RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.83□□□□□ -0.04
RNF4-216ENST00000511859 TEPSINQ96N21 525 aa14.83□□□□□ -0.04
RNF4-216ENST00000511859 SERPINA10Q9UK55 444 aa14.83□□□□□ -0.04
RNF4-216ENST00000511859 AOX1Q06278 1338 aa14.82□□□□□ -0.04
RNF4-216ENST00000511859 CAPN2P17655 700 aa14.82□□□□□ -0.04
RNF4-216ENST00000511859 GRK4P32298 578 aa14.82□□□□□ -0.04
RNF4-216ENST00000511859 CWF19L2Q2TBE0 894 aaKnown RBP14.82□□□□□ -0.04
RNF4-216ENST00000511859 SRRDQ9UH36 339 aa14.82□□□□□ -0.04
RNF4-216ENST00000511859 ANKRD18BA2A2Z9 1011 aa14.81□□□□□ -0.04
RNF4-216ENST00000511859 SPDYE5A6NIY4 337 aa14.81□□□□□ -0.04
RNF4-216ENST00000511859 BTBD19C9JJ37 291 aa14.81□□□□□ -0.04
RNF4-216ENST00000511859 SNAP23O00161 211 aa14.81□□□□□ -0.04
RNF4-216ENST00000511859 ZBTB7BO15156 539 aaPredicted RBP14.81□□□□□ -0.04
RNF4-216ENST00000511859 TAF5LO75529 589 aa14.81□□□□□ -0.04
RNF4-216ENST00000511859 SNAPC2Q13487 334 aa14.81□□□□□ -0.04
RNF4-216ENST00000511859 WDR43Q15061 677 aaKnown RBP eCLIP14.81□□□□□ -0.04
RNF4-216ENST00000511859 C17orf99Q6UX52 265 aa14.81□□□□□ -0.04
RNF4-216ENST00000511859 ERO1BQ86YB8 467 aa14.81□□□□□ -0.04
RNF4-216ENST00000511859 C8orf58Q8NAV2 365 aa14.81□□□□□ -0.04
RNF4-216ENST00000511859 RAET1EQ8TD07 263 aa14.81□□□□□ -0.04
RNF4-216ENST00000511859 TRIM47Q96LD4 638 aa14.81□□□□□ -0.04
RNF4-216ENST00000511859 TDRD3Q9H7E2 651 aaKnown RBP14.81□□□□□ -0.04
RNF4-216ENST00000511859 PSMC4P43686 418 aa14.8□□□□□ -0.04
RNF4-216ENST00000511859 UBXN2AP68543 259 aa14.8□□□□□ -0.04
RNF4-216ENST00000511859 GCKRQ14397 625 aa14.8□□□□□ -0.04
RNF4-216ENST00000511859 RNF208Q9H0X6 261 aa14.8□□□□□ -0.04
RNF4-216ENST00000511859 TTF2Q9UNY4 1162 aaKnown RBP14.8□□□□□ -0.04
RNF4-216ENST00000511859 RIPOR2Q9Y4F9 1068 aa14.8□□□□□ -0.04
RNF4-216ENST00000511859 ZSWIM8A7E2V4 1837 aa14.8□□□□□ -0.04
RNF4-216ENST00000511859 FAM205AQ6ZU69 1335 aa14.79□□□□□ -0.04
RNF4-216ENST00000511859 TCP10L2B9ZVM9 353 aa14.79□□□□□ -0.04
RNF4-216ENST00000511859 CCL5P13501 91 aa14.79□□□□□ -0.04
RNF4-216ENST00000511859 GPR153Q6NV75 609 aa14.79□□□□□ -0.04
RNF4-216ENST00000511859 DZIP1LQ8IYY4 767 aaKnown RBP14.79□□□□□ -0.04
RNF4-216ENST00000511859 TMEM39BQ9GZU3 492 aa14.79□□□□□ -0.04
RNF4-216ENST00000511859 ADAMTS8Q9UP79 889 aa14.79□□□□□ -0.04
RNF4-216ENST00000511859 UNC80Q8N2C7 3258 aa14.79□□□□□ -0.04
RNF4-216ENST00000511859 IRF6O14896 467 aa14.78□□□□□ -0.04
RNF4-216ENST00000511859 FMNL1O95466 1100 aaPredicted RBP14.78□□□□□ -0.04
RNF4-216ENST00000511859 OSBPP22059 807 aa14.78□□□□□ -0.04
RNF4-216ENST00000511859 IFIT5Q13325 482 aaKnown RBP14.78□□□□□ -0.04
RNF4-216ENST00000511859 MFSD14BQ5SR56 506 aa14.78□□□□□ -0.04
RNF4-216ENST00000511859 HOOK2Q96ED9 719 aa14.78□□□□□ -0.04
RNF4-216ENST00000511859 STK31Q9BXU1 1019 aa14.78□□□□□ -0.04
RNF4-216ENST00000511859 MYH16Q9H6N6 1097 aa14.78□□□□□ -0.04
RNF4-216ENST00000511859 BIN2Q9UBW5 565 aaPredicted RBP14.78□□□□□ -0.04
RNF4-216ENST00000511859 JAG2Q9Y219 1238 aa14.78□□□□□ -0.04
RNF4-216ENST00000511859 EVI5O60447 810 aa14.77□□□□□ -0.04
RNF4-216ENST00000511859 CASP7P55210 303 aa14.77□□□□□ -0.04
RNF4-216ENST00000511859 PPIL2Q13356 520 aa14.77□□□□□ -0.04
RNF4-216ENST00000511859 CDAN1Q8IWY9 1227 aa14.77□□□□□ -0.04
RNF4-216ENST00000511859 SNCAIPQ9Y6H5 919 aa14.77□□□□□ -0.04
RNF4-216ENST00000511859 FARP2O94887 1054 aaPredicted RBP14.76□□□□□ -0.05
RNF4-216ENST00000511859 SGPL1O95470 568 aa14.76□□□□□ -0.05
RNF4-216ENST00000511859 CTGFP29279 349 aa14.76□□□□□ -0.05
RNF4-216ENST00000511859 CRKP46108 304 aa14.76□□□□□ -0.05
RNF4-216ENST00000511859 PPATQ06203 517 aa14.76□□□□□ -0.05
RNF4-216ENST00000511859 ANKRD23Q86SG2 305 aa14.76□□□□□ -0.05
RNF4-216ENST00000511859 TDRD7Q8NHU6 1098 aaKnown RBP14.76□□□□□ -0.05
RNF4-216ENST00000511859 U2AF1L4Q8WU68 220 aaKnown RBP14.76□□□□□ -0.05
RNF4-216ENST00000511859 CPA4Q9UI42 421 aa14.76□□□□□ -0.05
RNF4-216ENST00000511859 MYPNQ86TC9 1320 aa14.76□□□□□ -0.05
RNF4-216ENST00000511859 ARAP2Q8WZ64 1704 aa14.76□□□□□ -0.05
RNF4-216ENST00000511859 SOX1O00570 391 aaPredicted RBP14.75□□□□□ -0.05
RNF4-216ENST00000511859 HDLBPQ00341 1268 aaKnown RBP14.75□□□□□ -0.05
RNF4-216ENST00000511859 ZKSCAN4Q969J2 545 aaPredicted RBP14.75□□□□□ -0.05
RNF4-216ENST00000511859 LRCH3Q96II8 777 aa14.75□□□□□ -0.05
RNF4-216ENST00000511859 WRNIP1Q96S55 665 aa14.75□□□□□ -0.05
RNF4-216ENST00000511859 MYBBP1AQ9BQG0 1328 aaKnown RBP14.75□□□□□ -0.05
RNF4-216ENST00000511859 HIBADHP31937 336 aaKnown RBP14.74□□□□□ -0.05
RNF4-216ENST00000511859 FAM83AQ86UY5 434 aa14.74□□□□□ -0.05
RNF4-216ENST00000511859 TSPYL6Q8N831 410 aa14.74□□□□□ -0.05
RNF4-216ENST00000511859 SLAIN1Q8ND83 568 aa14.74□□□□□ -0.05
RNF4-216ENST00000511859 STAP2Q9UGK3 403 aa14.74□□□□□ -0.05
RNF4-216ENST00000511859 PDHXO00330 501 aa14.73□□□□□ -0.05
RNF4-216ENST00000511859 ECM2O94769 699 aaPredicted RBP14.73□□□□□ -0.05
RNF4-216ENST00000511859 SLC4A2P04920 1241 aa14.73□□□□□ -0.05
RNF4-216ENST00000511859 BMP8BP34820 402 aa14.73□□□□□ -0.05
RNF4-216ENST00000511859 FKBP1CQ5VVH2 108 aa14.73□□□□□ -0.05
RNF4-216ENST00000511859 DCAF15Q66K64 600 aa14.73□□□□□ -0.05
RNF4-216ENST00000511859 LDHAL6AQ6ZMR3 332 aa14.73□□□□□ -0.05
RNF4-216ENST00000511859 LINS1Q8NG48 757 aa14.73□□□□□ -0.05
RNF4-216ENST00000511859 A0A1B0GUL6 1792 aa14.73□□□□□ -0.05
RNF4-216ENST00000511859 CACNA1FO60840 1977 aa14.73□□□□□ -0.05
RNF4-216ENST00000511859 MGAMO43451 1857 aa14.73□□□□□ -0.05
RNF4-216ENST00000511859 PLIN1O60240 522 aa14.73□□□□□ -0.05
RNF4-216ENST00000511859 TFRCP02786 760 aaKnown RBP14.73□□□□□ -0.05
RNF4-216ENST00000511859 ZEB1P37275 1124 aaPredicted RBP14.73□□□□□ -0.05
RNF4-216ENST00000511859 FCGRTP55899 365 aa14.73□□□□□ -0.05
RNF4-216ENST00000511859 UBE4AQ14139 1066 aa14.73□□□□□ -0.05
RNF4-216ENST00000511859 CCDC57Q2TAC2 916 aa14.73□□□□□ -0.05
RNF4-216ENST00000511859 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.73□□□□□ -0.05
RNF4-216ENST00000511859 MRIQ9BWK5 157 aa14.73□□□□□ -0.05
RNF4-216ENST00000511859 APAF1O14727 1248 aa14.72□□□□□ -0.05
RNF4-216ENST00000511859 FOXO4P98177 505 aa14.72□□□□□ -0.05
RNF4-216ENST00000511859 G2E3Q7L622 706 aa14.72□□□□□ -0.05
RNF4-216ENST00000511859 DNAAF4Q8WXU2 420 aa14.72□□□□□ -0.05
RNF4-216ENST00000511859 FAM84BQ96KN1 310 aaPredicted RBP14.72□□□□□ -0.05
RNF4-216ENST00000511859 ZNF341Q9BYN7 854 aa14.72□□□□□ -0.05
RNF4-216ENST00000511859 UNC93B1Q9H1C4 597 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms