RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 G3BP1Q13283 466 aaKnown RBP eCLIP20.42■□□□□ 0.86
DDX41-213ENST00000512027 TTLL12Q14166 644 aaPredicted RBP20.42■□□□□ 0.86
DDX41-213ENST00000512027 SSH3Q8TE77 659 aa20.42■□□□□ 0.86
DDX41-213ENST00000512027 AIDAQ96BJ3 306 aa20.42■□□□□ 0.86
DDX41-213ENST00000512027 XAGE2Q96GT9 111 aa20.42■□□□□ 0.86
DDX41-213ENST00000512027 ZNF70Q9UC06 446 aaPredicted RBP20.42■□□□□ 0.86
DDX41-213ENST00000512027 COG6Q9Y2V7 657 aa20.42■□□□□ 0.86
DDX41-213ENST00000512027 PRDX5P30044 214 aa20.41■□□□□ 0.86
DDX41-213ENST00000512027 SPDYE2Q495Y8 402 aa20.41■□□□□ 0.86
DDX41-213ENST00000512027 NEUROD6Q96NK8 337 aa20.41■□□□□ 0.86
DDX41-213ENST00000512027 CACNB3P54284 484 aa20.4■□□□□ 0.86
DDX41-213ENST00000512027 MAP2K1Q02750 393 aaPredicted RBP20.4■□□□□ 0.86
DDX41-213ENST00000512027 RASGRF1Q13972 1273 aa20.4■□□□□ 0.86
DDX41-213ENST00000512027 CEP85Q6P2H3 762 aa20.4■□□□□ 0.86
DDX41-213ENST00000512027 CDAN1Q8IWY9 1227 aa20.4■□□□□ 0.86
DDX41-213ENST00000512027 WDR66Q8TBY9 1149 aa20.4■□□□□ 0.86
DDX41-213ENST00000512027 GNL3LQ9NVN8 582 aaKnown RBP20.4■□□□□ 0.86
DDX41-213ENST00000512027 TSKSQ9UJT2 592 aa20.4■□□□□ 0.86
DDX41-213ENST00000512027 AKAP2Q9Y2D5 859 aa20.4■□□□□ 0.86
DDX41-213ENST00000512027 OTOFQ9HC10 1997 aa20.39■□□□□ 0.86
DDX41-213ENST00000512027 TCP10L2B9ZVM9 353 aa20.39■□□□□ 0.85
DDX41-213ENST00000512027 SURF6O75683 361 aaKnown RBP20.39■□□□□ 0.85
DDX41-213ENST00000512027 NF2P35240 595 aa20.39■□□□□ 0.85
DDX41-213ENST00000512027 MAP2K2P36507 400 aa20.39■□□□□ 0.85
DDX41-213ENST00000512027 FKBP1BP68106 108 aa20.39■□□□□ 0.85
DDX41-213ENST00000512027 OS9Q13438 667 aaPredicted RBP20.39■□□□□ 0.85
DDX41-213ENST00000512027 RASA3Q14644 834 aa20.39■□□□□ 0.85
DDX41-213ENST00000512027 MVPQ14764 893 aaKnown RBP20.39■□□□□ 0.85
DDX41-213ENST00000512027 DIXDC1Q155Q3 683 aa20.39■□□□□ 0.85
DDX41-213ENST00000512027 C20orf194Q5TEA3 1177 aa20.39■□□□□ 0.85
DDX41-213ENST00000512027 RASAL3Q86YV0 1011 aa20.39■□□□□ 0.85
DDX41-213ENST00000512027 TEKT1Q969V4 418 aa20.39■□□□□ 0.85
DDX41-213ENST00000512027 YTHDC1Q96MU7 727 aaKnown RBP20.39■□□□□ 0.85
DDX41-213ENST00000512027 MYH2Q9UKX2 1941 aa20.39■□□□□ 0.85
DDX41-213ENST00000512027 SLC10A3P09131 477 aa20.38■□□□□ 0.85
DDX41-213ENST00000512027 NOGQ13253 232 aa20.38■□□□□ 0.85
DDX41-213ENST00000512027 NBPF12Q5TAG4 269 aaPredicted RBP20.38■□□□□ 0.85
DDX41-213ENST00000512027 PI16Q6UXB8 463 aa20.38■□□□□ 0.85
DDX41-213ENST00000512027 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.38■□□□□ 0.85
DDX41-213ENST00000512027 DENND2AQ9ULE3 1009 aa20.38■□□□□ 0.85
DDX41-213ENST00000512027 HSPA8P11142 646 aaKnown RBP20.37■□□□□ 0.85
DDX41-213ENST00000512027 LBX1P52954 281 aa20.37■□□□□ 0.85
DDX41-213ENST00000512027 HDLBPQ00341 1268 aaKnown RBP20.37■□□□□ 0.85
DDX41-213ENST00000512027 ANGEL1Q9UNK9 670 aaKnown RBP20.37■□□□□ 0.85
DDX41-213ENST00000512027 MAST3O60307 1309 aa20.36■□□□□ 0.85
DDX41-213ENST00000512027 SEMA3EO15041 775 aa20.36■□□□□ 0.85
DDX41-213ENST00000512027 MS4A1P11836 297 aa20.36■□□□□ 0.85
DDX41-213ENST00000512027 CTCFP49711 727 aaPredicted RBP20.36■□□□□ 0.85
DDX41-213ENST00000512027 KIF23Q02241 960 aaPredicted RBP20.36■□□□□ 0.85
DDX41-213ENST00000512027 APOBEC3HQ6NTF7 200 aaKnown RBP20.36■□□□□ 0.85
DDX41-213ENST00000512027 CCDC102AQ96A19 550 aa20.36■□□□□ 0.85
DDX41-213ENST00000512027 ZDHHC15Q96MV8 337 aa20.36■□□□□ 0.85
DDX41-213ENST00000512027 TMEM39BQ9GZU3 492 aa20.36■□□□□ 0.85
DDX41-213ENST00000512027 SUGT1Q9Y2Z0 365 aa20.36■□□□□ 0.85
DDX41-213ENST00000512027 PPP2R3BQ9Y5P8 575 aa20.36■□□□□ 0.85
DDX41-213ENST00000512027 SALL1Q9NSC2 1324 aa20.35■□□□□ 0.85
DDX41-213ENST00000512027 LDHBP07195 334 aaKnown RBP20.35■□□□□ 0.85
DDX41-213ENST00000512027 MKRN3Q13064 507 aaKnown RBP20.35■□□□□ 0.85
DDX41-213ENST00000512027 DAGLAQ9Y4D2 1042 aa20.35■□□□□ 0.85
DDX41-213ENST00000512027 AKAP11Q9UKA4 1901 aa20.34■□□□□ 0.85
DDX41-213ENST00000512027 TNNI3KQ59H18 835 aa20.34■□□□□ 0.85
DDX41-213ENST00000512027 GORABQ5T7V8 394 aa20.34■□□□□ 0.85
DDX41-213ENST00000512027 ARMC9Q7Z3E5 817 aa20.34■□□□□ 0.85
DDX41-213ENST00000512027 DBNDD2Q9BQY9 259 aa20.34■□□□□ 0.85
DDX41-213ENST00000512027 BEGAINQ9BUH8 593 aa20.34■□□□□ 0.85
DDX41-213ENST00000512027 ABCF2Q9UG63 623 aa20.34■□□□□ 0.85
DDX41-213ENST00000512027 EXOC6BQ9Y2D4 811 aa20.34■□□□□ 0.85
DDX41-213ENST00000512027 NOP58Q9Y2X3 529 aaKnown RBP20.34■□□□□ 0.85
DDX41-213ENST00000512027 FPGT-TNNI3KV9GXZ4 949 aa20.34■□□□□ 0.85
DDX41-213ENST00000512027 MYO5AQ9Y4I1 1855 aaKnown RBP20.34■□□□□ 0.85
DDX41-213ENST00000512027 TNFAIP1Q13829 316 aa20.33■□□□□ 0.85
DDX41-213ENST00000512027 HHIPL2Q6UWX4 724 aa20.33■□□□□ 0.85
DDX41-213ENST00000512027 CLMNQ96JQ2 1002 aa20.33■□□□□ 0.85
DDX41-213ENST00000512027 TEPSINQ96N21 525 aa20.33■□□□□ 0.85
DDX41-213ENST00000512027 TLR7Q9NYK1 1049 aaKnown RBP20.33■□□□□ 0.85
DDX41-213ENST00000512027 HMG20BQ9P0W2 317 aa20.33■□□□□ 0.85
DDX41-213ENST00000512027 DDX19BQ9UMR2 479 aa20.33■□□□□ 0.85
DDX41-213ENST00000512027 MRIQ9BWK5 157 aa20.32■□□□□ 0.84
DDX41-213ENST00000512027 ZBTB40Q9NUA8 1239 aa20.32■□□□□ 0.84
DDX41-213ENST00000512027 PDS5AQ29RF7 1337 aaKnown RBP20.31■□□□□ 0.84
DDX41-213ENST00000512027 ARID4AP29374 1257 aaPredicted RBP20.31■□□□□ 0.84
DDX41-213ENST00000512027 MCAMP43121 646 aa20.31■□□□□ 0.84
DDX41-213ENST00000512027 SUPT20HL1Q3ZLR7 823 aa20.31■□□□□ 0.84
DDX41-213ENST00000512027 LDLRAD1Q5T700 205 aa20.31■□□□□ 0.84
DDX41-213ENST00000512027 TBC1D9Q6ZT07 1266 aa20.31■□□□□ 0.84
DDX41-213ENST00000512027 SIRT2Q8IXJ6 389 aa20.31■□□□□ 0.84
DDX41-213ENST00000512027 SPATA5Q8NB90 893 aa20.31■□□□□ 0.84
DDX41-213ENST00000512027 CCDC8Q9H0W5 538 aaPredicted RBP20.31■□□□□ 0.84
DDX41-213ENST00000512027 GPR108Q9NPR9 543 aa20.31■□□□□ 0.84
DDX41-213ENST00000512027 AK9Q5TCS8 1911 aa20.31■□□□□ 0.84
DDX41-213ENST00000512027 USP2O75604 605 aaPredicted RBP20.3■□□□□ 0.84
DDX41-213ENST00000512027 TNNI2P48788 182 aa20.3■□□□□ 0.84
DDX41-213ENST00000512027 CDC42EP5Q6NZY7 148 aa20.3■□□□□ 0.84
DDX41-213ENST00000512027 CSRNP1Q96S65 589 aa20.3■□□□□ 0.84
DDX41-213ENST00000512027 SNRKQ9NRH2 765 aa20.3■□□□□ 0.84
DDX41-213ENST00000512027 TMOD2Q9NZR1 351 aa20.3■□□□□ 0.84
DDX41-213ENST00000512027 CASP8AP2Q9UKL3 1982 aa20.3■□□□□ 0.84
DDX41-213ENST00000512027 ZBTB22O15209 634 aa20.29■□□□□ 0.84
DDX41-213ENST00000512027 PPP1R12BO60237 982 aaPredicted RBP20.29■□□□□ 0.84
DDX41-213ENST00000512027 NFIAQ12857 509 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms