RNA–Protein interactions for RNA: ENST00000512068.1

HTT-209, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-209ENST00000512068 ATP5JP18859 108 aa9.77□□□□□ -0.85
HTT-209ENST00000512068 BAG6P46379 1132 aa9.77□□□□□ -0.85
HTT-209ENST00000512068 PUM3Q15397 648 aaKnown RBP9.77□□□□□ -0.85
HTT-209ENST00000512068 DDX46Q7L014 1031 aaKnown RBP9.77□□□□□ -0.85
HTT-209ENST00000512068 DBNDD2Q9BQY9 259 aa9.77□□□□□ -0.85
HTT-209ENST00000512068 TLR7Q9NYK1 1049 aaKnown RBP9.77□□□□□ -0.85
HTT-209ENST00000512068 RGS17Q9UGC6 210 aaPredicted RBP9.77□□□□□ -0.85
HTT-209ENST00000512068 DBNLQ9UJU6 430 aaKnown RBP9.77□□□□□ -0.85
HTT-209ENST00000512068 LRP5O75197 1615 aa9.77□□□□□ -0.85
HTT-209ENST00000512068 ABCC12Q96J65 1359 aa9.76□□□□□ -0.85
HTT-209ENST00000512068 CHMLP26374 656 aa9.76□□□□□ -0.85
HTT-209ENST00000512068 KCNJ4P48050 445 aa9.76□□□□□ -0.85
HTT-209ENST00000512068 NFIXQ14938 502 aa9.76□□□□□ -0.85
HTT-209ENST00000512068 SF3B3Q15393 1217 aaKnown RBP9.76□□□□□ -0.85
HTT-209ENST00000512068 SLC10A5Q5PT55 438 aa9.76□□□□□ -0.85
HTT-209ENST00000512068 SULF1Q8IWU6 871 aa9.76□□□□□ -0.85
HTT-209ENST00000512068 RPGRQ92834 1020 aaKnown RBP9.76□□□□□ -0.85
HTT-209ENST00000512068 ESYT1Q9BSJ8 1104 aa9.76□□□□□ -0.85
HTT-209ENST00000512068 ANO2Q9NQ90 1003 aa9.76□□□□□ -0.85
HTT-209ENST00000512068 STK32BQ9NY57 414 aa9.76□□□□□ -0.85
HTT-209ENST00000512068 RIPOR2Q9Y4F9 1068 aa9.76□□□□□ -0.85
HTT-209ENST00000512068 RIC1Q4ADV7 1423 aa9.75□□□□□ -0.85
HTT-209ENST00000512068 PDE8BO95263 885 aa9.75□□□□□ -0.85
HTT-209ENST00000512068 GYS1P13807 737 aa9.75□□□□□ -0.85
HTT-209ENST00000512068 TIMM10P62072 90 aa9.75□□□□□ -0.85
HTT-209ENST00000512068 HSCBQ8IWL3 235 aa9.75□□□□□ -0.85
HTT-209ENST00000512068 NLGN1Q8N2Q7 840 aa9.75□□□□□ -0.85
HTT-209ENST00000512068 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.75□□□□□ -0.85
HTT-209ENST00000512068 LPIN2Q92539 896 aa9.75□□□□□ -0.85
HTT-209ENST00000512068 XAGE2Q96GT9 111 aa9.75□□□□□ -0.85
HTT-209ENST00000512068 SEC31BQ9NQW1 1179 aa9.75□□□□□ -0.85
HTT-209ENST00000512068 RAD50Q92878 1312 aa9.75□□□□□ -0.85
HTT-209ENST00000512068 RFX7Q2KHR2 1363 aa9.75□□□□□ -0.85
HTT-209ENST00000512068 ARAP2Q8WZ64 1704 aa9.74□□□□□ -0.85
HTT-209ENST00000512068 EPB41L2O43491 1005 aaKnown RBP9.74□□□□□ -0.85
HTT-209ENST00000512068 SERPINB2P05120 415 aa9.74□□□□□ -0.85
HTT-209ENST00000512068 UQCRFS1P1P0C7P4 283 aa9.74□□□□□ -0.85
HTT-209ENST00000512068 RBM25P49756 843 aaKnown RBP9.74□□□□□ -0.85
HTT-209ENST00000512068 SWT1Q5T5J6 900 aaKnown RBP9.74□□□□□ -0.85
HTT-209ENST00000512068 CWC27Q6UX04 472 aaKnown RBP9.74□□□□□ -0.85
HTT-209ENST00000512068 AMIGO3Q86WK7 504 aa9.74□□□□□ -0.85
HTT-209ENST00000512068 CDAN1Q8IWY9 1227 aa9.74□□□□□ -0.85
HTT-209ENST00000512068 ZFRQ96KR1 1074 aaKnown RBP9.74□□□□□ -0.85
HTT-209ENST00000512068 HAUS7Q99871 368 aa9.74□□□□□ -0.85
HTT-209ENST00000512068 PAG1Q9NWQ8 432 aa9.74□□□□□ -0.85
HTT-209ENST00000512068 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.74□□□□□ -0.85
HTT-209ENST00000512068 GOLIM4O00461 696 aa9.73□□□□□ -0.85
HTT-209ENST00000512068 FKBP4Q02790 459 aaKnown RBP eCLIP9.73□□□□□ -0.85
HTT-209ENST00000512068 CHRNDQ07001 517 aa9.73□□□□□ -0.85
HTT-209ENST00000512068 TTF1Q15361 905 aaPredicted RBP9.73□□□□□ -0.85
HTT-209ENST00000512068 ZNF827Q17R98 1081 aa9.73□□□□□ -0.85
HTT-209ENST00000512068 TICAM2Q86XR7 235 aa9.73□□□□□ -0.85
HTT-209ENST00000512068 VPS37DQ86XT2 251 aa9.73□□□□□ -0.85
HTT-209ENST00000512068 BEGAINQ9BUH8 593 aa9.73□□□□□ -0.85
HTT-209ENST00000512068 ANKRD2Q9GZV1 360 aa9.73□□□□□ -0.85
HTT-209ENST00000512068 GNL3LQ9NVN8 582 aaKnown RBP9.73□□□□□ -0.85
HTT-209ENST00000512068 BSDC1Q9NW68 430 aaPredicted RBP9.73□□□□□ -0.85
HTT-209ENST00000512068 PARP3Q9Y6F1 533 aa9.73□□□□□ -0.85
HTT-209ENST00000512068 DDX11L8A8MPP1 907 aa9.72□□□□□ -0.85
HTT-209ENST00000512068 SGSM2O43147 1006 aa9.72□□□□□ -0.85
HTT-209ENST00000512068 CD46P15529 392 aa9.72□□□□□ -0.85
HTT-209ENST00000512068 ADORA1P30542 326 aa9.72□□□□□ -0.85
HTT-209ENST00000512068 RPS8P62241 208 aaKnown RBP9.72□□□□□ -0.85
HTT-209ENST00000512068 RABEP1Q15276 862 aa9.72□□□□□ -0.85
HTT-209ENST00000512068 CAVIN4Q5BKX8 364 aa9.72□□□□□ -0.85
HTT-209ENST00000512068 PRR5LQ6MZQ0 368 aa9.72□□□□□ -0.85
HTT-209ENST00000512068 ZSCAN25Q6NSZ9 544 aa9.72□□□□□ -0.85
HTT-209ENST00000512068 SAMD7Q7Z3H4 446 aa9.72□□□□□ -0.85
HTT-209ENST00000512068 CCDC24Q8N4L8 307 aa9.72□□□□□ -0.85
HTT-209ENST00000512068 HELBQ8NG08 1087 aaPredicted RBP9.72□□□□□ -0.85
HTT-209ENST00000512068 RBM17Q96I25 401 aaKnown RBP9.72□□□□□ -0.85
HTT-209ENST00000512068 USP26Q9BXU7 913 aa9.72□□□□□ -0.85
HTT-209ENST00000512068 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.72□□□□□ -0.85
HTT-209ENST00000512068 TMX4Q9H1E5 349 aaPredicted RBP9.72□□□□□ -0.85
HTT-209ENST00000512068 MYH7P12883 1935 aa9.72□□□□□ -0.85
HTT-209ENST00000512068 TNRC6CQ9HCJ0 1690 aaKnown RBP9.71□□□□□ -0.85
HTT-209ENST00000512068 QSER1Q2KHR3 1735 aa9.71□□□□□ -0.85
HTT-209ENST00000512068 TAF1P21675 1872 aa9.71□□□□□ -0.85
HTT-209ENST00000512068 TAF5LO75529 589 aa9.71□□□□□ -0.86
HTT-209ENST00000512068 NMIQ13287 307 aaPredicted RBP9.71□□□□□ -0.86
HTT-209ENST00000512068 GRAPQ13588 217 aa9.71□□□□□ -0.86
HTT-209ENST00000512068 UBE4AQ14139 1066 aa9.71□□□□□ -0.86
HTT-209ENST00000512068 EZH2Q15910 746 aaKnown RBP9.71□□□□□ -0.86
HTT-209ENST00000512068 COL23A1Q86Y22 540 aaPredicted RBP9.71□□□□□ -0.86
HTT-209ENST00000512068 VGLL2Q8N8G2 317 aa9.71□□□□□ -0.86
HTT-209ENST00000512068 KBTBD3Q8NAB2 608 aa9.71□□□□□ -0.86
HTT-209ENST00000512068 GRAPLQ8TC17 118 aaPredicted RBP9.71□□□□□ -0.86
HTT-209ENST00000512068 A0A1B0GUL6 1792 aa9.7□□□□□ -0.86
HTT-209ENST00000512068 MYH13Q9UKX3 1938 aa9.7□□□□□ -0.86
HTT-209ENST00000512068 POLRMTO00411 1230 aaKnown RBP9.7□□□□□ -0.86
HTT-209ENST00000512068 FRAT2O75474 233 aaPredicted RBP9.7□□□□□ -0.86
HTT-209ENST00000512068 ZFYP08048 801 aaPredicted RBP9.7□□□□□ -0.86
HTT-209ENST00000512068 TM4SF1P30408 202 aa9.7□□□□□ -0.86
HTT-209ENST00000512068 SLC15A2Q16348 729 aa9.7□□□□□ -0.86
HTT-209ENST00000512068 RNF20Q5VTR2 975 aa9.7□□□□□ -0.86
HTT-209ENST00000512068 CCDC102BQ68D86 513 aa9.7□□□□□ -0.86
HTT-209ENST00000512068 SLF2Q8IX21 1173 aa9.7□□□□□ -0.86
HTT-209ENST00000512068 CELF1Q92879 486 aaKnown RBP9.7□□□□□ -0.86
HTT-209ENST00000512068 ZNF512BQ96KM6 892 aaPredicted RBP9.7□□□□□ -0.86
HTT-209ENST00000512068 GOPCQ9HD26 462 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms