□□□ 0.72
DDX41-214ENST00000512334 SPATA5Q8NB90 893 aa19.54■□□□□ 0.72
DDX41-214ENST00000512334 DEFB129Q9H1M3 183 aa19.54■□□□□ 0.72
DDX41-214ENST00000512334 WDR33Q9C0J8 1336 aaKnown RBP19.53■□□□□ 0.72
DDX41-214ENST00000512334 ZBTB22O15209 634 aa19.53■□□□□ 0.72
DDX41-214ENST00000512334 ECE1P42892 770 aa19.53■□□□□ 0.72
DDX41-214ENST00000512334 TTLL12Q14166 644 aaPredicted RBP19.53■□□□□ 0.72
DDX41-214ENST00000512334 SPDYE2Q495Y8 402 aa19.53■□□□□ 0.72
DDX41-214ENST00000512334 PI16Q6UXB8 463 aa19.53■□□□□ 0.72
DDX41-214ENST00000512334 AACSQ86V21 672 aa19.53■□□□□ 0.72
DDX41-214ENST00000512334 DZIP1Q86YF9 867 aaKnown RBP19.53■□□□□ 0.72
DDX41-214ENST00000512334 RHPN1Q8TCX5 695 aa19.53■□□□□ 0.72
DDX41-214ENST00000512334 EAF2Q96CJ1 260 aaPredicted RBP19.53■□□□□ 0.72
DDX41-214ENST00000512334 CAPNS2Q96L46 248 aa19.53■□□□□ 0.72
DDX41-214ENST00000512334 ZDHHC15Q96MV8 337 aa19.53■□□□□ 0.72
DDX41-214ENST00000512334 MRIQ9BWK5 157 aa19.53■□□□□ 0.72
DDX41-214ENST00000512334 IL1RAPL2Q9NP60 686 aa19.53■□□□□ 0.72
DDX41-214ENST00000512334 HMG20BQ9P0W2 317 aa19.53■□□□□ 0.72
DDX41-214ENST00000512334 TNFAIP1Q13829 316 aa19.52■□□□□ 0.72
DDX41-214ENST00000512334 DIXDC1Q155Q3 683 aa19.52■□□□□ 0.72
DDX41-214ENST00000512334 SPTY2D1Q68D10 685 aaPredicted RBP19.52■□□□□ 0.72
DDX41-214ENST00000512334 HHIPL2Q6UWX4 724 aa19.52■□□□□ 0.72
DDX41-214ENST00000512334 KIF1BPQ96EK5 621 aa19.52■□□□□ 0.72
DDX41-214ENST00000512334 HHIPL1Q96JK4 782 aa19.52■□□□□ 0.72
DDX41-214ENST00000512334 TLR7Q9NYK1 1049 aaKnown RBP19.52■□□□□ 0.72
DDX41-214ENST00000512334 TMOD2Q9NZR1 351 aa19.52■□□□□ 0.72
DDX41-214ENST00000512334 DBNLQ9UJU6 430 aaKnown RBP19.52■□□□□ 0.72
DDX41-214ENST00000512334 PPP2R3BQ9Y5P8 575 aa19.52■□□□□ 0.72
DDX41-214ENST00000512334 TCP10L2B9ZVM9 353 aa19.51■□□□□ 0.71
DDX41-214ENST00000512334 MCAMP43121 646 aa19.51■□□□□ 0.71
DDX41-214ENST00000512334 ERICH6Q7L0X2 663 aa19.51■□□□□ 0.71
DDX41-214ENST00000512334 CRBNQ96SW2 442 aa19.51■□□□□ 0.71
DDX41-214ENST00000512334 PAPPA2Q9BXP8 1791 aa19.5■□□□□ 0.71
DDX41-214ENST00000512334 RAB11FIP3O75154 756 aa19.5■□□□□ 0.71
DDX41-214ENST00000512334 TNNI2P48788 182 aa19.5■□□□□ 0.71
DDX41-214ENST00000512334 FKBP1BP68106 108 aa19.5■□□□□ 0.71
DDX41-214ENST00000512334 PRKG1Q13976 671 aa19.5■□□□□ 0.71
DDX41-214ENST00000512334 RASA3Q14644 834 aa19.5■□□□□ 0.71
DDX41-214ENST00000512334 APOBEC3HQ6NTF7 200 aaKnown RBP19.5■□□□□ 0.71
DDX41-214ENST00000512334 MOB2Q70IA6 237 aa19.5■□□□□ 0.71
DDX41-214ENST00000512334 CLASRPQ8N2M8 674 aaKnown RBP19.5■□□□□ 0.71
DDX41-214ENST00000512334 SNRKQ9NRH2 765 aa19.5■□□□□ 0.71
DDX41-214ENST00000512334 DAGLAQ9Y4D2 1042 aa19.5■□□□□ 0.71
DDX41-214ENST00000512334 CACNB3P54284 484 aa19.49■□□□□ 0.71
DDX41-214ENST00000512334 RGMBQ6NW40 437 aa19.49■□□□□ 0.71
DDX41-214ENST00000512334 TBC1D9Q6ZT07 1266 aa19.49■□□□□ 0.71
DDX41-214ENST00000512334 ZNF157P51786 506 aaPredicted RBP19.48■□□□□ 0.71
DDX41-214ENST00000512334 SUPT20HL1Q3ZLR7 823 aa19.48■□□□□ 0.71
DDX41-214ENST00000512334 SLF2Q8IX21 1173 aa19.48■□□□□ 0.71
DDX41-214ENST00000512334 RAI14Q9P0K7 980 aa19.48■□□□□ 0.71
DDX41-214ENST00000512334 MYH2Q9UKX2 1941 aa19.48■□□□□ 0.71
DDX41-214ENST00000512334 UBE2Q2LH0YL09 131 aa19.47■□□□□ 0.71
DDX41-214ENST00000512334 AOC2O75106 756 aa19.47■□□□□ 0.71
DDX41-214ENST00000512334 IFIT2P09913 472 aaKnown RBP19.47■□□□□ 0.71
DDX41-214ENST00000512334 NBPF12Q5TAG4 269 aaPredicted RBP19.47■□□□□ 0.71
DDX41-214ENST00000512334 ARMC9Q7Z3E5 817 aa19.47■□□□□ 0.71
DDX41-214ENST00000512334 TMEM39BQ9GZU3 492 aa19.47■□□□□ 0.71
DDX41-214ENST00000512334 LRP2BPQ9P2M1 347 aa19.47■□□□□ 0.71
DDX41-214ENST00000512334 HSPA1AP0DMV8 641 aaKnown RBP19.46■□□□□ 0.71
DDX41-214ENST00000512334 HSPA1BP0DMV9 641 aaKnown RBP19.46■□□□□ 0.71
DDX41-214ENST00000512334 MECOMQ03112 1051 aa19.46■□□□□ 0.71
DDX41-214ENST00000512334 CDC42EP5Q6NZY7 148 aa19.46■□□□□ 0.71
DDX41-214ENST00000512334 ZNF512BQ96KM6 892 aaPredicted RBP19.46■□□□□ 0.71
DDX41-214ENST00000512334 USP40Q9NVE5 1235 aa19.46■□□□□ 0.71
DDX41-214ENST00000512334 ANGEL1Q9UNK9 670 aaKnown RBP19.46■□□□□ 0.71
DDX41-214ENST00000512334 FZD1Q9UP38 647 aa19.46■□□□□ 0.71
DDX41-214ENST00000512334 AKAP11Q9UKA4 1901 aa19.45■□□□□ 0.7
DDX41-214ENST00000512334 PPP1R12BO60237 982 aaPredicted RBP19.45■□□□□ 0.7
DDX41-214ENST00000512334 ZAP70P43403 619 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms