RNA–Protein interactions for RNA: ENST00000511586.5

PDLIM5-215, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-215ENST00000511586 ZBED3Q96IU2 234 aaPredicted RBP8.77□□□□□ -1.01
PDLIM5-215ENST00000511586 ZNF512BQ96KM6 892 aaPredicted RBP8.77□□□□□ -1.01
PDLIM5-215ENST00000511586 PRMT6Q96LA8 375 aaPredicted RBP8.77□□□□□ -1.01
PDLIM5-215ENST00000511586 LRRCC1Q9C099 1032 aa8.77□□□□□ -1.01
PDLIM5-215ENST00000511586 DCTPP1Q9H773 170 aa8.77□□□□□ -1.01
PDLIM5-215ENST00000511586 CREBZFQ9NS37 354 aa8.77□□□□□ -1.01
PDLIM5-215ENST00000511586 HMG20BQ9P0W2 317 aa8.77□□□□□ -1.01
PDLIM5-215ENST00000511586 DBNLQ9UJU6 430 aaKnown RBP8.77□□□□□ -1.01
PDLIM5-215ENST00000511586 COL1A1P02452 1464 aaPredicted RBP8.77□□□□□ -1.01
PDLIM5-215ENST00000511586 ZNF646O15015 1829 aaPredicted RBP8.76□□□□□ -1.01
PDLIM5-215ENST00000511586 TMEM88BA6NKF7 163 aa8.76□□□□□ -1.01
PDLIM5-215ENST00000511586 ADM5C9JUS6 153 aa8.76□□□□□ -1.01
PDLIM5-215ENST00000511586 IFIT2P09913 472 aaKnown RBP8.76□□□□□ -1.01
PDLIM5-215ENST00000511586 PRDX5P30044 214 aa8.76□□□□□ -1.01
PDLIM5-215ENST00000511586 MCAMP43121 646 aa8.76□□□□□ -1.01
PDLIM5-215ENST00000511586 FMR1Q06787 632 aaKnown RBP eCLIP8.76□□□□□ -1.01
PDLIM5-215ENST00000511586 SPTY2D1Q68D10 685 aaPredicted RBP8.76□□□□□ -1.01
PDLIM5-215ENST00000511586 APOBEC3FQ8IUX4 373 aaKnown RBP8.76□□□□□ -1.01
PDLIM5-215ENST00000511586 ZDHHC15Q96MV8 337 aa8.76□□□□□ -1.01
PDLIM5-215ENST00000511586 BCL11AQ9H165 835 aa8.76□□□□□ -1.01
PDLIM5-215ENST00000511586 ZNF408Q9H9D4 720 aa8.76□□□□□ -1.01
PDLIM5-215ENST00000511586 TLR7Q9NYK1 1049 aaKnown RBP8.76□□□□□ -1.01
PDLIM5-215ENST00000511586 ABCF2Q9UG63 623 aa8.76□□□□□ -1.01
PDLIM5-215ENST00000511586 PCDHAC2Q9Y5I4 1007 aa8.76□□□□□ -1.01
PDLIM5-215ENST00000511586 ARAP2Q8WZ64 1704 aa8.75□□□□□ -1.01
PDLIM5-215ENST00000511586 CELF2O95319 508 aaKnown RBP8.75□□□□□ -1.01
PDLIM5-215ENST00000511586 HTRA3P83110 453 aa8.75□□□□□ -1.01
PDLIM5-215ENST00000511586 HDAC1Q13547 482 aaPredicted RBP8.75□□□□□ -1.01
PDLIM5-215ENST00000511586 CST9Q5W186 159 aa8.75□□□□□ -1.01
PDLIM5-215ENST00000511586 HHIPL2Q6UWX4 724 aa8.75□□□□□ -1.01
PDLIM5-215ENST00000511586 ERICH6Q7L0X2 663 aa8.75□□□□□ -1.01
PDLIM5-215ENST00000511586 DZIP1Q86YF9 867 aaKnown RBP8.75□□□□□ -1.01
PDLIM5-215ENST00000511586 SLF2Q8IX21 1173 aa8.75□□□□□ -1.01
PDLIM5-215ENST00000511586 EXOC6Q8TAG9 804 aa8.75□□□□□ -1.01
PDLIM5-215ENST00000511586 TDRD3Q9H7E2 651 aaKnown RBP8.75□□□□□ -1.01
PDLIM5-215ENST00000511586 CLRN2A0PK11 232 aa8.74□□□□□ -1.01
PDLIM5-215ENST00000511586 SPDYE2Q495Y8 402 aa8.74□□□□□ -1.01
PDLIM5-215ENST00000511586 APOBEC3HQ6NTF7 200 aaKnown RBP8.74□□□□□ -1.01
PDLIM5-215ENST00000511586 PI16Q6UXB8 463 aa8.74□□□□□ -1.01
PDLIM5-215ENST00000511586 DLK2Q6UY11 383 aa8.74□□□□□ -1.01
PDLIM5-215ENST00000511586 TBC1D9Q6ZT07 1266 aa8.74□□□□□ -1.01
PDLIM5-215ENST00000511586 CDCA5Q96FF9 252 aa8.74□□□□□ -1.01
PDLIM5-215ENST00000511586 DEFB129Q9H1M3 183 aa8.74□□□□□ -1.01
PDLIM5-215ENST00000511586 RWDD1Q9H446 243 aaPredicted RBP8.74□□□□□ -1.01
PDLIM5-215ENST00000511586 SNRKQ9NRH2 765 aa8.74□□□□□ -1.01
PDLIM5-215ENST00000511586 LRP2BPQ9P2M1 347 aa8.74□□□□□ -1.01
PDLIM5-215ENST00000511586 ZNF70Q9UC06 446 aaPredicted RBP8.74□□□□□ -1.01
PDLIM5-215ENST00000511586 ABT1Q9ULW3 272 aaKnown RBP8.74□□□□□ -1.01
PDLIM5-215ENST00000511586 SCAF8Q9UPN6 1271 aaKnown RBP8.74□□□□□ -1.01
PDLIM5-215ENST00000511586 PPP2R3BQ9Y5P8 575 aa8.74□□□□□ -1.01
PDLIM5-215ENST00000511586 SMARCA5O60264 1052 aaPredicted RBP8.73□□□□□ -1.01
PDLIM5-215ENST00000511586 IGSF3O75054 1194 aa8.73□□□□□ -1.01
PDLIM5-215ENST00000511586 CYP2E1P05181 493 aaPredicted RBP8.73□□□□□ -1.01
PDLIM5-215ENST00000511586 NF2P35240 595 aa8.73□□□□□ -1.01
PDLIM5-215ENST00000511586 ZAP70P43403 619 aa8.73□□□□□ -1.01
PDLIM5-215ENST00000511586 GSTO1P78417 241 aa8.73□□□□□ -1.01
PDLIM5-215ENST00000511586 MECOMQ03112 1051 aa8.73□□□□□ -1.01
PDLIM5-215ENST00000511586 TNFAIP1Q13829 316 aa8.73□□□□□ -1.01
PDLIM5-215ENST00000511586 DIXDC1Q155Q3 683 aa8.73□□□□□ -1.01
PDLIM5-215ENST00000511586 DNAJC5GQ8N7S2 189 aa8.73□□□□□ -1.01
PDLIM5-215ENST00000511586 C2orf69Q8N8R5 385 aa8.73□□□□□ -1.01
PDLIM5-215ENST00000511586 GCC1Q96CN9 775 aa8.73□□□□□ -1.01
PDLIM5-215ENST00000511586 FAM163AQ96GL9 167 aaPredicted RBP8.73□□□□□ -1.01
PDLIM5-215ENST00000511586 VEZTQ9HBM0 779 aa8.73□□□□□ -1.01
PDLIM5-215ENST00000511586 TMOD2Q9NZR1 351 aa8.73□□□□□ -1.01
PDLIM5-215ENST00000511586 RAI14Q9P0K7 980 aa8.73□□□□□ -1.01
PDLIM5-215ENST00000511586 ZBTB47Q9UFB7 747 aaPredicted RBP8.73□□□□□ -1.01
PDLIM5-215ENST00000511586 DAGLAQ9Y4D2 1042 aa8.73□□□□□ -1.01
PDLIM5-215ENST00000511586 AOX1Q06278 1338 aa8.73□□□□□ -1.01
PDLIM5-215ENST00000511586 TCP10L2B9ZVM9 353 aa8.72□□□□□ -1.01
PDLIM5-215ENST00000511586 LDHCP07864 332 aa8.72□□□□□ -1.01
PDLIM5-215ENST00000511586 ATP5JP18859 108 aa8.72□□□□□ -1.01
PDLIM5-215ENST00000511586 TNNI2P48788 182 aa8.72□□□□□ -1.01
PDLIM5-215ENST00000511586 IRX6P78412 446 aaPredicted RBP8.72□□□□□ -1.01
PDLIM5-215ENST00000511586 RASA3Q14644 834 aa8.72□□□□□ -1.01
PDLIM5-215ENST00000511586 DEFB115Q30KQ5 88 aa8.72□□□□□ -1.01
PDLIM5-215ENST00000511586 SUPT20HL1Q3ZLR7 823 aa8.72□□□□□ -1.01
PDLIM5-215ENST00000511586 FKBP1CQ5VVH2 108 aa8.72□□□□□ -1.01
PDLIM5-215ENST00000511586 PRAMEF18Q5VWM3 479 aa8.72□□□□□ -1.01
PDLIM5-215ENST00000511586 SAPCD2Q86UD0 394 aa8.72□□□□□ -1.01
PDLIM5-215ENST00000511586 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.72□□□□□ -1.01
PDLIM5-215ENST00000511586 NSUN4Q96CB9 384 aaKnown RBP8.72□□□□□ -1.01
PDLIM5-215ENST00000511586 GBA2Q9HCG7 927 aaPredicted RBP8.72□□□□□ -1.01
PDLIM5-215ENST00000511586 TLL2Q9Y6L7 1015 aa8.72□□□□□ -1.01
PDLIM5-215ENST00000511586 GAKO14976 1311 aa8.72□□□□□ -1.01
PDLIM5-215ENST00000511586 GPR75-ASB3A0A0A6YYF3 556 aa8.71□□□□□ -1.02
PDLIM5-215ENST00000511586 RASSF10A6NK89 507 aa8.71□□□□□ -1.02
PDLIM5-215ENST00000511586 FKBP1BP68106 108 aa8.71□□□□□ -1.02
PDLIM5-215ENST00000511586 MAP3K12Q12852 859 aa8.71□□□□□ -1.02
PDLIM5-215ENST00000511586 TTF1Q15361 905 aaPredicted RBP8.71□□□□□ -1.02
PDLIM5-215ENST00000511586 ANKRD45Q5TZF3 282 aa8.71□□□□□ -1.02
PDLIM5-215ENST00000511586 NAA16Q6N069 864 aaPredicted RBP8.71□□□□□ -1.02
PDLIM5-215ENST00000511586 CDC42EP5Q6NZY7 148 aa8.71□□□□□ -1.02
PDLIM5-215ENST00000511586 FAM83AQ86UY5 434 aa8.71□□□□□ -1.02
PDLIM5-215ENST00000511586 PIAS4Q8N2W9 510 aaPredicted RBP8.71□□□□□ -1.02
PDLIM5-215ENST00000511586 ZNF384Q8TF68 577 aa8.71□□□□□ -1.02
PDLIM5-215ENST00000511586 KLRG1Q96E93 195 aa8.71□□□□□ -1.02
PDLIM5-215ENST00000511586 GPATCH3Q96I76 525 aa8.71□□□□□ -1.02
PDLIM5-215ENST00000511586 HHIPL1Q96JK4 782 aa8.71□□□□□ -1.02
PDLIM5-215ENST00000511586 BOLA2Q9H3K6 86 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms