RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 SERPINA10Q9UK55 444 aa16.48■□□□□ 0.23
RNF4-215ENST00000511843 A0A1B0GUL7 405 aa16.47■□□□□ 0.23
RNF4-215ENST00000511843 MYO1BO43795 1136 aa16.47■□□□□ 0.23
RNF4-215ENST00000511843 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.47■□□□□ 0.23
RNF4-215ENST00000511843 ZNF70Q9UC06 446 aaPredicted RBP16.47■□□□□ 0.23
RNF4-215ENST00000511843 RCAN3Q9UKA8 241 aa16.47■□□□□ 0.23
RNF4-215ENST00000511843 AK9Q5TCS8 1911 aa16.47■□□□□ 0.23
RNF4-215ENST00000511843 MYO5AQ9Y4I1 1855 aaKnown RBP16.46■□□□□ 0.23
RNF4-215ENST00000511843 MAP2K2P36507 400 aa16.46■□□□□ 0.23
RNF4-215ENST00000511843 LBX1P52954 281 aa16.46■□□□□ 0.23
RNF4-215ENST00000511843 CACNB3P54284 484 aa16.46■□□□□ 0.23
RNF4-215ENST00000511843 ATP8B2P98198 1209 aa16.46■□□□□ 0.23
RNF4-215ENST00000511843 G3BP1Q13283 466 aaKnown RBP eCLIP16.46■□□□□ 0.23
RNF4-215ENST00000511843 POLA2Q14181 598 aa16.46■□□□□ 0.23
RNF4-215ENST00000511843 CCDC102BQ68D86 513 aa16.46■□□□□ 0.23
RNF4-215ENST00000511843 XAGE2Q96GT9 111 aa16.46■□□□□ 0.23
RNF4-215ENST00000511843 CASP8AP2Q9UKL3 1982 aa16.46■□□□□ 0.22
RNF4-215ENST00000511843 TCP10L2B9ZVM9 353 aa16.45■□□□□ 0.22
RNF4-215ENST00000511843 SLC10A3P09131 477 aa16.45■□□□□ 0.22
RNF4-215ENST00000511843 HSPA8P11142 646 aaKnown RBP16.45■□□□□ 0.22
RNF4-215ENST00000511843 PRDX5P30044 214 aa16.45■□□□□ 0.22
RNF4-215ENST00000511843 NF2P35240 595 aa16.45■□□□□ 0.22
RNF4-215ENST00000511843 CTCFP49711 727 aaPredicted RBP16.45■□□□□ 0.22
RNF4-215ENST00000511843 NOGQ13253 232 aa16.45■□□□□ 0.22
RNF4-215ENST00000511843 SPDYE2Q495Y8 402 aa16.45■□□□□ 0.22
RNF4-215ENST00000511843 RASAL3Q86YV0 1011 aa16.45■□□□□ 0.22
RNF4-215ENST00000511843 CDAN1Q8IWY9 1227 aa16.45■□□□□ 0.22
RNF4-215ENST00000511843 SSH3Q8TE77 659 aa16.45■□□□□ 0.22
RNF4-215ENST00000511843 TEKT1Q969V4 418 aa16.45■□□□□ 0.22
RNF4-215ENST00000511843 NEUROD6Q96NK8 337 aa16.45■□□□□ 0.22
RNF4-215ENST00000511843 GNL3LQ9NVN8 582 aaKnown RBP16.45■□□□□ 0.22
RNF4-215ENST00000511843 FKBP1BP68106 108 aa16.44■□□□□ 0.22
RNF4-215ENST00000511843 KIF23Q02241 960 aaPredicted RBP16.44■□□□□ 0.22
RNF4-215ENST00000511843 RASGRF1Q13972 1273 aa16.44■□□□□ 0.22
RNF4-215ENST00000511843 RASA3Q14644 834 aa16.44■□□□□ 0.22
RNF4-215ENST00000511843 DIXDC1Q155Q3 683 aa16.44■□□□□ 0.22
RNF4-215ENST00000511843 NBPF12Q5TAG4 269 aaPredicted RBP16.44■□□□□ 0.22
RNF4-215ENST00000511843 WDR66Q8TBY9 1149 aa16.44■□□□□ 0.22
RNF4-215ENST00000511843 ANGEL1Q9UNK9 670 aaKnown RBP16.44■□□□□ 0.22
RNF4-215ENST00000511843 COG6Q9Y2V7 657 aa16.44■□□□□ 0.22
RNF4-215ENST00000511843 SURF6O75683 361 aaKnown RBP16.43■□□□□ 0.22
RNF4-215ENST00000511843 MKRN3Q13064 507 aaKnown RBP16.43■□□□□ 0.22
RNF4-215ENST00000511843 OS9Q13438 667 aaPredicted RBP16.43■□□□□ 0.22
RNF4-215ENST00000511843 C20orf194Q5TEA3 1177 aa16.43■□□□□ 0.22
RNF4-215ENST00000511843 PI16Q6UXB8 463 aa16.43■□□□□ 0.22
RNF4-215ENST00000511843 CCDC102AQ96A19 550 aa16.43■□□□□ 0.22
RNF4-215ENST00000511843 BEGAINQ9BUH8 593 aa16.43■□□□□ 0.22
RNF4-215ENST00000511843 TMEM39BQ9GZU3 492 aa16.43■□□□□ 0.22
RNF4-215ENST00000511843 AKAP2Q9Y2D5 859 aa16.43■□□□□ 0.22
RNF4-215ENST00000511843 HDLBPQ00341 1268 aaKnown RBP16.42■□□□□ 0.22
RNF4-215ENST00000511843 MVPQ14764 893 aaKnown RBP16.42■□□□□ 0.22
RNF4-215ENST00000511843 APOBEC3HQ6NTF7 200 aaKnown RBP16.42■□□□□ 0.22
RNF4-215ENST00000511843 CEP85Q6P2H3 762 aa16.42■□□□□ 0.22
RNF4-215ENST00000511843 ZDHHC15Q96MV8 337 aa16.42■□□□□ 0.22
RNF4-215ENST00000511843 DENND2AQ9ULE3 1009 aa16.42■□□□□ 0.22
RNF4-215ENST00000511843 PPP2R3BQ9Y5P8 575 aa16.42■□□□□ 0.22
RNF4-215ENST00000511843 MAST3O60307 1309 aa16.42■□□□□ 0.22
RNF4-215ENST00000511843 SEMA3EO15041 775 aa16.41■□□□□ 0.22
RNF4-215ENST00000511843 LDHBP07195 334 aaKnown RBP16.41■□□□□ 0.22
RNF4-215ENST00000511843 GORABQ5T7V8 394 aa16.41■□□□□ 0.22
RNF4-215ENST00000511843 ARMC9Q7Z3E5 817 aa16.41■□□□□ 0.22
RNF4-215ENST00000511843 TNS4Q8IZW8 715 aa16.41■□□□□ 0.22
RNF4-215ENST00000511843 YTHDC1Q96MU7 727 aaKnown RBP16.41■□□□□ 0.22
RNF4-215ENST00000511843 SUGT1Q9Y2Z0 365 aa16.41■□□□□ 0.22
RNF4-215ENST00000511843 DAGLAQ9Y4D2 1042 aa16.41■□□□□ 0.22
RNF4-215ENST00000511843 CLMNQ96JQ2 1002 aa16.4■□□□□ 0.22
RNF4-215ENST00000511843 TEPSINQ96N21 525 aa16.4■□□□□ 0.22
RNF4-215ENST00000511843 CSRNP1Q96S65 589 aa16.4■□□□□ 0.22
RNF4-215ENST00000511843 ABCF2Q9UG63 623 aa16.4■□□□□ 0.22
RNF4-215ENST00000511843 SALL1Q9NSC2 1324 aa16.4■□□□□ 0.22
RNF4-215ENST00000511843 LAMB1P07942 1786 aa16.39■□□□□ 0.21
RNF4-215ENST00000511843 TNFAIP1Q13829 316 aa16.39■□□□□ 0.21
RNF4-215ENST00000511843 SUPT20HL1Q3ZLR7 823 aa16.39■□□□□ 0.21
RNF4-215ENST00000511843 TNNI3KQ59H18 835 aa16.39■□□□□ 0.21
RNF4-215ENST00000511843 LDLRAD1Q5T700 205 aa16.39■□□□□ 0.21
RNF4-215ENST00000511843 HHIPL2Q6UWX4 724 aa16.39■□□□□ 0.21
RNF4-215ENST00000511843 DBNDD2Q9BQY9 259 aa16.39■□□□□ 0.21
RNF4-215ENST00000511843 PRDM10Q9NQV6 1147 aa16.39■□□□□ 0.21
RNF4-215ENST00000511843 HMG20BQ9P0W2 317 aa16.39■□□□□ 0.21
RNF4-215ENST00000511843 EXOC6BQ9Y2D4 811 aa16.39■□□□□ 0.21
RNF4-215ENST00000511843 FPGT-TNNI3KV9GXZ4 949 aa16.39■□□□□ 0.21
RNF4-215ENST00000511843 DOCK2Q92608 1830 aa16.38■□□□□ 0.21
RNF4-215ENST00000511843 USP2O75604 605 aaPredicted RBP16.38■□□□□ 0.21
RNF4-215ENST00000511843 MS4A1P11836 297 aa16.38■□□□□ 0.21
RNF4-215ENST00000511843 IFFO2Q5TF58 517 aa16.38■□□□□ 0.21
RNF4-215ENST00000511843 TBC1D9Q6ZT07 1266 aa16.38■□□□□ 0.21
RNF4-215ENST00000511843 MRIQ9BWK5 157 aa16.38■□□□□ 0.21
RNF4-215ENST00000511843 TLR7Q9NYK1 1049 aaKnown RBP16.38■□□□□ 0.21
RNF4-215ENST00000511843 MAST2Q6P0Q8 1798 aa16.38■□□□□ 0.21
RNF4-215ENST00000511843 PPP1R12BO60237 982 aaPredicted RBP16.37■□□□□ 0.21
RNF4-215ENST00000511843 ARID4AP29374 1257 aaPredicted RBP16.37■□□□□ 0.21
RNF4-215ENST00000511843 MCAMP43121 646 aa16.37■□□□□ 0.21
RNF4-215ENST00000511843 TNNI2P48788 182 aa16.37■□□□□ 0.21
RNF4-215ENST00000511843 CDC42EP5Q6NZY7 148 aa16.37■□□□□ 0.21
RNF4-215ENST00000511843 DZIP1Q86YF9 867 aaKnown RBP16.37■□□□□ 0.21
RNF4-215ENST00000511843 SNRKQ9NRH2 765 aa16.37■□□□□ 0.21
RNF4-215ENST00000511843 TMOD2Q9NZR1 351 aa16.37■□□□□ 0.21
RNF4-215ENST00000511843 NOP58Q9Y2X3 529 aaKnown RBP16.37■□□□□ 0.21
RNF4-215ENST00000511843 CDK5RAP2Q96SN8 1893 aa16.37■□□□□ 0.21
RNF4-215ENST00000511843 APBB1O00213 710 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms